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The map label for this gene is 86748549

Identifier: 86748549

GI number: 86748549

Start: 1611899

End: 1612492

Strand: Reverse

Name: 86748549

Synonym: RPB_1424

Alternate gene names: NA

Gene position: 1612492-1611899 (Counterclockwise)

Preceding gene: 86748552

Following gene: 86748548

Centisome position: 30.24

GC content: 70.54

Gene sequence:

>594_bases
ATGTTCAGCACAGATTCTCCCCCCCGCATCGCACAACCGCGCCCTGCCCCGATCGCCCTGACGGCGGCGCTGGCGGTTTG
CGCCCTAATGCTCGCCAGCGTCCCGGCGGCGGCGGATTTCCGGCTGTGCAACAACACGTCGAGCCGGGTCGGCATCGCGC
TCGGCTACAAGGACGCCGACGGATGGACCACCGAGGGTTGGTGGAACGTCTCGTCCCGGAGCTGCGAGACGCTGCTGCGC
GGCACGCTGGTCGCGCGCTACTACTACATCTACGCGCTCGACTACGACCGCGGCGGCGAGTGGTCCGGTCAGGCCTTCAT
GTGCTCGCGCGACAAGGAGTTCACCATCAAAGGCACCGAAAACTGCCTCGCGCGCGGCTTCGACCGCACCGGGTTCTTCG
AGGTCGACACCGGCGAGCAGCGCGCCTGGACCGTGCAACTGACCGAAAGCAGCGAGCAGAACCCGCAGAGGCTACCCGGC
CTGCCGGGCGGCCCGCCGCCGGGCGCGGGCATCCCCGGCATGTCGCCGACGCCGGGCCGCACCGCGCCGGCCACGCCCAC
GGCACCACCCGGTGACGCCGGGACCAAGCCATGA

Upstream 100 bases:

>100_bases
AGCCGCGTCGATCGCATCTGCCGCCCGCCCGGGCGCCGCGCCCGTTGACAGGCCCGTCATGTCACGCGAAATCATTCTCG
TTTTGTTATAGCTTGGCGGC

Downstream 100 bases:

>100_bases
GACGTCTGCGCCGGATCAAGATCTTCGCGACACTCGGCCCCGTGTCTTCAGACAGCGCGATGATCCGCAAGCTGTTCGAG
GCGGGCGCCGATGTGTTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MFSTDSPPRIAQPRPAPIALTAALAVCALMLASVPAAADFRLCNNTSSRVGIALGYKDADGWTTEGWWNVSSRSCETLLR
GTLVARYYYIYALDYDRGGEWSGQAFMCSRDKEFTIKGTENCLARGFDRTGFFEVDTGEQRAWTVQLTESSEQNPQRLPG
LPGGPPPGAGIPGMSPTPGRTAPATPTAPPGDAGTKP

Sequences:

>Translated_197_residues
MFSTDSPPRIAQPRPAPIALTAALAVCALMLASVPAAADFRLCNNTSSRVGIALGYKDADGWTTEGWWNVSSRSCETLLR
GTLVARYYYIYALDYDRGGEWSGQAFMCSRDKEFTIKGTENCLARGFDRTGFFEVDTGEQRAWTVQLTESSEQNPQRLPG
LPGGPPPGAGIPGMSPTPGRTAPATPTAPPGDAGTKP
>Mature_197_residues
MFSTDSPPRIAQPRPAPIALTAALAVCALMLASVPAAADFRLCNNTSSRVGIALGYKDADGWTTEGWWNVSSRSCETLLR
GTLVARYYYIYALDYDRGGEWSGQAFMCSRDKEFTIKGTENCLARGFDRTGFFEVDTGEQRAWTVQLTESSEQNPQRLPG
LPGGPPPGAGIPGMSPTPGRTAPATPTAPPGDAGTKP

Specific function: Unknown

COG id: COG5480

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21035; Mature: 21035

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSTDSPPRIAQPRPAPIALTAALAVCALMLASVPAAADFRLCNNTSSRVGIALGYKDAD
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEEEECCC
GWTTEGWWNVSSRSCETLLRGTLVARYYYIYALDYDRGGEWSGQAFMCSRDKEFTIKGTE
CCCCCCEECCCHHHHHHHHHHHHHEEEEEEEEEECCCCCCCCCCEEEECCCCEEEEECCH
NCLARGFDRTGFFEVDTGEQRAWTVQLTESSEQNPQRLPGLPGGPPPGAGIPGMSPTPGR
HHHHCCCCCCCCEEECCCCCEEEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCC
TAPATPTAPPGDAGTKP
CCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFSTDSPPRIAQPRPAPIALTAALAVCALMLASVPAAADFRLCNNTSSRVGIALGYKDAD
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEEEECCC
GWTTEGWWNVSSRSCETLLRGTLVARYYYIYALDYDRGGEWSGQAFMCSRDKEFTIKGTE
CCCCCCEECCCHHHHHHHHHHHHHEEEEEEEEEECCCCCCCCCCEEEECCCCEEEEECCH
NCLARGFDRTGFFEVDTGEQRAWTVQLTESSEQNPQRLPGLPGGPPPGAGIPGMSPTPGR
HHHHCCCCCCCCEEECCCCCEEEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCC
TAPATPTAPPGDAGTKP
CCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA