| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is cysP [H]
Identifier: 86748523
GI number: 86748523
Start: 1589039
End: 1590049
Strand: Reverse
Name: cysP [H]
Synonym: RPB_1398
Alternate gene names: 86748523
Gene position: 1590049-1589039 (Counterclockwise)
Preceding gene: 86748529
Following gene: 86748522
Centisome position: 29.82
GC content: 63.4
Gene sequence:
>1011_bases GTGAACCGCTTTGCTTTCGCCCTCGCCGCCGGCCTCGCCGCATTCGCGACCGCCATGCCGGCGCAAGCGCAGACGCCACC CGCACCGCTGCTCAATGTCTCCTACGACATCGCGCGGGAACTCTATGCCGAGATCAACGCTGCATTCATCCCGCACTGGA AGCAGACGACCGGCCAGGACATCAGCATCAACCAGTCGCATGGCGGCTCGTCGCGGCAGGCGCGCTCGATCCTCGAAGGG CTCGAAGCCGACGTGGTGACCTTCAATCAGGTCACCGACGTCCAGGTGCTGCACGACAAGGGCAAGCTGATCCCGGCCGA TTGGGCGAAGCGGCTGCCCAATAATTCATCGCCCTACTATTCGCTGCCGGCGTTCCTGGTGCGCGCCGGCAATCCGAAGG GCATCAAGGATTGGGACGATCTGGTGAAGCCGGGCGTCAAGGTGATCTTCCCCAACCCGAAGACCTCCGGCAATGCACGC TACACCTATCTCGCGGCCTACGCCTTCGCCAAGCATAAATACGGCAGCGAGGCCGAGGCCGACGCTTTTGTTAAAAAGCT GTTCGCCAACGTGCCGGTGTTCGACACCGGCGGCCGCGCCGCGACCACCACCTTCGTCGAGCGCCAGACCGGCGACGTGC TGATCACCTTCGAGGCCGAGACCAGCGCGATCCGCGACCTCGCCGGCGCCGACAAGTATCAAGTCGTGGTGCCGCCGACC AGTGTGCTGGCCGAATTCCCCGTCAGCGTCGTCGACAAATACGCCGACAAGCACGGCACCCGCGCGCTCGCGACCGCCTA TCTCGAATATCTGTATTCACCCGAGGGCCAGACCATCCTCGCCAAGGCCTATAACCGCGTCCACGACAAGGCCGTGATCG CGCAATTCAAGGACAAGTTCCCCGAGGTCAAGCTGTATCGCGTCGAGGACGAATTCGGCGGCTGGGACAAGCTCAACGCC GAACACCTCGCCTCCGGCGCGAAGCTCGATCAGCTGTTCGGAGGACGATAA
Upstream 100 bases:
>100_bases TCGATGCTGCCTCGCCGAGGCGTCGAAGGCCGAGACCGCGCGCGAAAATCATCGCGCCCGGCTGCTGCTCGAGATGATAG GCCAGCAATAAGGAGTTGTC
Downstream 100 bases:
>100_bases GTCACAGGCACAGCGCAACCTCTCCCCGCGCGCGGGGAGAGGGCGACCGGCGGAGCGCAGCGAAGCCGGTCGGGTGAGGG GGCGTCTCGACGCAGCCGAG
Product: thiosulphate-binding protein
Products: SO42- [Cytoplasm]; phosphate; ADP; S2O32- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MNRFAFALAAGLAAFATAMPAQAQTPPAPLLNVSYDIARELYAEINAAFIPHWKQTTGQDISINQSHGGSSRQARSILEG LEADVVTFNQVTDVQVLHDKGKLIPADWAKRLPNNSSPYYSLPAFLVRAGNPKGIKDWDDLVKPGVKVIFPNPKTSGNAR YTYLAAYAFAKHKYGSEAEADAFVKKLFANVPVFDTGGRAATTTFVERQTGDVLITFEAETSAIRDLAGADKYQVVVPPT SVLAEFPVSVVDKYADKHGTRALATAYLEYLYSPEGQTILAKAYNRVHDKAVIAQFKDKFPEVKLYRVEDEFGGWDKLNA EHLASGAKLDQLFGGR
Sequences:
>Translated_336_residues MNRFAFALAAGLAAFATAMPAQAQTPPAPLLNVSYDIARELYAEINAAFIPHWKQTTGQDISINQSHGGSSRQARSILEG LEADVVTFNQVTDVQVLHDKGKLIPADWAKRLPNNSSPYYSLPAFLVRAGNPKGIKDWDDLVKPGVKVIFPNPKTSGNAR YTYLAAYAFAKHKYGSEAEADAFVKKLFANVPVFDTGGRAATTTFVERQTGDVLITFEAETSAIRDLAGADKYQVVVPPT SVLAEFPVSVVDKYADKHGTRALATAYLEYLYSPEGQTILAKAYNRVHDKAVIAQFKDKFPEVKLYRVEDEFGGWDKLNA EHLASGAKLDQLFGGR >Mature_336_residues MNRFAFALAAGLAAFATAMPAQAQTPPAPLLNVSYDIARELYAEINAAFIPHWKQTTGQDISINQSHGGSSRQARSILEG LEADVVTFNQVTDVQVLHDKGKLIPADWAKRLPNNSSPYYSLPAFLVRAGNPKGIKDWDDLVKPGVKVIFPNPKTSGNAR YTYLAAYAFAKHKYGSEAEADAFVKKLFANVPVFDTGGRAATTTFVERQTGDVLITFEAETSAIRDLAGADKYQVVVPPT SVLAEFPVSVVDKYADKHGTRALATAYLEYLYSPEGQTILAKAYNRVHDKAVIAQFKDKFPEVKLYRVEDEFGGWDKLNA EHLASGAKLDQLFGGR
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. This protein specifically binds thiosulfate and is involved in its transmembrane transport [H]
COG id: COG4150
COG function: function code P; ABC-type sulfate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic sulfate-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1788765, Length=306, Percent_Identity=57.516339869281, Blast_Score=365, Evalue=1e-102, Organism=Escherichia coli, GI1790351, Length=333, Percent_Identity=50.7507507507508, Blast_Score=333, Evalue=9e-93,
Paralogues:
None
Copy number: 440 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 - InterPro: IPR000957 - InterPro: IPR005669 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 36779; Mature: 36779
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: PS00757 PROK_SULFATE_BIND_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRFAFALAAGLAAFATAMPAQAQTPPAPLLNVSYDIARELYAEINAAFIPHWKQTTGQD CCHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCHHHHHHHHHHHHHHCCCCCCCCCCCC ISINQSHGGSSRQARSILEGLEADVVTFNQVTDVQVLHDKGKLIPADWAKRLPNNSSPYY EEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCEEEECCCCCCCCCHHHHHCCCCCCCCE SLPAFLVRAGNPKGIKDWDDLVKPGVKVIFPNPKTSGNARYTYLAAYAFAKHKYGSEAEA ECCHHEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCCEEEHHHHHHHHHHCCCCCHHH DAFVKKLFANVPVFDTGGRAATTTFVERQTGDVLITFEAETSAIRDLAGADKYQVVVPPT HHHHHHHHHCCCEEECCCCEEEHHEEEECCCCEEEEEECCHHHHHHHCCCCCEEEEECCH SVLAEFPVSVVDKYADKHGTRALATAYLEYLYSPEGQTILAKAYNRVHDKAVIAQFKDKF HHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCC PEVKLYRVEDEFGGWDKLNAEHLASGAKLDQLFGGR CCEEEEEEECCCCCCCCCCHHHHHCCCHHHHHCCCC >Mature Secondary Structure MNRFAFALAAGLAAFATAMPAQAQTPPAPLLNVSYDIARELYAEINAAFIPHWKQTTGQD CCHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCHHHHHHHHHHHHHHCCCCCCCCCCCC ISINQSHGGSSRQARSILEGLEADVVTFNQVTDVQVLHDKGKLIPADWAKRLPNNSSPYY EEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCEEEECCCCCCCCCHHHHHCCCCCCCCE SLPAFLVRAGNPKGIKDWDDLVKPGVKVIFPNPKTSGNARYTYLAAYAFAKHKYGSEAEA ECCHHEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCCEEEHHHHHHHHHHCCCCCHHH DAFVKKLFANVPVFDTGGRAATTTFVERQTGDVLITFEAETSAIRDLAGADKYQVVVPPT HHHHHHHHHCCCEEECCCCEEEHHEEEECCCCEEEEEECCHHHHHHHCCCCCEEEEECCH SVLAEFPVSVVDKYADKHGTRALATAYLEYLYSPEGQTILAKAYNRVHDKAVIAQFKDKF HHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCC PEVKLYRVEDEFGGWDKLNAEHLASGAKLDQLFGGR CCEEEEEEECCCCCCCCCCHHHHHCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: SO42- [Periplasm]; H2O; ATP; S2O32- [Periplasm] [C]
Specific reaction: SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2188959; 9205837; 9278503; 9298646 [H]