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The map label for this gene is atoS [C]

Identifier: 86748578

GI number: 86748578

Start: 1640969

End: 1642444

Strand: Reverse

Name: atoS [C]

Synonym: RPB_1453

Alternate gene names: 86748578

Gene position: 1642444-1640969 (Counterclockwise)

Preceding gene: 86748582

Following gene: 86748576

Centisome position: 30.81

GC content: 68.09

Gene sequence:

>1476_bases
ATGGAGCTCATCGGCTTCTGCTACGCGCAATCGCGATGGTGGCGGATCGGCCTGGCGCTGTGCATCGTGCTGGCCGGGAT
CGCCATCCGGGTCGCCCTGCACGATTCGCTCGGCGATGGCCTCACCTTCGTCACCCTGTACCCCGCCGTCGCCGCCGCCG
CCATGCTCGGCGGCGCTGCGGCCGGAGTGACCGCGACGATCGTGGCGACGGCATCGACGCAACTCATGGTTGCTTCGCTC
GGCCGCGCTGACAACCTGCTCGGGCTCGTCGTCTTTCTGTGCGGCTGCATCGTCATCGTCGCGATGGCCCAGGCGATGCG
CGTGTTTCACGCCCGCCTGATCGAAGCCGCCGAGATCGGCGAAAGCGAGCGGCAGCTCCGCCGCTTCGTCGAGGGGGTGC
CCGCCGCGATCGCCATGTTCGACTGCAACATGCGCTATCTCGCCGCCAGCACGCGCTGGCTGTCCGCCTTCCACCCGACC
GAATCCGTCATCGGCCGATTGCACTACGACGTGTTTCCGAACATTCGCGAGGAGTGGCGGGAAGCGCATCGGCGTGGCCT
CGCCGGCGAGGTGGTGCGCAACAACGAAGACTGCCACGATCGCGCCGACGGCGTGAAGCGATGGGTCAGATGGGAGGTGG
CGCCGTGGCGCGACAGCCGCGGCGAGATCGGGGGAATCACCATCTATTTCGAAGACATCACCGAGAACAGGGCGATGACG
GAGCGACTGGCGCAGGCGCAGCAGCTCGAGACCGTCGGCCGGTTGTCCGGCGCCATCGCCCACGACTTCAACAACCTGCT
CACCGTGATCGTCGGCAACGCCGAGCTGCTCCGCGAGCAGCTCGAGCCGCACGAGGATTTGAGGCAACTGGCCGAGCATA
TCAGCAGCGCCGGTGACCGGGCGGCCGAACTGACCCAGCGTTTGCTGGCGTTCGGCCGACGCCAGATCCTCGCCCCGGTG
GCGGTCGATCTGAACTGGCTGGTGCAGTCGGTCGCCCAGATCGGAGCGGCTTCCGCGCGTCGCGGCGTCAAGATCAGGAC
CGTGCTGGAGCCGGCGCGGCCCCTCGTCCGCGCCGACCGGCTGCAGCTCGAATCCGCCATCCTCAACATCCTGATCAACG
CCCAGGAAGCGGTCGCGGACGACAGCGGCCGGATCGCGATCGTCACCGGCCTGGTCGTGTTCGGCGACCGGCAGGACCAG
GTCCGGCCCGGCCGCTACGGCGTGGTCGAGATCACCGACAACGGCGTCGGCATGAGCGAACGGGTCCGCGGCCAGGCGTT
CGAGCCGTTCTTCACCACCAAGGAATTCGGCACCGCGAGCGGACTGGGGTTGAGCATGGTGTATGGCTTCGTGAAACAGT
CCGACGGGCACGTCACGATCGACAGCCAGCCCGGCGTCGGCACCACGATCCGGCTGTTTCTGCCCCTGGCGAACCCGACA
CCGTCCGACGGCGACGCGGCACCATCGGGCGCGTGA

Upstream 100 bases:

>100_bases
AAGATTCGAAACGCAGCCCGCAGCCGGCCGCAGATGAATTACCTTGATTGATCGCTCCTCCCATTACAGGTCTCATCGCC
ATCCGGCGATAGACAAACTG

Downstream 100 bases:

>100_bases
GCGGCGAAAGCGCCCCGATCAGCTGACCTGGCGGGCGCGCGCCGGCATCGGGTCCGGTGATGGCGCGAGGCCGACCAGAA
CCGGATATTGATCGATCGGC

Product: signal transduction histidine kinase, nitrogen specific, NtrB

Products: NA

Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]

Number of amino acids: Translated: 491; Mature: 491

Protein sequence:

>491_residues
MELIGFCYAQSRWWRIGLALCIVLAGIAIRVALHDSLGDGLTFVTLYPAVAAAAMLGGAAAGVTATIVATASTQLMVASL
GRADNLLGLVVFLCGCIVIVAMAQAMRVFHARLIEAAEIGESERQLRRFVEGVPAAIAMFDCNMRYLAASTRWLSAFHPT
ESVIGRLHYDVFPNIREEWREAHRRGLAGEVVRNNEDCHDRADGVKRWVRWEVAPWRDSRGEIGGITIYFEDITENRAMT
ERLAQAQQLETVGRLSGAIAHDFNNLLTVIVGNAELLREQLEPHEDLRQLAEHISSAGDRAAELTQRLLAFGRRQILAPV
AVDLNWLVQSVAQIGAASARRGVKIRTVLEPARPLVRADRLQLESAILNILINAQEAVADDSGRIAIVTGLVVFGDRQDQ
VRPGRYGVVEITDNGVGMSERVRGQAFEPFFTTKEFGTASGLGLSMVYGFVKQSDGHVTIDSQPGVGTTIRLFLPLANPT
PSDGDAAPSGA

Sequences:

>Translated_491_residues
MELIGFCYAQSRWWRIGLALCIVLAGIAIRVALHDSLGDGLTFVTLYPAVAAAAMLGGAAAGVTATIVATASTQLMVASL
GRADNLLGLVVFLCGCIVIVAMAQAMRVFHARLIEAAEIGESERQLRRFVEGVPAAIAMFDCNMRYLAASTRWLSAFHPT
ESVIGRLHYDVFPNIREEWREAHRRGLAGEVVRNNEDCHDRADGVKRWVRWEVAPWRDSRGEIGGITIYFEDITENRAMT
ERLAQAQQLETVGRLSGAIAHDFNNLLTVIVGNAELLREQLEPHEDLRQLAEHISSAGDRAAELTQRLLAFGRRQILAPV
AVDLNWLVQSVAQIGAASARRGVKIRTVLEPARPLVRADRLQLESAILNILINAQEAVADDSGRIAIVTGLVVFGDRQDQ
VRPGRYGVVEITDNGVGMSERVRGQAFEPFFTTKEFGTASGLGLSMVYGFVKQSDGHVTIDSQPGVGTTIRLFLPLANPT
PSDGDAAPSGA
>Mature_491_residues
MELIGFCYAQSRWWRIGLALCIVLAGIAIRVALHDSLGDGLTFVTLYPAVAAAAMLGGAAAGVTATIVATASTQLMVASL
GRADNLLGLVVFLCGCIVIVAMAQAMRVFHARLIEAAEIGESERQLRRFVEGVPAAIAMFDCNMRYLAASTRWLSAFHPT
ESVIGRLHYDVFPNIREEWREAHRRGLAGEVVRNNEDCHDRADGVKRWVRWEVAPWRDSRGEIGGITIYFEDITENRAMT
ERLAQAQQLETVGRLSGAIAHDFNNLLTVIVGNAELLREQLEPHEDLRQLAEHISSAGDRAAELTQRLLAFGRRQILAPV
AVDLNWLVQSVAQIGAASARRGVKIRTVLEPARPLVRADRLQLESAILNILINAQEAVADDSGRIAIVTGLVVFGDRQDQ
VRPGRYGVVEITDNGVGMSERVRGQAFEPFFTTKEFGTASGLGLSMVYGFVKQSDGHVTIDSQPGVGTTIRLFLPLANPT
PSDGDAAPSGA

Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=282, Percent_Identity=32.9787234042553, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1790436, Length=256, Percent_Identity=28.90625, Blast_Score=98, Evalue=1e-21,
Organism=Escherichia coli, GI1790300, Length=250, Percent_Identity=27.6, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1788713, Length=331, Percent_Identity=25.6797583081571, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR011006
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082
- InterPro:   IPR001789 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 53369; Mature: 53369

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: PS50113 PAC ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELIGFCYAQSRWWRIGLALCIVLAGIAIRVALHDSLGDGLTFVTLYPAVAAAAMLGGAA
CCCEEEEHHCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHCCHH
AGVTATIVATASTQLMVASLGRADNLLGLVVFLCGCIVIVAMAQAMRVFHARLIEAAEIG
HCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ESERQLRRFVEGVPAAIAMFDCNMRYLAASTRWLSAFHPTESVIGRLHYDVFPNIREEWR
HHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHH
EAHRRGLAGEVVRNNEDCHDRADGVKRWVRWEVAPWRDSRGEIGGITIYFEDITENRAMT
HHHHCCCCCHHHCCCCCHHHHHHHHHHHHHEECCCCCCCCCCCCCEEEEEECCCCCHHHH
ERLAQAQQLETVGRLSGAIAHDFNNLLTVIVGNAELLREQLEPHEDLRQLAEHISSAGDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHCCCHHHHHHHHHHHHHCCHH
AAELTQRLLAFGRRQILAPVAVDLNWLVQSVAQIGAASARRGVKIRTVLEPARPLVRADR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHH
LQLESAILNILINAQEAVADDSGRIAIVTGLVVFGDRQDQVRPGRYGVVEITDNGVGMSE
HHHHHHHHHHHHCCHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCHHH
RVRGQAFEPFFTTKEFGTASGLGLSMVYGFVKQSDGHVTIDSQPGVGTTIRLFLPLANPT
HHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEEEECCCC
PSDGDAAPSGA
CCCCCCCCCCC
>Mature Secondary Structure
MELIGFCYAQSRWWRIGLALCIVLAGIAIRVALHDSLGDGLTFVTLYPAVAAAAMLGGAA
CCCEEEEHHCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHCCHH
AGVTATIVATASTQLMVASLGRADNLLGLVVFLCGCIVIVAMAQAMRVFHARLIEAAEIG
HCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ESERQLRRFVEGVPAAIAMFDCNMRYLAASTRWLSAFHPTESVIGRLHYDVFPNIREEWR
HHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHH
EAHRRGLAGEVVRNNEDCHDRADGVKRWVRWEVAPWRDSRGEIGGITIYFEDITENRAMT
HHHHCCCCCHHHCCCCCHHHHHHHHHHHHHEECCCCCCCCCCCCCEEEEEECCCCCHHHH
ERLAQAQQLETVGRLSGAIAHDFNNLLTVIVGNAELLREQLEPHEDLRQLAEHISSAGDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHCCCHHHHHHHHHHHHHCCHH
AAELTQRLLAFGRRQILAPVAVDLNWLVQSVAQIGAASARRGVKIRTVLEPARPLVRADR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHH
LQLESAILNILINAQEAVADDSGRIAIVTGLVVFGDRQDQVRPGRYGVVEITDNGVGMSE
HHHHHHHHHHHHCCHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCHHH
RVRGQAFEPFFTTKEFGTASGLGLSMVYGFVKQSDGHVTIDSQPGVGTTIRLFLPLANPT
HHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEEEECCCC
PSDGDAAPSGA
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA