| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is serC [H]
Identifier: 86748439
GI number: 86748439
Start: 1496493
End: 1497665
Strand: Direct
Name: serC [H]
Synonym: RPB_1314
Alternate gene names: 86748439
Gene position: 1496493-1497665 (Clockwise)
Preceding gene: 86748438
Following gene: 86748440
Centisome position: 28.07
GC content: 68.2
Gene sequence:
>1173_bases ATGACTGCTACGAAGCCCGCATTGCGGCCCACCACGCCCAATTTCTCCTCCGGCCCCTGCGCCAAGCGCCCCGGATGGAC CCCCGAAAATCTCAAGGACGCCCCGCTCGGCCGCTCGCATCGCGCGAAGGTCGGCAAGGCCAAGCTCAAGCTCGCGATCG ATCTGACGCGCGACGTGCTCGAGGTCCCCGCCGACTACAAGATCGGCATCGTCCCGGCCTCCGACACCGGCGCCGTCGAG ATGGCGCTGTGGTCGCTGCTCGGGCCGCGTCCCGTCACCACCATCGCCTGGGAATCGTTCGGCGACGGCTGGGTCTCCGA CGTCACCAAGGAGCTCAAGCTCAAGGACGTCACCAAGCTCAAGGCGGGCTACGGCGAGATTCCCGACCTCTCCAAGGTCG ATTGCAACACCGACGTCGTCTTCACCTGGAACGGCACCACCTCCGGCGTCCGCGTCCCGAACGCCGACTGGATCGCCGCC GACCGTGAAGGCCTGACCATCTGCGACGCCACCTCGGCCGCCTTCGCGCAGCCGCTGGATTGGCCCAAGCTCGACGTCGT CACCTTCTCCTGGCAGAAGGCGCTCGGCGGCGAAGCCGCGCACGGCATGCTGATCCTCTCGCCGCGCGCCGTGGCGCGTC TGGAGAGCTACACGCCCGCGTGGCCGCTGCCGAAGATCTTCCGCCTCACCAAGGGCGGCAAGCTCAACGAAGGCATCTTC GAAGGCGAGACCATCAACACCCCGTCGATGCTGTGCGTCGAGGACTACATCGACGCGCTGAACTGGGCGAAGTCGGTGGG CGGCCTCAAGGGCCTGATCGCCCGCGCCGACGCCAACACCAAGGCGATCACCGACTGGCAGGCGAAGACCCCGTGGGTCG ACTTCCTCGCCGCCGATCCGGCGATCCGCTCCAACACCTCGGTCTGCCTCAAGGTGGTGGATCCGGCGATCACCGCTCTG TCGCCCGAGGCGCAGGCCGACTTCGCCAAGAAGCTGGTCGCGGTGGTGGAGAAGGAAGGCGCGGGTTACGACCTCGGCGC TTACCGCGACGCGCCCCCCGGCCTGCGGATCTGGTGCGGCGCCACGGTGGAAGCCGCCGACGTCGCCACGCTGACGCAGT GGCTCGACTACGCGTTCGAGACCACCAAGGCCGGCCTCGCCAAAGCCGCCTGA
Upstream 100 bases:
>100_bases TCCCGGAGCCGGGACCTCCTTGACTTTGGCCGGCAAACGACTATCCCCAGCGGCGGGAAACCTCTCCCCACCGAGAGGCA GCTATCTGGAAGGATAGATG
Downstream 100 bases:
>100_bases TGCCACTTACCCTCTCCCCTTGTGGGAGAGGGTGCCTTCGCGAAGCGAAGGCGGGTGAGGGGGTGATGACCCTCGTTATG TCGCCACCCCTCACCCGTCG
Product: phosphoserine aminotransferase
Products: NA
Alternate protein names: Phosphohydroxythreonine aminotransferase; PSAT [H]
Number of amino acids: Translated: 390; Mature: 389
Protein sequence:
>390_residues MTATKPALRPTTPNFSSGPCAKRPGWTPENLKDAPLGRSHRAKVGKAKLKLAIDLTRDVLEVPADYKIGIVPASDTGAVE MALWSLLGPRPVTTIAWESFGDGWVSDVTKELKLKDVTKLKAGYGEIPDLSKVDCNTDVVFTWNGTTSGVRVPNADWIAA DREGLTICDATSAAFAQPLDWPKLDVVTFSWQKALGGEAAHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNEGIF EGETINTPSMLCVEDYIDALNWAKSVGGLKGLIARADANTKAITDWQAKTPWVDFLAADPAIRSNTSVCLKVVDPAITAL SPEAQADFAKKLVAVVEKEGAGYDLGAYRDAPPGLRIWCGATVEAADVATLTQWLDYAFETTKAGLAKAA
Sequences:
>Translated_390_residues MTATKPALRPTTPNFSSGPCAKRPGWTPENLKDAPLGRSHRAKVGKAKLKLAIDLTRDVLEVPADYKIGIVPASDTGAVE MALWSLLGPRPVTTIAWESFGDGWVSDVTKELKLKDVTKLKAGYGEIPDLSKVDCNTDVVFTWNGTTSGVRVPNADWIAA DREGLTICDATSAAFAQPLDWPKLDVVTFSWQKALGGEAAHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNEGIF EGETINTPSMLCVEDYIDALNWAKSVGGLKGLIARADANTKAITDWQAKTPWVDFLAADPAIRSNTSVCLKVVDPAITAL SPEAQADFAKKLVAVVEKEGAGYDLGAYRDAPPGLRIWCGATVEAADVATLTQWLDYAFETTKAGLAKAA >Mature_389_residues TATKPALRPTTPNFSSGPCAKRPGWTPENLKDAPLGRSHRAKVGKAKLKLAIDLTRDVLEVPADYKIGIVPASDTGAVEM ALWSLLGPRPVTTIAWESFGDGWVSDVTKELKLKDVTKLKAGYGEIPDLSKVDCNTDVVFTWNGTTSGVRVPNADWIAAD REGLTICDATSAAFAQPLDWPKLDVVTFSWQKALGGEAAHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNEGIFE GETINTPSMLCVEDYIDALNWAKSVGGLKGLIARADANTKAITDWQAKTPWVDFLAADPAIRSNTSVCLKVVDPAITALS PEAQADFAKKLVAVVEKEGAGYDLGAYRDAPPGLRIWCGATVEAADVATLTQWLDYAFETTKAGLAKAA
Specific function: Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine [H]
COG id: COG1932
COG function: function code HE; Phosphoserine aminotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000192 - InterPro: IPR022278 - InterPro: IPR006271 - InterPro: IPR015424 - InterPro: IPR015421 [H]
Pfam domain/function: PF00266 Aminotran_5 [H]
EC number: =2.6.1.52 [H]
Molecular weight: Translated: 41809; Mature: 41678
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATKPALRPTTPNFSSGPCAKRPGWTPENLKDAPLGRSHRAKVGKAKLKLAIDLTRDVL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCEEEEEEEEEHHHHH EVPADYKIGIVPASDTGAVEMALWSLLGPRPVTTIAWESFGDGWVSDVTKELKLKDVTKL HCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH KAGYGEIPDLSKVDCNTDVVFTWNGTTSGVRVPNADWIAADREGLTICDATSAAFAQPLD HCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEECCCHHHHCCCC WPKLDVVTFSWQKALGGEAAHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNEGIF CCCEEEEEEEHHHHCCCCCCCCEEEECCHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCC EGETINTPSMLCVEDYIDALNWAKSVGGLKGLIARADANTKAITDWQAKTPWVDFLAADP CCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCCEEECCCCCCCHHHHEECCC AIRSNTSVCLKVVDPAITALSPEAQADFAKKLVAVVEKEGAGYDLGAYRDAPPGLRIWCG CCCCCCEEEEEECCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEC ATVEAADVATLTQWLDYAFETTKAGLAKAA CCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TATKPALRPTTPNFSSGPCAKRPGWTPENLKDAPLGRSHRAKVGKAKLKLAIDLTRDVL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCEEEEEEEEEHHHHH EVPADYKIGIVPASDTGAVEMALWSLLGPRPVTTIAWESFGDGWVSDVTKELKLKDVTKL HCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH KAGYGEIPDLSKVDCNTDVVFTWNGTTSGVRVPNADWIAADREGLTICDATSAAFAQPLD HCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEECCCHHHHCCCC WPKLDVVTFSWQKALGGEAAHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNEGIF CCCEEEEEEEHHHHCCCCCCCCEEEECCHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCC EGETINTPSMLCVEDYIDALNWAKSVGGLKGLIARADANTKAITDWQAKTPWVDFLAADP CCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCCEEECCCCCCCHHHHEECCC AIRSNTSVCLKVVDPAITALSPEAQADFAKKLVAVVEKEGAGYDLGAYRDAPPGLRIWCG CCCCCCEEEEEECCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEC ATVEAADVATLTQWLDYAFETTKAGLAKAA CCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11932238 [H]