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The map label for this gene is 86748417

Identifier: 86748417

GI number: 86748417

Start: 1474577

End: 1475119

Strand: Direct

Name: 86748417

Synonym: RPB_1292

Alternate gene names: NA

Gene position: 1474577-1475119 (Clockwise)

Preceding gene: 86748416

Following gene: 86748418

Centisome position: 27.66

GC content: 62.8

Gene sequence:

>543_bases
ATGCTGAAACTCGCCGCGGCGATCACCCGCCTCAACGCCTGGGTCGCCAGAATTGCCGCGTGGTTGATCGTCCCGATCTT
TCTGCTGCTGATGGCCGACGTGATCATGCGCTACCTCGTCGGCAGCGCCGCGATCTGGACCGCCGAGTTCGCGCAACTGA
TTTTCGGCGTCTACGCGGTGGTCGCCGGCGGCTATCTGCTGTCGGAGCGGGCGCATGTCAGCGTCGACATCTTCTACGGC
AAATTCTCCCGCGTGCGGAAAGCGAAGGTCGATCTCGCGACCTCTGTTCTGTTCTTCCTGTTCGTCGGCGTGCTGATCTG
GCAGAGCGCCGACATGGCGTGGGAGTCCATGGCAAAGATGGAGTCCAGCTATAGCATCTGGAATCCGTACATCTGGCCGG
TCAAGCTCGCTATCCCCATCGCGGGCGTGCTGCTGCTGCTGCAGGGGCTGGTGCGTGTCGCCTCCGACATCCGCACCGTG
GCCGGATACGAGAACGACCCCGAAACGTTCGGCAAGCAGGCCGGCGACGATCCCTCTCACTGA

Upstream 100 bases:

>100_bases
GCGTCGACGCCGTGGTCCGACCTCCTTGCGTTCGGTTCGCCGCGGCGGGTCGTCTCCGAAGGCCGGCCCGGTCGGCAGCG
TCGAGACAGGAAGTGAAGGA

Downstream 100 bases:

>100_bases
ACGGACGGTCTCGTGTCTGTCGAACTCCTGACCCTGCTGTTCTTCGGTTCGCTGCTGTTCTTCCTGTTCATCGGCACGCC
GCTGGCGTTCACGCTCGGCG

Product: tripartite ATP-independent periplasmic transporter DctQ

Products: NA

Alternate protein names: TRAP Transporter DctQ-Like Membrane Protein; TRAP Dicarboxylate Transporter DctQ Subunit; Tripartite ATP-Independent Periplasmic; Small Integral Membrane Tranport Protein; TRAP Transporter DctQ Family Protein; TRAP Dicarboxylate Transporter Subunit DctQ; Trap Transporter Membrane Protein Dctq Family; TRAP-Type Transporter Small Permease Component; Mannitol Transporter; Transporter DctQ Related Transmembrane Protein

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MLKLAAAITRLNAWVARIAAWLIVPIFLLLMADVIMRYLVGSAAIWTAEFAQLIFGVYAVVAGGYLLSERAHVSVDIFYG
KFSRVRKAKVDLATSVLFFLFVGVLIWQSADMAWESMAKMESSYSIWNPYIWPVKLAIPIAGVLLLLQGLVRVASDIRTV
AGYENDPETFGKQAGDDPSH

Sequences:

>Translated_180_residues
MLKLAAAITRLNAWVARIAAWLIVPIFLLLMADVIMRYLVGSAAIWTAEFAQLIFGVYAVVAGGYLLSERAHVSVDIFYG
KFSRVRKAKVDLATSVLFFLFVGVLIWQSADMAWESMAKMESSYSIWNPYIWPVKLAIPIAGVLLLLQGLVRVASDIRTV
AGYENDPETFGKQAGDDPSH
>Mature_180_residues
MLKLAAAITRLNAWVARIAAWLIVPIFLLLMADVIMRYLVGSAAIWTAEFAQLIFGVYAVVAGGYLLSERAHVSVDIFYG
KFSRVRKAKVDLATSVLFFLFVGVLIWQSADMAWESMAKMESSYSIWNPYIWPVKLAIPIAGVLLLLQGLVRVASDIRTV
AGYENDPETFGKQAGDDPSH

Specific function: Unknown

COG id: COG4665

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19929; Mature: 19929

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKLAAAITRLNAWVARIAAWLIVPIFLLLMADVIMRYLVGSAAIWTAEFAQLIFGVYAV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
VAGGYLLSERAHVSVDIFYGKFSRVRKAKVDLATSVLFFLFVGVLIWQSADMAWESMAKM
HHCCHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
ESSYSIWNPYIWPVKLAIPIAGVLLLLQGLVRVASDIRTVAGYENDPETFGKQAGDDPSH
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCC
>Mature Secondary Structure
MLKLAAAITRLNAWVARIAAWLIVPIFLLLMADVIMRYLVGSAAIWTAEFAQLIFGVYAV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
VAGGYLLSERAHVSVDIFYGKFSRVRKAKVDLATSVLFFLFVGVLIWQSADMAWESMAKM
HHCCHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
ESSYSIWNPYIWPVKLAIPIAGVLLLLQGLVRVASDIRTVAGYENDPETFGKQAGDDPSH
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA