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The map label for this gene is ygjG [C]

Identifier: 86748616

GI number: 86748616

Start: 1681613

End: 1683004

Strand: Reverse

Name: ygjG [C]

Synonym: RPB_1491

Alternate gene names: 86748616

Gene position: 1683004-1681613 (Counterclockwise)

Preceding gene: 86748617

Following gene: 86748615

Centisome position: 31.57

GC content: 62.79

Gene sequence:

>1392_bases
ATGAACGAGACCATCCTCAGCAAAGAACTTCGCGAACTCGATATCCAGCATTTGTTCCACCCCTACACCAACCCTCGCCA
GCACGAGCAGGTCGGGCCGGTCGTGATCGAGCGCGGCGAAGGCGTGTTCGTCTACGACACCAACGGACAACGCTATCTCG
AAGCGCTGGCCGGCCTCTGGAGCGTGGCGGTTGGATTCGGCGAGCCGCGCCTGGTCGAAGCCGCGGCGAAGCAGATGTCG
ATGCTGCCGTTCTATCATCTGTTCGCGCACAAATCGCACTCGCCGGGGATCAGGCTCGCGGACAAGCTCTGCGCGATGGC
GCCGGGCCAATTGAGCCACGTGCTGTTTTCGAATTCCGGCTCGGAAGCCAACGACTCCGTCGTGAAGCTGGTCTGGTTCT
ACAACAACAGCCTCGGACGCCCCGAGAAGAAGAAGTTCATCGCCCGCAAGAACGGATATCACGGCATCACCGTGGCGTCC
GGAAGCCTGACCGGCCTGCCGGCGAACCACAACGCGTTCGACCTGCCGAAAATCCCGGTGATCCATCTCGAATGCCCGCA
TTATTATCGCTTCGGCCTTGAAGGCGAATCCGAGCAGCAGTTCACCGATCGGCTGATCAAGCAGCTCGAAGACACCATCG
TCGCCGAAGGCCCCGACACGATCGCGGCGTTCATCGGCGAACCGGTGATGGGCGCCGGCGGCGTCATCGTTCCACCGGTC
GGTTACTGGCCCCGGGTGCAGGAAGTCTGCCGCAAATACGACGTGTTGCTGGTCGTCGACGAGGTCATCACCGGCTTCGG
CCGCCTGGGCACGATGTTCGCCTCCGAGCATTACGGGGTCGAGCCCGACATTTTGGTCGTGTCCAAGCAGATCACCTCGT
CCTATCAGCCGCTCGGCGCGGTGATTTTTTCCGAGAAGCTGTATCAGGGCATCGCCGACAAGGCCGGCGCGTTGGGCACC
TTCGCGCACGGCCTGACGGCCGGCGGCCATCCGGTCGCGACCGCGGTGGCGCTGGAGAACCTCGCCATCATCGAGGAGCG
AGGCCTGGTGGCGAATGCCAAGGAGGTCGGCGCCTATATGCGTGAAGGCCTCGGCGCCTTCGCGTCCCATCCGATGGTCG
GCGAGGTTCGCGGCGACGGAATGATCGCCGCCGTCGAACTGGTCGCCGACAAGGCTTCGAAGCGCAAATTCGATCCCGTC
GGCAAGGTCGGCGCCTATCTGTCCGGGCGCAGCCACGAACACGGGCTGATCGCGCGCAATCTCGGCGACACCTTCGCGTT
CTGTCCGCCGATGATCATCACCAAGAGCGAGATCGACCTGATGCTCTCGATGTTCTCGAAGGCGCTGGACGACACTTACA
CATGGGCGAAGAGCCAAGGTCTCGCAACGTGA

Upstream 100 bases:

>100_bases
GCCTTCGACACGCCGGACGGCGTGGCGAGCCTGGCGACATGACGAACTGGCGGGCCGCGCCGCCGGCTTCAACACCTTTC
GACCTGAATGAAAGAACACC

Downstream 100 bases:

>100_bases
GGCGATAGCGCTTCTCTTCCATCGGCGAATTCCACGCGCCTGCGCGGACGCTTCTTGCACCGCATCTCCGGGAGCACCGC
AACGGCGGTCTCCCGGCATG

Product: aminotransferase

Products: L-Glutamate; L-Glutamate 5-semialdehyde [C]

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MNETILSKELRELDIQHLFHPYTNPRQHEQVGPVVIERGEGVFVYDTNGQRYLEALAGLWSVAVGFGEPRLVEAAAKQMS
MLPFYHLFAHKSHSPGIRLADKLCAMAPGQLSHVLFSNSGSEANDSVVKLVWFYNNSLGRPEKKKFIARKNGYHGITVAS
GSLTGLPANHNAFDLPKIPVIHLECPHYYRFGLEGESEQQFTDRLIKQLEDTIVAEGPDTIAAFIGEPVMGAGGVIVPPV
GYWPRVQEVCRKYDVLLVVDEVITGFGRLGTMFASEHYGVEPDILVVSKQITSSYQPLGAVIFSEKLYQGIADKAGALGT
FAHGLTAGGHPVATAVALENLAIIEERGLVANAKEVGAYMREGLGAFASHPMVGEVRGDGMIAAVELVADKASKRKFDPV
GKVGAYLSGRSHEHGLIARNLGDTFAFCPPMIITKSEIDLMLSMFSKALDDTYTWAKSQGLAT

Sequences:

>Translated_463_residues
MNETILSKELRELDIQHLFHPYTNPRQHEQVGPVVIERGEGVFVYDTNGQRYLEALAGLWSVAVGFGEPRLVEAAAKQMS
MLPFYHLFAHKSHSPGIRLADKLCAMAPGQLSHVLFSNSGSEANDSVVKLVWFYNNSLGRPEKKKFIARKNGYHGITVAS
GSLTGLPANHNAFDLPKIPVIHLECPHYYRFGLEGESEQQFTDRLIKQLEDTIVAEGPDTIAAFIGEPVMGAGGVIVPPV
GYWPRVQEVCRKYDVLLVVDEVITGFGRLGTMFASEHYGVEPDILVVSKQITSSYQPLGAVIFSEKLYQGIADKAGALGT
FAHGLTAGGHPVATAVALENLAIIEERGLVANAKEVGAYMREGLGAFASHPMVGEVRGDGMIAAVELVADKASKRKFDPV
GKVGAYLSGRSHEHGLIARNLGDTFAFCPPMIITKSEIDLMLSMFSKALDDTYTWAKSQGLAT
>Mature_463_residues
MNETILSKELRELDIQHLFHPYTNPRQHEQVGPVVIERGEGVFVYDTNGQRYLEALAGLWSVAVGFGEPRLVEAAAKQMS
MLPFYHLFAHKSHSPGIRLADKLCAMAPGQLSHVLFSNSGSEANDSVVKLVWFYNNSLGRPEKKKFIARKNGYHGITVAS
GSLTGLPANHNAFDLPKIPVIHLECPHYYRFGLEGESEQQFTDRLIKQLEDTIVAEGPDTIAAFIGEPVMGAGGVIVPPV
GYWPRVQEVCRKYDVLLVVDEVITGFGRLGTMFASEHYGVEPDILVVSKQITSSYQPLGAVIFSEKLYQGIADKAGALGT
FAHGLTAGGHPVATAVALENLAIIEERGLVANAKEVGAYMREGLGAFASHPMVGEVRGDGMIAAVELVADKASKRKFDPV
GKVGAYLSGRSHEHGLIARNLGDTFAFCPPMIITKSEIDLMLSMFSKALDDTYTWAKSQGLAT

Specific function: Unknown

COG id: COG0161

COG function: function code H; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI13994255, Length=442, Percent_Identity=29.8642533936652, Blast_Score=176, Evalue=3e-44,
Organism=Homo sapiens, GI37574042, Length=428, Percent_Identity=29.2056074766355, Blast_Score=153, Evalue=3e-37,
Organism=Homo sapiens, GI226442705, Length=428, Percent_Identity=29.2056074766355, Blast_Score=147, Evalue=2e-35,
Organism=Homo sapiens, GI4557809, Length=441, Percent_Identity=26.984126984127, Blast_Score=147, Evalue=3e-35,
Organism=Homo sapiens, GI24119277, Length=435, Percent_Identity=28.735632183908, Blast_Score=139, Evalue=4e-33,
Organism=Homo sapiens, GI226442709, Length=397, Percent_Identity=29.2191435768262, Blast_Score=135, Evalue=6e-32,
Organism=Homo sapiens, GI284507298, Length=335, Percent_Identity=28.0597014925373, Blast_Score=122, Evalue=8e-28,
Organism=Homo sapiens, GI188536080, Length=449, Percent_Identity=22.71714922049, Blast_Score=92, Evalue=9e-19,
Organism=Homo sapiens, GI38679950, Length=449, Percent_Identity=22.71714922049, Blast_Score=92, Evalue=9e-19,
Organism=Homo sapiens, GI38679946, Length=449, Percent_Identity=22.71714922049, Blast_Score=92, Evalue=9e-19,
Organism=Escherichia coli, GI145693181, Length=412, Percent_Identity=31.3106796116505, Blast_Score=179, Evalue=5e-46,
Organism=Escherichia coli, GI1786991, Length=446, Percent_Identity=29.5964125560538, Blast_Score=164, Evalue=2e-41,
Organism=Escherichia coli, GI1789016, Length=436, Percent_Identity=29.1284403669725, Blast_Score=160, Evalue=1e-40,
Organism=Escherichia coli, GI1788044, Length=421, Percent_Identity=29.2161520190024, Blast_Score=150, Evalue=2e-37,
Organism=Escherichia coli, GI1789759, Length=423, Percent_Identity=28.8416075650118, Blast_Score=143, Evalue=3e-35,
Organism=Escherichia coli, GI1787560, Length=424, Percent_Identity=28.3018867924528, Blast_Score=129, Evalue=3e-31,
Organism=Escherichia coli, GI1786349, Length=349, Percent_Identity=24.6418338108883, Blast_Score=89, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI32564660, Length=449, Percent_Identity=31.1804008908686, Blast_Score=167, Evalue=1e-41,
Organism=Caenorhabditis elegans, GI25144271, Length=429, Percent_Identity=29.6037296037296, Blast_Score=167, Evalue=1e-41,
Organism=Caenorhabditis elegans, GI25144274, Length=247, Percent_Identity=34.0080971659919, Blast_Score=132, Evalue=3e-31,
Organism=Caenorhabditis elegans, GI71992977, Length=378, Percent_Identity=26.1904761904762, Blast_Score=131, Evalue=6e-31,
Organism=Caenorhabditis elegans, GI17541228, Length=464, Percent_Identity=22.198275862069, Blast_Score=91, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6323470, Length=461, Percent_Identity=27.9826464208243, Blast_Score=157, Evalue=5e-39,
Organism=Saccharomyces cerevisiae, GI6324386, Length=468, Percent_Identity=28.4188034188034, Blast_Score=136, Evalue=9e-33,
Organism=Saccharomyces cerevisiae, GI6324432, Length=436, Percent_Identity=26.3761467889908, Blast_Score=114, Evalue=4e-26,
Organism=Saccharomyces cerevisiae, GI6321456, Length=355, Percent_Identity=23.0985915492958, Blast_Score=84, Evalue=4e-17,
Organism=Drosophila melanogaster, GI21357415, Length=436, Percent_Identity=28.8990825688073, Blast_Score=164, Evalue=9e-41,
Organism=Drosophila melanogaster, GI28574759, Length=453, Percent_Identity=30.4635761589404, Blast_Score=164, Evalue=1e-40,
Organism=Drosophila melanogaster, GI161085790, Length=450, Percent_Identity=29.7777777777778, Blast_Score=161, Evalue=9e-40,
Organism=Drosophila melanogaster, GI21356575, Length=437, Percent_Identity=28.604118993135, Blast_Score=148, Evalue=6e-36,
Organism=Drosophila melanogaster, GI281366494, Length=446, Percent_Identity=22.8699551569507, Blast_Score=89, Evalue=7e-18,
Organism=Drosophila melanogaster, GI24667139, Length=446, Percent_Identity=22.8699551569507, Blast_Score=89, Evalue=7e-18,
Organism=Drosophila melanogaster, GI24667143, Length=446, Percent_Identity=22.8699551569507, Blast_Score=89, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005814
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00202 Aminotran_3 [H]

EC number: 2.6.1.13 [C]

Molecular weight: Translated: 50338; Mature: 50338

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: PS00600 AA_TRANSFER_CLASS_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNETILSKELRELDIQHLFHPYTNPRQHEQVGPVVIERGEGVFVYDTNGQRYLEALAGLW
CCCHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCEEEECCCEEEEEECCCHHHHHHHHHHH
SVAVGFGEPRLVEAAAKQMSMLPFYHLFAHKSHSPGIRLADKLCAMAPGQLSHVLFSNSG
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEECCC
SEANDSVVKLVWFYNNSLGRPEKKKFIARKNGYHGITVASGSLTGLPANHNAFDLPKIPV
CCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCEEEEECCCEECCCCCCCCCCCCCCCE
IHLECPHYYRFGLEGESEQQFTDRLIKQLEDTIVAEGPDTIAAFIGEPVMGAGGVIVPPV
EEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCEEECCC
GYWPRVQEVCRKYDVLLVVDEVITGFGRLGTMFASEHYGVEPDILVVSKQITSSYQPLGA
CCCHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHCCCCHHHH
VIFSEKLYQGIADKAGALGTFAHGLTAGGHPVATAVALENLAIIEERGLVANAKEVGAYM
HHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
REGLGAFASHPMVGEVRGDGMIAAVELVADKASKRKFDPVGKVGAYLSGRSHEHGLIARN
HHHHHHHHCCCCEEEECCCCEEEHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCEEECC
LGDTFAFCPPMIITKSEIDLMLSMFSKALDDTYTWAKSQGLAT
CCCCHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNETILSKELRELDIQHLFHPYTNPRQHEQVGPVVIERGEGVFVYDTNGQRYLEALAGLW
CCCHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCEEEECCCEEEEEECCCHHHHHHHHHHH
SVAVGFGEPRLVEAAAKQMSMLPFYHLFAHKSHSPGIRLADKLCAMAPGQLSHVLFSNSG
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEECCC
SEANDSVVKLVWFYNNSLGRPEKKKFIARKNGYHGITVASGSLTGLPANHNAFDLPKIPV
CCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCEEEEECCCEECCCCCCCCCCCCCCCE
IHLECPHYYRFGLEGESEQQFTDRLIKQLEDTIVAEGPDTIAAFIGEPVMGAGGVIVPPV
EEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCEEECCC
GYWPRVQEVCRKYDVLLVVDEVITGFGRLGTMFASEHYGVEPDILVVSKQITSSYQPLGA
CCCHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHCCCCHHHH
VIFSEKLYQGIADKAGALGTFAHGLTAGGHPVATAVALENLAIIEERGLVANAKEVGAYM
HHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
REGLGAFASHPMVGEVRGDGMIAAVELVADKASKRKFDPVGKVGAYLSGRSHEHGLIARN
HHHHHHHHCCCCEEEECCCCEEEHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCEEECC
LGDTFAFCPPMIITKSEIDLMLSMFSKALDDTYTWAKSQGLAT
CCCCHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Pyridoxal Phosphate. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 2-Oxoglutarate; Ornithine [C]

Specific reaction: 2-Oxoglutarate + Ornithine --> L-Glutamate + L-Glutamate 5-semialdehyde [C]

General reaction: Amino group transfer [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8796346; 9163424 [H]