| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is pyk [H]
Identifier: 86748548
GI number: 86748548
Start: 1610469
End: 1611902
Strand: Reverse
Name: pyk [H]
Synonym: RPB_1423
Alternate gene names: 86748548
Gene position: 1611902-1610469 (Counterclockwise)
Preceding gene: 86748549
Following gene: 86748542
Centisome position: 30.23
GC content: 67.29
Gene sequence:
>1434_bases ATGAGACGTCTGCGCCGGATCAAGATCTTCGCGACACTCGGCCCCGTGTCTTCAGACAGCGCGATGATCCGCAAGCTGTT CGAGGCGGGCGCCGATGTGTTTCGGATCAACATGAGCCACACCTCGCACGACAAGATGCGCGAGCTGATCAAGACCATCC GCAATGTCGAATCGAGCTACGGCCGGCCGATCGGCATTCTGGTCGATCTGCAGGGACCGAAGCTGCGGGTCGGCATGTTC GGCAATGGGCCGATCCAGCTCAACAACGGCGCCACCTTCGTGCTGGATTCCAGCAAGGAGCCCGGCGACGCCGATCGCGT CCACCTGCCGCATCCGGAAATTCTCTCGGCGCTGAAGGTCGGCGACGCGATGCTGCTCGACGACGGCAAGGTCCGGCTGA TCTGCGAAGAAACCTCACCGGATCGCGCCGTCACCCGCGTGGTGATCGGCGGCAAGATGAGCGACCGCAAGGGCGTCAGC CTGCCCGACACCGATCTGCCGATGTCGGCGATGACCAACAAGGACCGCGCCGACCTCGAGGCGGCCTGCGAGGCCGGCAT CGACTGGGTGGCGCTGTCCTTCGTGCAGCGCGCCGAGGATGTCGCCGAAGCCAAGCGGATGATCCGCGGGCGCGCGGCGG TGATGGCGAAGATCGAGAAGCCGCAGGCGATCGACCGGCTCGACGAGATCCTCGGCGTCTCCGACGCGCTGATGGTGGCG CGCGGCGACCTCGGCGTCGAGATGCCGCTGGAGCGCGTGCCAAGTCTGCAAAAGCAGATGACGCGGATGGCGCGCCGCGC CGGCAAGCCGGTGGTGATCGCGACCCAGATGCTGGAATCGATGATCTCCAGCCCGGTGCCGACCCGCGCCGAAGTCTCCG ACGTCGCCACCGCGGTCTATGAGGGCGCCGACGCGATCATGTTGTCGGCGGAATCCGCCGCTGGCAAATATCCGGTCGAA GCCGTCTCGACGATGAACCGGATCGGCGAGGAGGTCGAACGCGATACGATCTACCGCACGGTGGTGACGGCGCAGCGGCC TGAGCCCGAAGCAACCGCCGGCGACGCGATCGCCGGCGCGGCGCGGCAGGTCGCCGAAACGCTCGACCTGTCGGCGATCA TCTGCTGGACCAGTTCGGGCTCGACCGCGCTGCGCGTCGCGCGCGAGCGGCCGAAAGTGCCGGTGGTGGCGATCACGCCG AACGTCAACACCGGGCGCAAGCTGTCGGCGGTGTGGGGCGTGCATTGCGTCGTGGCGGAAGATGCCAAGGATCAGGACGA CATGGTCGACCGCGCCGGCCGCATCGCGTTCCGCGACGGCTTCGCCAAATCCGGCCAGCGCGTCATCATCGTCGCCGGCG TCCCGCTCGGCACCCCCGGCGCCACCAACATGGTGCGGATCGCCTATGTGGGGCCGACCGATACGGATGTGTGA
Upstream 100 bases:
>100_bases GCCCGCCGCCGGGCGCGGGCATCCCCGGCATGTCGCCGACGCCGGGCCGCACCGCGCCGGCCACGCCCACGGCACCACCC GGTGACGCCGGGACCAAGCC
Downstream 100 bases:
>100_bases GGGCCGCAGCCCGATTCAGGCTGCTTCCTCGATCCCGACCACCAGGCGCTTGCCCAGCGCACGTAGCGCCTGGACCATCG CGGGTAGCTTGGTCGGGTGC
Product: pyruvate kinase
Products: NA
Alternate protein names: PK [H]
Number of amino acids: Translated: 477; Mature: 477
Protein sequence:
>477_residues MRRLRRIKIFATLGPVSSDSAMIRKLFEAGADVFRINMSHTSHDKMRELIKTIRNVESSYGRPIGILVDLQGPKLRVGMF GNGPIQLNNGATFVLDSSKEPGDADRVHLPHPEILSALKVGDAMLLDDGKVRLICEETSPDRAVTRVVIGGKMSDRKGVS LPDTDLPMSAMTNKDRADLEAACEAGIDWVALSFVQRAEDVAEAKRMIRGRAAVMAKIEKPQAIDRLDEILGVSDALMVA RGDLGVEMPLERVPSLQKQMTRMARRAGKPVVIATQMLESMISSPVPTRAEVSDVATAVYEGADAIMLSAESAAGKYPVE AVSTMNRIGEEVERDTIYRTVVTAQRPEPEATAGDAIAGAARQVAETLDLSAIICWTSSGSTALRVARERPKVPVVAITP NVNTGRKLSAVWGVHCVVAEDAKDQDDMVDRAGRIAFRDGFAKSGQRVIIVAGVPLGTPGATNMVRIAYVGPTDTDV
Sequences:
>Translated_477_residues MRRLRRIKIFATLGPVSSDSAMIRKLFEAGADVFRINMSHTSHDKMRELIKTIRNVESSYGRPIGILVDLQGPKLRVGMF GNGPIQLNNGATFVLDSSKEPGDADRVHLPHPEILSALKVGDAMLLDDGKVRLICEETSPDRAVTRVVIGGKMSDRKGVS LPDTDLPMSAMTNKDRADLEAACEAGIDWVALSFVQRAEDVAEAKRMIRGRAAVMAKIEKPQAIDRLDEILGVSDALMVA RGDLGVEMPLERVPSLQKQMTRMARRAGKPVVIATQMLESMISSPVPTRAEVSDVATAVYEGADAIMLSAESAAGKYPVE AVSTMNRIGEEVERDTIYRTVVTAQRPEPEATAGDAIAGAARQVAETLDLSAIICWTSSGSTALRVARERPKVPVVAITP NVNTGRKLSAVWGVHCVVAEDAKDQDDMVDRAGRIAFRDGFAKSGQRVIIVAGVPLGTPGATNMVRIAYVGPTDTDV >Mature_477_residues MRRLRRIKIFATLGPVSSDSAMIRKLFEAGADVFRINMSHTSHDKMRELIKTIRNVESSYGRPIGILVDLQGPKLRVGMF GNGPIQLNNGATFVLDSSKEPGDADRVHLPHPEILSALKVGDAMLLDDGKVRLICEETSPDRAVTRVVIGGKMSDRKGVS LPDTDLPMSAMTNKDRADLEAACEAGIDWVALSFVQRAEDVAEAKRMIRGRAAVMAKIEKPQAIDRLDEILGVSDALMVA RGDLGVEMPLERVPSLQKQMTRMARRAGKPVVIATQMLESMISSPVPTRAEVSDVATAVYEGADAIMLSAESAAGKYPVE AVSTMNRIGEEVERDTIYRTVVTAQRPEPEATAGDAIAGAARQVAETLDLSAIICWTSSGSTALRVARERPKVPVVAITP NVNTGRKLSAVWGVHCVVAEDAKDQDDMVDRAGRIAFRDGFAKSGQRVIIVAGVPLGTPGATNMVRIAYVGPTDTDV
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family [H]
Homologues:
Organism=Homo sapiens, GI33286422, Length=486, Percent_Identity=37.037037037037, Blast_Score=292, Evalue=6e-79, Organism=Homo sapiens, GI33286420, Length=486, Percent_Identity=37.037037037037, Blast_Score=292, Evalue=6e-79, Organism=Homo sapiens, GI33286418, Length=491, Percent_Identity=37.2708757637475, Blast_Score=291, Evalue=1e-78, Organism=Homo sapiens, GI32967597, Length=493, Percent_Identity=37.525354969574, Blast_Score=283, Evalue=3e-76, Organism=Homo sapiens, GI10835121, Length=493, Percent_Identity=37.525354969574, Blast_Score=283, Evalue=4e-76, Organism=Homo sapiens, GI310128732, Length=287, Percent_Identity=35.191637630662, Blast_Score=175, Evalue=1e-43, Organism=Homo sapiens, GI310128730, Length=287, Percent_Identity=35.191637630662, Blast_Score=175, Evalue=1e-43, Organism=Homo sapiens, GI310128736, Length=237, Percent_Identity=30.379746835443, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI310128734, Length=237, Percent_Identity=30.379746835443, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI310128738, Length=214, Percent_Identity=30.3738317757009, Blast_Score=111, Evalue=2e-24, Organism=Escherichia coli, GI1788160, Length=482, Percent_Identity=38.7966804979253, Blast_Score=293, Evalue=1e-80, Organism=Escherichia coli, GI1787965, Length=463, Percent_Identity=35.85313174946, Blast_Score=289, Evalue=3e-79, Organism=Caenorhabditis elegans, GI17544584, Length=484, Percent_Identity=34.297520661157, Blast_Score=269, Evalue=2e-72, Organism=Caenorhabditis elegans, GI71984406, Length=483, Percent_Identity=36.8530020703934, Blast_Score=269, Evalue=3e-72, Organism=Caenorhabditis elegans, GI71984413, Length=483, Percent_Identity=36.8530020703934, Blast_Score=269, Evalue=3e-72, Organism=Caenorhabditis elegans, GI17506829, Length=483, Percent_Identity=36.8530020703934, Blast_Score=268, Evalue=4e-72, Organism=Caenorhabditis elegans, GI17506831, Length=483, Percent_Identity=36.8530020703934, Blast_Score=268, Evalue=5e-72, Organism=Saccharomyces cerevisiae, GI6319279, Length=485, Percent_Identity=34.020618556701, Blast_Score=252, Evalue=1e-67, Organism=Saccharomyces cerevisiae, GI6324923, Length=491, Percent_Identity=32.7902240325866, Blast_Score=237, Evalue=3e-63, Organism=Drosophila melanogaster, GI24648964, Length=490, Percent_Identity=35.1020408163265, Blast_Score=280, Evalue=2e-75, Organism=Drosophila melanogaster, GI28571814, Length=490, Percent_Identity=35.1020408163265, Blast_Score=279, Evalue=3e-75, Organism=Drosophila melanogaster, GI24581235, Length=485, Percent_Identity=30.7216494845361, Blast_Score=238, Evalue=7e-63, Organism=Drosophila melanogaster, GI24648966, Length=408, Percent_Identity=33.8235294117647, Blast_Score=233, Evalue=2e-61, Organism=Drosophila melanogaster, GI24646914, Length=240, Percent_Identity=36.25, Blast_Score=154, Evalue=1e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 51361; Mature: 51361
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: PS00110 PYRUVATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLRRIKIFATLGPVSSDSAMIRKLFEAGADVFRINMSHTSHDKMRELIKTIRNVESSY CCCCEEEEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHC GRPIGILVDLQGPKLRVGMFGNGPIQLNNGATFVLDSSKEPGDADRVHLPHPEILSALKV CCCEEEEEECCCCEEEEEEECCCCEEECCCEEEEECCCCCCCCCCCEECCCHHHHHHHHC GDAMLLDDGKVRLICEETSPDRAVTRVVIGGKMSDRKGVSLPDTDLPMSAMTNKDRADLE CCEEEECCCCEEEEECCCCCCHHEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCHHHHH AACEAGIDWVALSFVQRAEDVAEAKRMIRGRAAVMAKIEKPQAIDRLDEILGVSDALMVA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHEEE RGDLGVEMPLERVPSLQKQMTRMARRAGKPVVIATQMLESMISSPVPTRAEVSDVATAVY ECCCCCCCCHHHCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHH EGADAIMLSAESAAGKYPVEAVSTMNRIGEEVERDTIYRTVVTAQRPEPEATAGDAIAGA CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH ARQVAETLDLSAIICWTSSGSTALRVARERPKVPVVAITPNVNTGRKLSAVWGVHCVVAE HHHHHHHHCCEEEEEEECCCCHHHHHHHHCCCCCEEEECCCCCCCCEEEHHHCEEEEEEC DAKDQDDMVDRAGRIAFRDGFAKSGQRVIIVAGVPLGTPGATNMVRIAYVGPTDTDV CCCCHHHHHHHCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCC >Mature Secondary Structure MRRLRRIKIFATLGPVSSDSAMIRKLFEAGADVFRINMSHTSHDKMRELIKTIRNVESSY CCCCEEEEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHC GRPIGILVDLQGPKLRVGMFGNGPIQLNNGATFVLDSSKEPGDADRVHLPHPEILSALKV CCCEEEEEECCCCEEEEEEECCCCEEECCCEEEEECCCCCCCCCCCEECCCHHHHHHHHC GDAMLLDDGKVRLICEETSPDRAVTRVVIGGKMSDRKGVSLPDTDLPMSAMTNKDRADLE CCEEEECCCCEEEEECCCCCCHHEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCHHHHH AACEAGIDWVALSFVQRAEDVAEAKRMIRGRAAVMAKIEKPQAIDRLDEILGVSDALMVA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHEEE RGDLGVEMPLERVPSLQKQMTRMARRAGKPVVIATQMLESMISSPVPTRAEVSDVATAVY ECCCCCCCCHHHCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHH EGADAIMLSAESAAGKYPVEAVSTMNRIGEEVERDTIYRTVVTAQRPEPEATAGDAIAGA CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH ARQVAETLDLSAIICWTSSGSTALRVARERPKVPVVAITPNVNTGRKLSAVWGVHCVVAE HHHHHHHHCCEEEEEEECCCCHHHHHHHHCCCCCEEEECCCCCCCCEEEHHHCEEEEEEC DAKDQDDMVDRAGRIAFRDGFAKSGQRVIIVAGVPLGTPGATNMVRIAYVGPTDTDV CCCCHHHHHHHCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA