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The map label for this gene is omp31 [H]

Identifier: 86748303

GI number: 86748303

Start: 1352116

End: 1352739

Strand: Direct

Name: omp31 [H]

Synonym: RPB_1178

Alternate gene names: 86748303

Gene position: 1352116-1352739 (Clockwise)

Preceding gene: 86748297

Following gene: 86748306

Centisome position: 25.36

GC content: 61.54

Gene sequence:

>624_bases
ATGCGTAAACTTGCGATGGCCGCGGCGACCGTAATCGCCGCAACGGGGTCCACGGCACAGGCGGCGGATATGGGCTATTA
CGGCTCACGGACGCCCTACACCGTGAATCAGCCCCTCAACGCCTTCAGCTGGGCCGGCCCGTATCTGGGCGGCAATCTCG
GCTACGCGTTCGGCAACGTCACCAACAACATCACCAAGCCGTCCGGATTCAGCGGTGGCGTTCAGGGCGGCTACAATTGG
CAGAGCGGCAACATCGTCTTCGGCCTCGAAGGCGATATTCAGTTCTCGACCGCCAACGACACCTTCGCGTCCTACAAATT
CTCGAACCCCTGGTTCGGGACGGCACGCGGCCGCGTCGGCTATGCGATGAACGACATTCTGCTCTACGCAACCGGCGGTC
TCGCTTTCGGTCAGCTGAAGGGCGAATATCTGCTGTCCTCGGAGAGCCACACCTCGGCCGGCTGGACGGTCGGCGCCGGC
GCCGAATTCGCCTTTGCGCCGAAGCTCAGCGCCAAGGTCGAGTATCTTTACGGCAGCCTGTCGACCAACAACTTCTTCAT
CACCGGCGCCCCGAACGGCTACAATTTCGGCCTCATCCGCGCCGGCATCAACTATCATTTCTAA

Upstream 100 bases:

>100_bases
AATCCGTAACCATCCGGATCGCTTTTTCGTCGGCCATTTGTGGCCGAGGGCTGGACGGACGGCGCGCGCAAGCAGCGTCC
CTGCCGTCGAGGAGAGTAAG

Downstream 100 bases:

>100_bases
ACGTCGCGACGAAACCTTCGCGAGCAAGAAACTCGGCGATCAACATTCCCGGCCCTCGTGGCCGGGATTTTTTTTGGACT
GGGTTGTCGGGCGGAGCGCC

Product: outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MRKLAMAAATVIAATGSTAQAADMGYYGSRTPYTVNQPLNAFSWAGPYLGGNLGYAFGNVTNNITKPSGFSGGVQGGYNW
QSGNIVFGLEGDIQFSTANDTFASYKFSNPWFGTARGRVGYAMNDILLYATGGLAFGQLKGEYLLSSESHTSAGWTVGAG
AEFAFAPKLSAKVEYLYGSLSTNNFFITGAPNGYNFGLIRAGINYHF

Sequences:

>Translated_207_residues
MRKLAMAAATVIAATGSTAQAADMGYYGSRTPYTVNQPLNAFSWAGPYLGGNLGYAFGNVTNNITKPSGFSGGVQGGYNW
QSGNIVFGLEGDIQFSTANDTFASYKFSNPWFGTARGRVGYAMNDILLYATGGLAFGQLKGEYLLSSESHTSAGWTVGAG
AEFAFAPKLSAKVEYLYGSLSTNNFFITGAPNGYNFGLIRAGINYHF
>Mature_207_residues
MRKLAMAAATVIAATGSTAQAADMGYYGSRTPYTVNQPLNAFSWAGPYLGGNLGYAFGNVTNNITKPSGFSGGVQGGYNW
QSGNIVFGLEGDIQFSTANDTFASYKFSNPWFGTARGRVGYAMNDILLYATGGLAFGQLKGEYLLSSESHTSAGWTVGAG
AEFAFAPKLSAKVEYLYGSLSTNNFFITGAPNGYNFGLIRAGINYHF

Specific function: Major outer membrane protein associated with peptidoglycans. May function as a porin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the omp25/ropB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017690
- InterPro:   IPR011250
- InterPro:   IPR000498 [H]

Pfam domain/function: PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 21907; Mature: 21907

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLAMAAATVIAATGSTAQAADMGYYGSRTPYTVNQPLNAFSWAGPYLGGNLGYAFGNV
CCHHHHEEEEEEEECCCCCCHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEECCC
TNNITKPSGFSGGVQGGYNWQSGNIVFGLEGDIQFSTANDTFASYKFSNPWFGTARGRVG
CCCCCCCCCCCCCCCCCCEECCCCEEEEECCCEEEEECCCCEEEEEECCCCCCCCCCCCC
YAMNDILLYATGGLAFGQLKGEYLLSSESHTSAGWTVGAGAEFAFAPKLSAKVEYLYGSL
EEECEEEEEEECCEEEEEECCEEEECCCCCCCCCEEECCCCCEEECCCCCCEEEEEEEEE
STNNFFITGAPNGYNFGLIRAGINYHF
CCCCEEEEECCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MRKLAMAAATVIAATGSTAQAADMGYYGSRTPYTVNQPLNAFSWAGPYLGGNLGYAFGNV
CCHHHHEEEEEEEECCCCCCHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEECCC
TNNITKPSGFSGGVQGGYNWQSGNIVFGLEGDIQFSTANDTFASYKFSNPWFGTARGRVG
CCCCCCCCCCCCCCCCCCEECCCCEEEEECCCEEEEECCCCEEEEEECCCCCCCCCCCCC
YAMNDILLYATGGLAFGQLKGEYLLSSESHTSAGWTVGAGAEFAFAPKLSAKVEYLYGSL
EEECEEEEEEECCEEEEEECCEEEECCCCCCCCCEEECCCCCEEECCCCCCEEEEEEEEE
STNNFFITGAPNGYNFGLIRAGINYHF
CCCCEEEEECCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8751924; 11756688 [H]