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The map label for this gene is 86748406

Identifier: 86748406

GI number: 86748406

Start: 1465530

End: 1466639

Strand: Direct

Name: 86748406

Synonym: RPB_1281

Alternate gene names: NA

Gene position: 1465530-1466639 (Clockwise)

Preceding gene: 86748405

Following gene: 86748408

Centisome position: 27.49

GC content: 66.58

Gene sequence:

>1110_bases
ATGACCACCTTCACCCCGATCCAGGACGACGCGCTGAAAGCCGTCGCTGCCTGGCTGAAAGCCAAGCCCGGCCGAGGCGG
CACGCCGCTGGTGTTCCGGCTGTTCGGCTATGCCGGCACCGGCAAGACCACGCTGGCGCGCGAGATCGCCGAGGGCGTGT
CGGGCGAGGTGAAGTTCGCCGCCTTCACCGGCAAGGCCGCGCTGGTGATGCGCAACAAGGGCTGCGACGACGCCTCGACG
ATTCATTCGCTGATCTATCGCACCAAGGAGTCGGGCGTCGAGCAGCCGAGCTTCGAATTGTGGGACGACGCCCCGGCGTC
GAAGGCCAAGCTGATCGTGATCGACGAATGCTCGATGGTCGACGAGGAACTCGGCCGCGACCTGATGTCGTTCGATTGCC
CGCTGCTGGTGCTCGGCGATCCGGCGCAGTTGCCGCCGATCCAGGGCGGCGGCTATTTCACCGATTGCGAGCCCGACGTG
ATGCTCACCGAGGTGCATCGCCAGGCGCAGGACGATCCGATCGTGCGGCTGTCGATGGACGTGCGCGAAGGCCGCCGTCT
CGAACTCGGCCGCTACGGCGAGACCGAAGTGGTGACGCGCGACAGCCTCGATCCGCAGCGGGTGATGGACGCCGACCAGG
TGCTGGTCGGCCGCAACAACACAAGGCGCGCCTACAACGCCCGCTTCCGCCAGCGCCTGAACATCGAGGACCCGCTGCCG
GTCGGCGGCGACAAGCTGGTGTGCCTGCGCAACAACCGCAAGAAGGCGCTGTTCAACGGCGGCCTGTGGCGGGTGAAGTC
GCGGGCGCCGACCAAGTCGAAGATCATCACCCTGCGGGTGACGCCGGACGAGGATTTCGGCGGCCGGCTCACCAAGGTGT
CGGTCCGCAACGAGTGCTTCGCCGGGGGCATCGAGGACATCTCGTGGGATCAGCGCAAGCCCTATGACGAGTTCGACTAC
GGCTATGTGCTCACCGTGCACAAGAGCCAGGGCTCGCAATGGGACGACGTCGTGCTGTTCGACGAAAGCTTCGCCTTCCA
GGACAGCCGCGCCCGCTGGCTCTACACCGGCATCACGCGAGCCGCGAAGCGGCTGAGCGTGGTGGTGTGA

Upstream 100 bases:

>100_bases
GCCAACGGCGTCGCCGGCTTGCGCTGAGGCCACGAAGCGCTAGCTTGCCGGCATCGAGTCGCCGCGGGCCATGCCTGCGC
GCCTGCTGCCATGAGACCGC

Downstream 100 bases:

>100_bases
TGTGGTGACGAGGGCCCTGAGCCAGCGTGCCACCCTGCGCTTCAGGCCGCCGGCCGCGCCACGAAGGTCATTCGCCACGG
ATTGTGGCCGATATTGGTGT

Product: deoxyribonuclease

Products: NA

Alternate protein names: Deoxyribonuclease; Helicase RecD/TraA Family; Exonuclease V Subunit Alpha; RecD-Like Exodeoxyribonuclease; Helicase; AAA Family ATPase; Exodeoxyribosylnuclease; Exodeoxyribonuclease; AAA ATPase; RecD/TraA Family Helicase; ATP-Dependent ExoDNAse Alpha Subunit; Helicase RecD/TraA Family Protein

Number of amino acids: Translated: 369; Mature: 368

Protein sequence:

>369_residues
MTTFTPIQDDALKAVAAWLKAKPGRGGTPLVFRLFGYAGTGKTTLAREIAEGVSGEVKFAAFTGKAALVMRNKGCDDAST
IHSLIYRTKESGVEQPSFELWDDAPASKAKLIVIDECSMVDEELGRDLMSFDCPLLVLGDPAQLPPIQGGGYFTDCEPDV
MLTEVHRQAQDDPIVRLSMDVREGRRLELGRYGETEVVTRDSLDPQRVMDADQVLVGRNNTRRAYNARFRQRLNIEDPLP
VGGDKLVCLRNNRKKALFNGGLWRVKSRAPTKSKIITLRVTPDEDFGGRLTKVSVRNECFAGGIEDISWDQRKPYDEFDY
GYVLTVHKSQGSQWDDVVLFDESFAFQDSRARWLYTGITRAAKRLSVVV

Sequences:

>Translated_369_residues
MTTFTPIQDDALKAVAAWLKAKPGRGGTPLVFRLFGYAGTGKTTLAREIAEGVSGEVKFAAFTGKAALVMRNKGCDDAST
IHSLIYRTKESGVEQPSFELWDDAPASKAKLIVIDECSMVDEELGRDLMSFDCPLLVLGDPAQLPPIQGGGYFTDCEPDV
MLTEVHRQAQDDPIVRLSMDVREGRRLELGRYGETEVVTRDSLDPQRVMDADQVLVGRNNTRRAYNARFRQRLNIEDPLP
VGGDKLVCLRNNRKKALFNGGLWRVKSRAPTKSKIITLRVTPDEDFGGRLTKVSVRNECFAGGIEDISWDQRKPYDEFDY
GYVLTVHKSQGSQWDDVVLFDESFAFQDSRARWLYTGITRAAKRLSVVV
>Mature_368_residues
TTFTPIQDDALKAVAAWLKAKPGRGGTPLVFRLFGYAGTGKTTLAREIAEGVSGEVKFAAFTGKAALVMRNKGCDDASTI
HSLIYRTKESGVEQPSFELWDDAPASKAKLIVIDECSMVDEELGRDLMSFDCPLLVLGDPAQLPPIQGGGYFTDCEPDVM
LTEVHRQAQDDPIVRLSMDVREGRRLELGRYGETEVVTRDSLDPQRVMDADQVLVGRNNTRRAYNARFRQRLNIEDPLPV
GGDKLVCLRNNRKKALFNGGLWRVKSRAPTKSKIITLRVTPDEDFGGRLTKVSVRNECFAGGIEDISWDQRKPYDEFDYG
YVLTVHKSQGSQWDDVVLFDESFAFQDSRARWLYTGITRAAKRLSVVV

Specific function: Unknown

COG id: COG0507

COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.11.5

Molecular weight: Translated: 41236; Mature: 41105

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTFTPIQDDALKAVAAWLKAKPGRGGTPLVFRLFGYAGTGKTTLAREIAEGVSGEVKFA
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEE
AFTGKAALVMRNKGCDDASTIHSLIYRTKESGVEQPSFELWDDAPASKAKLIVIDECSMV
EECCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCHHH
DEELGRDLMSFDCPLLVLGDPAQLPPIQGGGYFTDCEPDVMLTEVHRQAQDDPIVRLSMD
HHHHCCHHHHCCCCEEEECCCCCCCCCCCCCEECCCCCCHHHHHHHHHCCCCCEEEEEEE
VREGRRLELGRYGETEVVTRDSLDPQRVMDADQVLVGRNNTRRAYNARFRQRLNIEDPLP
CCCCCEEECCCCCCCEEEECCCCCHHHHHCCHHEEECCCCCCHHHHHHHHHHCCCCCCCC
VGGDKLVCLRNNRKKALFNGGLWRVKSRAPTKSKIITLRVTPDEDFGGRLTKVSVRNECF
CCCCEEEEEECCCCEEEECCCEEEEECCCCCCCEEEEEEECCCCCCCCEEEEEEECCHHH
AGGIEDISWDQRKPYDEFDYGYVLTVHKSQGSQWDDVVLFDESFAFQDSRARWLYTGITR
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEHHHHH
AAKRLSVVV
HHHHHEECC
>Mature Secondary Structure 
TTFTPIQDDALKAVAAWLKAKPGRGGTPLVFRLFGYAGTGKTTLAREIAEGVSGEVKFA
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEE
AFTGKAALVMRNKGCDDASTIHSLIYRTKESGVEQPSFELWDDAPASKAKLIVIDECSMV
EECCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCHHH
DEELGRDLMSFDCPLLVLGDPAQLPPIQGGGYFTDCEPDVMLTEVHRQAQDDPIVRLSMD
HHHHCCHHHHCCCCEEEECCCCCCCCCCCCCEECCCCCCHHHHHHHHHCCCCCEEEEEEE
VREGRRLELGRYGETEVVTRDSLDPQRVMDADQVLVGRNNTRRAYNARFRQRLNIEDPLP
CCCCCEEECCCCCCCEEEECCCCCHHHHHCCHHEEECCCCCCHHHHHHHHHHCCCCCCCC
VGGDKLVCLRNNRKKALFNGGLWRVKSRAPTKSKIITLRVTPDEDFGGRLTKVSVRNECF
CCCCEEEEEECCCCEEEECCCEEEEECCCCCCCEEEEEEECCCCCCCCEEEEEEECCHHH
AGGIEDISWDQRKPYDEFDYGYVLTVHKSQGSQWDDVVLFDESFAFQDSRARWLYTGITR
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEHHHHH
AAKRLSVVV
HHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA