Click here to switch to the map view.

The map label for this gene is 86748416

Identifier: 86748416

GI number: 86748416

Start: 1473383

End: 1474423

Strand: Direct

Name: 86748416

Synonym: RPB_1291

Alternate gene names: NA

Gene position: 1473383-1474423 (Clockwise)

Preceding gene: 86748415

Following gene: 86748417

Centisome position: 27.63

GC content: 63.69

Gene sequence:

>1041_bases
GTGCCGAGCTCGAGCAACACGTCGAATCGACGCAGCATTCTGAAGGGCGCGCTCGCCGTCGCGGCGGCTCCGGCGGTGAT
CGGGCAAGCGCTGGCGCAGGAGAAAGTCACCTGGAAGGTTCAGGCGCATTGGCCGAAAGCGTCGGGCTCGTTCAACGACA
GTCTCGCCGTGCTCGCCAAGCAGCTCGCGGCGCGCACCGACGGCCGCTTCAACCTGGAACTGTTCGGCGCCGGCGAGATC
GCCAAGGATCGTGAGATCTACAACGTCGTTCGGCGCGGTGTCGTACCGATGGGGACGATTTCTCCGGCGTATATTCTCGG
CGAAGCGCAGGCGATGGGGCTGCTCTACGGCGTGCCCGGCACGCTGCGCGAGACCTGGGAGATGATGCATCTGACCAAGA
ATCTCGGCATCGAGAAGATGGTCAACGAGGAACTGCGCCCCAAGGGCGTCGTCATCTTCGCCGAGAAGGCTTACCCGACC
GAAGTGGTGCTCAAACGCAAGATCGGATCGGCCGCCGATCTCGGCTCGCTGAAGATCCGCTCCGCCGGCTCGATGCTGGA
ATATCTCGCCGCCGCCGGCGCATCGCCGCAGCAGATCGCCGGCCCTGAGATCTATCAGGCGATCTCGACCGGCGTAGTGG
ACGGCGCGCATTGGGGCGCTGCGGTCGGCGCGCTGTCGATGAAATTCTGGGAGGTCGCGCCGTTCCACATGAAGCCGGCG
CTCGGCTTCACCAACGACGCCTACATCATCAATACGGCCGCGCTGGACAAGCTGCCGGCCGACCTGCGGATACAATTGCT
GTCGCTGATCGAGGAACGCTATTTTCTCCGCTCGGTGGAATATCTGCATCAGGAGGCCGTCGCGTTGAGTACCGGCAAGA
CCAAGATGAACGTCGAGGTCGTGCGGTTTTCCGACGACGTGCTCGGCAGATTCACCGCGGCCTCGAAGACGATCCTGCAG
AAGGAAACCGCCAAGGGCGCCATCGCGACGAAGGGCGGCGAGGCCCTGACGAAGCTGATGTCCGATCTCGGTTACGGCTG
A

Upstream 100 bases:

>100_bases
TCTGCGACATTATCTCCGCGCGCGCGAGGCTTTGGTCGTTGACGAGCCGGTTTGCGACGTGTTCTGATACCGGCAAAACA
ACAGACTGAGGGAGAAGCGC

Downstream 100 bases:

>100_bases
GCGGCACTGTCGTCGCGCCGATGAGGCCCGCGAACCGAATCGCCGAAACGCCCGCGTCGACGCCGTGGTCCGACCTCCTT
GCGTTCGGTTCGCCGCGGCG

Product: twin-arginine translocation pathway signal

Products: NA

Alternate protein names: Twin-Arginine Translocation Pathway Signal; TRAP Dicarboxylate Transporter Subunit DctP; Trap Dicarboxylate Transporter- Dctp Subunit; Trap Dicarboxylate Family Transporter Dctp Subunit; TRAP Dicarboxylate Family Transporter DctP Subunit; Transporter Periplasmic Component; TRAP Mannitol/C4-Dicarboxylate Transporter; TRAP Transporter DctP Family Protein; TRAP Dicarboxylate Transporter DctP Subunit; Periplasmic TRAP-Type Dicarboxylate Transporter Protein; Trap-T Transport System Periplasmic Component; TRAP Dicarboxylate Transporter-DctP Subunit; TRAP Dicarboxylate Transporter; TRAP Dicarboxylate Transporter- Dctp Subunit; Trap Transporter Dctp Subunit Containing Protein; TRAP-Type Mannitol/Chloroaromatic Compound Transport System

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MPSSSNTSNRRSILKGALAVAAAPAVIGQALAQEKVTWKVQAHWPKASGSFNDSLAVLAKQLAARTDGRFNLELFGAGEI
AKDREIYNVVRRGVVPMGTISPAYILGEAQAMGLLYGVPGTLRETWEMMHLTKNLGIEKMVNEELRPKGVVIFAEKAYPT
EVVLKRKIGSAADLGSLKIRSAGSMLEYLAAAGASPQQIAGPEIYQAISTGVVDGAHWGAAVGALSMKFWEVAPFHMKPA
LGFTNDAYIINTAALDKLPADLRIQLLSLIEERYFLRSVEYLHQEAVALSTGKTKMNVEVVRFSDDVLGRFTAASKTILQ
KETAKGAIATKGGEALTKLMSDLGYG

Sequences:

>Translated_346_residues
MPSSSNTSNRRSILKGALAVAAAPAVIGQALAQEKVTWKVQAHWPKASGSFNDSLAVLAKQLAARTDGRFNLELFGAGEI
AKDREIYNVVRRGVVPMGTISPAYILGEAQAMGLLYGVPGTLRETWEMMHLTKNLGIEKMVNEELRPKGVVIFAEKAYPT
EVVLKRKIGSAADLGSLKIRSAGSMLEYLAAAGASPQQIAGPEIYQAISTGVVDGAHWGAAVGALSMKFWEVAPFHMKPA
LGFTNDAYIINTAALDKLPADLRIQLLSLIEERYFLRSVEYLHQEAVALSTGKTKMNVEVVRFSDDVLGRFTAASKTILQ
KETAKGAIATKGGEALTKLMSDLGYG
>Mature_345_residues
PSSSNTSNRRSILKGALAVAAAPAVIGQALAQEKVTWKVQAHWPKASGSFNDSLAVLAKQLAARTDGRFNLELFGAGEIA
KDREIYNVVRRGVVPMGTISPAYILGEAQAMGLLYGVPGTLRETWEMMHLTKNLGIEKMVNEELRPKGVVIFAEKAYPTE
VVLKRKIGSAADLGSLKIRSAGSMLEYLAAAGASPQQIAGPEIYQAISTGVVDGAHWGAAVGALSMKFWEVAPFHMKPAL
GFTNDAYIINTAALDKLPADLRIQLLSLIEERYFLRSVEYLHQEAVALSTGKTKMNVEVVRFSDDVLGRFTAASKTILQK
ETAKGAIATKGGEALTKLMSDLGYG

Specific function: Unknown

COG id: COG4663

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37166; Mature: 37035

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSSSNTSNRRSILKGALAVAAAPAVIGQALAQEKVTWKVQAHWPKASGSFNDSLAVLAK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCHHHHHHHH
QLAARTDGRFNLELFGAGEIAKDREIYNVVRRGVVPMGTISPAYILGEAQAMGLLYGVPG
HHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCHHHEECCHHHHHEEECCCH
TLRETWEMMHLTKNLGIEKMVNEELRPKGVVIFAEKAYPTEVVLKRKIGSAADLGSLKIR
HHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCEEEH
SAGSMLEYLAAAGASPQQIAGPEIYQAISTGVVDGAHWGAAVGALSMKFWEVAPFHMKPA
HHHHHHHHHHHCCCCCHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEECCCCCCCC
LGFTNDAYIINTAALDKLPADLRIQLLSLIEERYFLRSVEYLHQEAVALSTGKTKMNVEV
CCCCCCCEEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEE
VRFSDDVLGRFTAASKTILQKETAKGAIATKGGEALTKLMSDLGYG
EEECHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
PSSSNTSNRRSILKGALAVAAAPAVIGQALAQEKVTWKVQAHWPKASGSFNDSLAVLAK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCHHHHHHHH
QLAARTDGRFNLELFGAGEIAKDREIYNVVRRGVVPMGTISPAYILGEAQAMGLLYGVPG
HHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCHHHEECCHHHHHEEECCCH
TLRETWEMMHLTKNLGIEKMVNEELRPKGVVIFAEKAYPTEVVLKRKIGSAADLGSLKIR
HHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCEEEH
SAGSMLEYLAAAGASPQQIAGPEIYQAISTGVVDGAHWGAAVGALSMKFWEVAPFHMKPA
HHHHHHHHHHHCCCCCHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEECCCCCCCC
LGFTNDAYIINTAALDKLPADLRIQLLSLIEERYFLRSVEYLHQEAVALSTGKTKMNVEV
CCCCCCCEEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEE
VRFSDDVLGRFTAASKTILQKETAKGAIATKGGEALTKLMSDLGYG
EEECHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA