Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is dps [C]

Identifier: 86748408

GI number: 86748408

Start: 1467655

End: 1468182

Strand: Direct

Name: dps [C]

Synonym: RPB_1283

Alternate gene names: 86748408

Gene position: 1467655-1468182 (Clockwise)

Preceding gene: 86748406

Following gene: 86748415

Centisome position: 27.53

GC content: 62.5

Gene sequence:

>528_bases
GTGACCAAAGCCAAATCCGCTTCCATCGCTCCCGACCTCGACACCCCGACCGACCTGCCGCAGCAGTCCGTCGACAAGAT
TTCCGCCGCGCTGAACACGTTGCTGGCCGATGCGTTCGCGCTGTATCTGAAGACCAAGAACTTCCACTGGCACATCAGCG
GCCGGCATTTCCGCGATTATCATCTGATGCTGGACGAGCAGTCCGACCAGATCTTCGCCACCACCGACGCGCTGGCCGAG
CGGGTCCGCAAGGTCGGCGGCGTCACCCTGCGCTCGATCGGCCACATCGCCAAGCTGCAGACCATCCAGGACAACAACGA
GGACTACGTCCCGCCGCGCGAGATGCTGCGCGAGCTGATGAACGACAACAAGAAAATGGCGGCGGCGATGCGCAAGGCGC
ACAAGATCGTCGACGAATGCGACGACGCCGCCAGCGCCGGCCTGCTCGAGAATTTCATCGACGAGACCGAAAAGCGCACC
TGGTTCCTGTTCGAAGCCAGCCGCCAGGAAGGCGCCAACGAAGAGTGA

Upstream 100 bases:

>100_bases
TTCGCGGTTGCGACCTGCTTGGATCGTCCGGATTGAACGATCGCCCCAGCCGACCGATCTTTCGCCTTCGGGCACATCCC
TCTCGACAGGACAACCCGCC

Downstream 100 bases:

>100_bases
GCATCATGAGGTGGTGAGTCCGCCCCGAGGCGCAGAGAACTCCCTCGCCCCGCTGTTGCGGGGAGAGGGATCGGAGGGCA
TCGAAGAAATGTTCAGCCGC

Product: Ferritin and Dps

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MTKAKSASIAPDLDTPTDLPQQSVDKISAALNTLLADAFALYLKTKNFHWHISGRHFRDYHLMLDEQSDQIFATTDALAE
RVRKVGGVTLRSIGHIAKLQTIQDNNEDYVPPREMLRELMNDNKKMAAAMRKAHKIVDECDDAASAGLLENFIDETEKRT
WFLFEASRQEGANEE

Sequences:

>Translated_175_residues
MTKAKSASIAPDLDTPTDLPQQSVDKISAALNTLLADAFALYLKTKNFHWHISGRHFRDYHLMLDEQSDQIFATTDALAE
RVRKVGGVTLRSIGHIAKLQTIQDNNEDYVPPREMLRELMNDNKKMAAAMRKAHKIVDECDDAASAGLLENFIDETEKRT
WFLFEASRQEGANEE
>Mature_174_residues
TKAKSASIAPDLDTPTDLPQQSVDKISAALNTLLADAFALYLKTKNFHWHISGRHFRDYHLMLDEQSDQIFATTDALAER
VRKVGGVTLRSIGHIAKLQTIQDNNEDYVPPREMLRELMNDNKKMAAAMRKAHKIVDECDDAASAGLLENFIDETEKRTW
FLFEASRQEGANEE

Specific function: Unspecifically Binds And Protects DNA From Oxidative Damage Mediated By Hydrogen Peroxide. Iron-Storage Protein. [C]

COG id: COG0783

COG function: function code P; DNA-binding ferritin-like protein (oxidative damage protectant)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dps family [H]

Homologues:

None

Paralogues:

None

Copy number: 6720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002177
- InterPro:   IPR023188
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR008331 [H]

Pfam domain/function: PF00210 Ferritin [H]

EC number: NA

Molecular weight: Translated: 19807; Mature: 19675

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKAKSASIAPDLDTPTDLPQQSVDKISAALNTLLADAFALYLKTKNFHWHISGRHFRDY
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEECEE
HLMLDEQSDQIFATTDALAERVRKVGGVTLRSIGHIAKLQTIQDNNEDYVPPREMLRELM
EEEEECCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
NDNKKMAAAMRKAHKIVDECDDAASAGLLENFIDETEKRTWFLFEASRQEGANEE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCC
>Mature Secondary Structure 
TKAKSASIAPDLDTPTDLPQQSVDKISAALNTLLADAFALYLKTKNFHWHISGRHFRDY
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEECEE
HLMLDEQSDQIFATTDALAERVRKVGGVTLRSIGHIAKLQTIQDNNEDYVPPREMLRELM
EEEEECCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
NDNKKMAAAMRKAHKIVDECDDAASAGLLENFIDETEKRTWFLFEASRQEGANEE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]