| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is iorA [H]
Identifier: 86748357
GI number: 86748357
Start: 1409893
End: 1411716
Strand: Direct
Name: iorA [H]
Synonym: RPB_1232
Alternate gene names: 86748357
Gene position: 1409893-1411716 (Clockwise)
Preceding gene: 86748353
Following gene: 86748358
Centisome position: 26.44
GC content: 67.71
Gene sequence:
>1824_bases ATGCATACACCTTGGCAGGCCGCGGCGGCGCAGAAGAATTCCGCGAGGGAGCTGCGCCCGCTGACCGGCAACGAGGCGAT CGCGCGCGCCGCCTGGGAGGCGGGCGTCCGGGTCGCCGCCGCCTATCCCGGCACGCCGAGCACCGAAATTCTCGAAAGTC TCGCGACCTATCCTGCCGAGGATTTGCACGCCCAGTGGTCGACCAACGAGAAGGTCGCGCTCGACGTCGCGCTCGGCGCG TCGTTCGCGGGCAGCCGCGCGCTGTGCGCGATGAAGCATGTCGGTCTCAACGTCGCCGCCGATGCGTTCATGACGTCGAC CTATATCGGCGTCAACGGCGGGCTGGTGCTGGTCGTCTGCGACGATCCCGGCATTCATTCGTCGCAGAACGAGCAGGACA GCCGGATCTATGGTCAGCTCGCCAGCGTTCCGGTCCTGGAGCCGAGCGATGCGCAGGAGGCCTACGACCTCACCAGATTG GCGTTCGACCTCTCCGAGGAATTCGACACGCCGGTGATCGTCCGCAGCACCACCCGGTTGTCGCATACCCGCAGCACGGT CACGGTCGGCGCGCGCGCCGACATCGCCTCGCGCGGCTTCGTCGAGAGGCCGTCGAAGAACGTGATGATCCCGGCCCACG CCCGCGCCCGCCACCTCGTGGTGCTGGAGCGCGAGGCGAAGCTGAAGGACTATTTCGCGGCCTCGGCGATCACCCGATGG GAGACCGGCGACAGCAGCTTCGGTATCGTCACCGCCGGCACCTGCTATCCCTATGTCCGCGAGGTGCTGCCCAACGCCAC CGTGCTGAAGCTCGGCGCGTCGTGGCCGCTGCCGGAACAATTGCTGCGCGATTTCTGCGCCTCGGTCGACCGCGTCTTCG TGGTCGAGGAGCTGGAGCCGATCATCGAAAAAGAGATCGCGGCACTCGGTATCAAGGTCGAGGGCAAGCGCTTCTTCCCG CGCGCCGGCGAGTTCTCGCCGGAAGTAGTGCGGGGCGGGCTGGTGCAGGCCGGCATCCTGCCGGCGCCGCCGTCGCTGAA TGCCTGGGTGCCGGAGCCGGTGGTGCGGCCGCCGGTGCTGTGCGCCGGCTGTCCGCACACATCGAGCTTCATGGCGGTGC GCGCCTCCGGCGCCCGCGTCGCCGGTGACATCGGCTGCTACACGCTGGCGGTGCTCGATCCCTTGCGCGGCATCGACACC TGCGTGTCGATGGGCTCGTCGATCGGCAACGCCGTCGGCATGGCCAAGGCCGGCGAGACCAAGCCGGTCGTCGCCACCAT CGGCGACTCGACCTTCCTGCATGCCGGCATCCCGGCGCTGATCGACGCGGTCTACAACCAGGCCAATATTGCGGTCATGC TGCTCGACAACCACATCACGGCGATGACCGGCGGCCAGGAGCATCCCGGCACGGGCAAGACGCTGCGCGGCGACCCAGCG CCGCAGATCAACTACGAGGCGCTGATCCGCGCCTGCGGCGTGCAGTGGGTGAAGACGGTCGACAGCTACGATCTCGCCGC CACCCATCAGGCGCTGCGCGAGGCCATCAATTTTCGCGGCGTCGCGGTGCTGATTTCGAACCGGCCCTGCGTGCTCGATC CGATCAAGATCAAGGGGCCGCCGCTCGAAGTCGTGACCAGCCAGTGCACCGCCTGCCAGTCCTGCATGAATCTCGGCTGC CCGGCGCTGACCTGGAGCGACGAATGGTTCGAGGGCCGCCACCGGGTCAAGATCGATCCGGCGCTGTGCATCGGCTGCAC GCTGTGCGCCCAGGTCTGCACCATCGACTGCATCAAGATCGCAACGCCTCCGGTGACGCCATGA
Upstream 100 bases:
>100_bases TTGACTTAGCGCAAATACGAAGGAAGGTAAATTTGGGAAAGAGAGCCTCTTTAAAGCTAATCTAATCGCCGCAGCGGCGT GCGCTTGGGGGGAGCTCTTC
Downstream 100 bases:
>100_bases ACGAGCAGAGCAAAGTCGCCGCCCTCAATGCGGACAGCGAGCCGGTCGCGTTCAACGCGGCGCTGGCCGAGCCGTTCAAC GTGCTGATCGTCGGCGTCGG
Product: indolepyruvate ferredoxin oxidoreductase, alpha subunit
Products: NA
Alternate protein names: IOR; Indolepyruvate ferredoxin oxidoreductase subunit alpha [H]
Number of amino acids: Translated: 607; Mature: 607
Protein sequence:
>607_residues MHTPWQAAAAQKNSARELRPLTGNEAIARAAWEAGVRVAAAYPGTPSTEILESLATYPAEDLHAQWSTNEKVALDVALGA SFAGSRALCAMKHVGLNVAADAFMTSTYIGVNGGLVLVVCDDPGIHSSQNEQDSRIYGQLASVPVLEPSDAQEAYDLTRL AFDLSEEFDTPVIVRSTTRLSHTRSTVTVGARADIASRGFVERPSKNVMIPAHARARHLVVLEREAKLKDYFAASAITRW ETGDSSFGIVTAGTCYPYVREVLPNATVLKLGASWPLPEQLLRDFCASVDRVFVVEELEPIIEKEIAALGIKVEGKRFFP RAGEFSPEVVRGGLVQAGILPAPPSLNAWVPEPVVRPPVLCAGCPHTSSFMAVRASGARVAGDIGCYTLAVLDPLRGIDT CVSMGSSIGNAVGMAKAGETKPVVATIGDSTFLHAGIPALIDAVYNQANIAVMLLDNHITAMTGGQEHPGTGKTLRGDPA PQINYEALIRACGVQWVKTVDSYDLAATHQALREAINFRGVAVLISNRPCVLDPIKIKGPPLEVVTSQCTACQSCMNLGC PALTWSDEWFEGRHRVKIDPALCIGCTLCAQVCTIDCIKIATPPVTP
Sequences:
>Translated_607_residues MHTPWQAAAAQKNSARELRPLTGNEAIARAAWEAGVRVAAAYPGTPSTEILESLATYPAEDLHAQWSTNEKVALDVALGA SFAGSRALCAMKHVGLNVAADAFMTSTYIGVNGGLVLVVCDDPGIHSSQNEQDSRIYGQLASVPVLEPSDAQEAYDLTRL AFDLSEEFDTPVIVRSTTRLSHTRSTVTVGARADIASRGFVERPSKNVMIPAHARARHLVVLEREAKLKDYFAASAITRW ETGDSSFGIVTAGTCYPYVREVLPNATVLKLGASWPLPEQLLRDFCASVDRVFVVEELEPIIEKEIAALGIKVEGKRFFP RAGEFSPEVVRGGLVQAGILPAPPSLNAWVPEPVVRPPVLCAGCPHTSSFMAVRASGARVAGDIGCYTLAVLDPLRGIDT CVSMGSSIGNAVGMAKAGETKPVVATIGDSTFLHAGIPALIDAVYNQANIAVMLLDNHITAMTGGQEHPGTGKTLRGDPA PQINYEALIRACGVQWVKTVDSYDLAATHQALREAINFRGVAVLISNRPCVLDPIKIKGPPLEVVTSQCTACQSCMNLGC PALTWSDEWFEGRHRVKIDPALCIGCTLCAQVCTIDCIKIATPPVTP >Mature_607_residues MHTPWQAAAAQKNSARELRPLTGNEAIARAAWEAGVRVAAAYPGTPSTEILESLATYPAEDLHAQWSTNEKVALDVALGA SFAGSRALCAMKHVGLNVAADAFMTSTYIGVNGGLVLVVCDDPGIHSSQNEQDSRIYGQLASVPVLEPSDAQEAYDLTRL AFDLSEEFDTPVIVRSTTRLSHTRSTVTVGARADIASRGFVERPSKNVMIPAHARARHLVVLEREAKLKDYFAASAITRW ETGDSSFGIVTAGTCYPYVREVLPNATVLKLGASWPLPEQLLRDFCASVDRVFVVEELEPIIEKEIAALGIKVEGKRFFP RAGEFSPEVVRGGLVQAGILPAPPSLNAWVPEPVVRPPVLCAGCPHTSSFMAVRASGARVAGDIGCYTLAVLDPLRGIDT CVSMGSSIGNAVGMAKAGETKPVVATIGDSTFLHAGIPALIDAVYNQANIAVMLLDNHITAMTGGQEHPGTGKTLRGDPA PQINYEALIRACGVQWVKTVDSYDLAATHQALREAINFRGVAVLISNRPCVLDPIKIKGPPLEVVTSQCTACQSCMNLGC PALTWSDEWFEGRHRVKIDPALCIGCTLCAQVCTIDCIKIATPPVTP
Specific function: Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates [H]
COG id: COG4231
COG function: function code C; Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR017721 - InterPro: IPR002880 - InterPro: IPR011766 - InterPro: IPR009014 - InterPro: IPR015941 [H]
Pfam domain/function: PF01855 POR_N; PF02775 TPP_enzyme_C [H]
EC number: =1.2.7.8 [H]
Molecular weight: Translated: 64725; Mature: 64725
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTPWQAAAAQKNSARELRPLTGNEAIARAAWEAGVRVAAAYPGTPSTEILESLATYPAE CCCCHHHHHHCCCCCHHCCCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCH DLHAQWSTNEKVALDVALGASFAGSRALCAMKHVGLNVAADAFMTSTYIGVNGGLVLVVC HHCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHEEEEEECCCEEEEEE DDPGIHSSQNEQDSRIYGQLASVPVLEPSDAQEAYDLTRLAFDLSEEFDTPVIVRSTTRL CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHH SHTRSTVTVGARADIASRGFVERPSKNVMIPAHARARHLVVLEREAKLKDYFAASAITRW CCCCCEEEECCCCCHHHCCCCCCCCCCEEEECCCCCEEEEEEECCHHHHHHHHHHHHEEE ETGDSSFGIVTAGTCYPYVREVLPNATVLKLGASWPLPEQLLRDFCASVDRVFVVEELEP CCCCCCCEEEECCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCHHHEEEHHHHHH IIEKEIAALGIKVEGKRFFPRAGEFSPEVVRGGLVQAGILPAPPSLNAWVPEPVVRPPVL HHHHHHHHHEEEECCCEECCCCCCCCHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCEE CAGCPHTSSFMAVRASGARVAGDIGCYTLAVLDPLRGIDTCVSMGSSIGNAVGMAKAGET EECCCCCCCEEEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC KPVVATIGDSTFLHAGIPALIDAVYNQANIAVMLLDNHITAMTGGQEHPGTGKTLRGDPA CCEEEECCCCCEECCCHHHHHHHHHCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCC PQINYEALIRACGVQWVKTVDSYDLAATHQALREAINFRGVAVLISNRPCVLDPIKIKGP CCCCHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCCEECCEECCCC PLEVVTSQCTACQSCMNLGCPALTWSDEWFEGRHRVKIDPALCIGCTLCAQVCTIDCIKI CHHHHHHHHHHHHHHHHCCCCCEECCHHHHCCCCEEEECHHHHHHHHHHHHHHHHEEEEE ATPPVTP CCCCCCC >Mature Secondary Structure MHTPWQAAAAQKNSARELRPLTGNEAIARAAWEAGVRVAAAYPGTPSTEILESLATYPAE CCCCHHHHHHCCCCCHHCCCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCH DLHAQWSTNEKVALDVALGASFAGSRALCAMKHVGLNVAADAFMTSTYIGVNGGLVLVVC HHCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHEEEEEECCCEEEEEE DDPGIHSSQNEQDSRIYGQLASVPVLEPSDAQEAYDLTRLAFDLSEEFDTPVIVRSTTRL CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHH SHTRSTVTVGARADIASRGFVERPSKNVMIPAHARARHLVVLEREAKLKDYFAASAITRW CCCCCEEEECCCCCHHHCCCCCCCCCCEEEECCCCCEEEEEEECCHHHHHHHHHHHHEEE ETGDSSFGIVTAGTCYPYVREVLPNATVLKLGASWPLPEQLLRDFCASVDRVFVVEELEP CCCCCCCEEEECCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCHHHEEEHHHHHH IIEKEIAALGIKVEGKRFFPRAGEFSPEVVRGGLVQAGILPAPPSLNAWVPEPVVRPPVL HHHHHHHHHEEEECCCEECCCCCCCCHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCEE CAGCPHTSSFMAVRASGARVAGDIGCYTLAVLDPLRGIDTCVSMGSSIGNAVGMAKAGET EECCCCCCCEEEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC KPVVATIGDSTFLHAGIPALIDAVYNQANIAVMLLDNHITAMTGGQEHPGTGKTLRGDPA CCEEEECCCCCEECCCHHHHHHHHHCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCC PQINYEALIRACGVQWVKTVDSYDLAATHQALREAINFRGVAVLISNRPCVLDPIKIKGP CCCCHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCCEECCEECCCC PLEVVTSQCTACQSCMNLGCPALTWSDEWFEGRHRVKIDPALCIGCTLCAQVCTIDCIKI CHHHHHHHHHHHHHHHHCCCCCEECCHHHHCCCCEEEECHHHHHHHHHHHHHHHHEEEEE ATPPVTP CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]