| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86748353
Identifier: 86748353
GI number: 86748353
Start: 1406378
End: 1407397
Strand: Direct
Name: 86748353
Synonym: RPB_1228
Alternate gene names: NA
Gene position: 1406378-1407397 (Clockwise)
Preceding gene: 86748351
Following gene: 86748357
Centisome position: 26.38
GC content: 68.63
Gene sequence:
>1020_bases ATGAAAGCGCGGGACGTGATGACTACCGGGATCGTAACCGTGCCGCCGGATGCCCCGGTGCGCGCGGTCGCGGAGACCCT GCTGAAATACGGCATCAGCGCGGTGCCGGTGGTCGACCACCACGGCGCGCCGCTCGGCATCATCAGCGAGGGCGACCTGA TGCCGCGCAACGAGACCGCCCGGGAGGCGCGCCGCGACTGGTGGCTGCAGATCCTGTCCAACGGCGGCGAGGTGCATCCG GACTATCTGCAGTTCATGAGGTCCGATCACCGCACGGCGGCGCAGATCATGGTATCGCCCGTCGTCACGGTCGATGAAAA TGTGCCGCTCGCCGAGATCGCCGACATTCTGTTCGAGAACAAGATCAAGCGCGTTCCGGTGCTGCGGGAGGGGCGGATCG TCGGCATCGTCAGCCGCGCCGACCTGCTCAAGACCCTCGCCCGCCCCCGCCCCGCCGCCGCGCGCGATCCGGTCCACGAC GACGGCACCGCGCTTCCGATCGCCTCCGACAAGCTCGAAGCGCTGGCCCATCGCCACAACGGCGCGGCGGCGCCGCCGCA CGAACCCGCCGCCGATGAATTCTCGGCGTCGGCGTTTCAGGCGCTGCGCCTCGAACACGAGAAGCATGAAGAGCAACTGC GCCGCGAGGCGAAACGCATCGCCGACGAAAAGCATCACCGCCAGGCCGGGCAGATGCTGGCGTCGCATCTCACCGACGAG GCGTGGGAGCGCATGATGCACAACGCCCGCGCCACCGCCAAGAAGGGCGACGAGGAACATCTGCTGCTGCGCTTTCCGGC GGAGCTGTGCAGCGATCACGGCCGTGCCGTCAACGCGCCCGACCCGGAATGGCCGGCGACGCTGCGCGGCATGGCCGCCG ACATCTATCTGCGCTGGAAGGCGGAGCTGCGGCCGCACGGCTTCACGCTGGCCGCCCGCGTGGTGGATTTCCCCGACGGT ATTCCCGGCGATATCGGCCTGTATCTGAGCTGGGGCAAGCACGACGACGTCGCGCACTGA
Upstream 100 bases:
>100_bases CGGCGGCACCGTCGTGGACGTCTGTCGTCCCGACTTCGTCAATCCGATCGAAACCATAGGTAAGGTACGGCACGAATCGC GGCCGGACAGGGACATGACC
Downstream 100 bases:
>100_bases CCTCGCGCATTGACGTCGCCGCATCGCGCGGCGAGCGCTCAGATCTTCAGATTGCGATACACCGAGACTTCGCGCTCGCG CGCCAGCCGGGCGTCGTCGC
Product: signal-transduction protein
Products: NA
Alternate protein names: CBS Domain Containing Membrane Protein; Signal-Transduction Protein; Signal Transduction Protein With CBS Domains; Signal Transduction Protein; CBS Domain-Containing Membrane Protein; Signal-Transduction Protein With CBS Domains; CBS Domain Protein; Transcriptional Regulator XRE Family; IMP Dehydrogenase; CBS Domain Pair-Containing Protein; Cbs Domain; CBS Domain-Containing Signal Transduction Protein; Cbs Domain Containing Protein; UspA Domain Protein
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MKARDVMTTGIVTVPPDAPVRAVAETLLKYGISAVPVVDHHGAPLGIISEGDLMPRNETAREARRDWWLQILSNGGEVHP DYLQFMRSDHRTAAQIMVSPVVTVDENVPLAEIADILFENKIKRVPVLREGRIVGIVSRADLLKTLARPRPAAARDPVHD DGTALPIASDKLEALAHRHNGAAAPPHEPAADEFSASAFQALRLEHEKHEEQLRREAKRIADEKHHRQAGQMLASHLTDE AWERMMHNARATAKKGDEEHLLLRFPAELCSDHGRAVNAPDPEWPATLRGMAADIYLRWKAELRPHGFTLAARVVDFPDG IPGDIGLYLSWGKHDDVAH
Sequences:
>Translated_339_residues MKARDVMTTGIVTVPPDAPVRAVAETLLKYGISAVPVVDHHGAPLGIISEGDLMPRNETAREARRDWWLQILSNGGEVHP DYLQFMRSDHRTAAQIMVSPVVTVDENVPLAEIADILFENKIKRVPVLREGRIVGIVSRADLLKTLARPRPAAARDPVHD DGTALPIASDKLEALAHRHNGAAAPPHEPAADEFSASAFQALRLEHEKHEEQLRREAKRIADEKHHRQAGQMLASHLTDE AWERMMHNARATAKKGDEEHLLLRFPAELCSDHGRAVNAPDPEWPATLRGMAADIYLRWKAELRPHGFTLAARVVDFPDG IPGDIGLYLSWGKHDDVAH >Mature_339_residues MKARDVMTTGIVTVPPDAPVRAVAETLLKYGISAVPVVDHHGAPLGIISEGDLMPRNETAREARRDWWLQILSNGGEVHP DYLQFMRSDHRTAAQIMVSPVVTVDENVPLAEIADILFENKIKRVPVLREGRIVGIVSRADLLKTLARPRPAAARDPVHD DGTALPIASDKLEALAHRHNGAAAPPHEPAADEFSASAFQALRLEHEKHEEQLRREAKRIADEKHHRQAGQMLASHLTDE AWERMMHNARATAKKGDEEHLLLRFPAELCSDHGRAVNAPDPEWPATLRGMAADIYLRWKAELRPHGFTLAARVVDFPDG IPGDIGLYLSWGKHDDVAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37590; Mature: 37590
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKARDVMTTGIVTVPPDAPVRAVAETLLKYGISAVPVVDHHGAPLGIISEGDLMPRNETA CCCCCEEEECCEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEECCCCCCCCCHHH REARRDWWLQILSNGGEVHPDYLQFMRSDHRTAAQIMVSPVVTVDENVPLAEIADILFEN HHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHCEEEECCCCCHHHHHHHHHHH KIKRVPVLREGRIVGIVSRADLLKTLARPRPAAARDPVHDDGTALPIASDKLEALAHRHN HHHHCCCEECCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC GAAAPPHEPAADEFSASAFQALRLEHEKHEEQLRREAKRIADEKHHRQAGQMLASHLTDE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AWERMMHNARATAKKGDEEHLLLRFPAELCSDHGRAVNAPDPEWPATLRGMAADIYLRWK HHHHHHHHHHHHHCCCCCCEEEEEECHHHHCCCCCCCCCCCCCCCHHHHCCEEEEEEEEE AELRPHGFTLAARVVDFPDGIPGDIGLYLSWGKHDDVAH ECCCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCCC >Mature Secondary Structure MKARDVMTTGIVTVPPDAPVRAVAETLLKYGISAVPVVDHHGAPLGIISEGDLMPRNETA CCCCCEEEECCEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEECCCCCCCCCHHH REARRDWWLQILSNGGEVHPDYLQFMRSDHRTAAQIMVSPVVTVDENVPLAEIADILFEN HHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHCEEEECCCCCHHHHHHHHHHH KIKRVPVLREGRIVGIVSRADLLKTLARPRPAAARDPVHDDGTALPIASDKLEALAHRHN HHHHCCCEECCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC GAAAPPHEPAADEFSASAFQALRLEHEKHEEQLRREAKRIADEKHHRQAGQMLASHLTDE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AWERMMHNARATAKKGDEEHLLLRFPAELCSDHGRAVNAPDPEWPATLRGMAADIYLRWK HHHHHHHHHHHHHCCCCCCEEEEEECHHHHCCCCCCCCCCCCCCCHHHHCCEEEEEEEEE AELRPHGFTLAARVVDFPDGIPGDIGLYLSWGKHDDVAH ECCCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA