| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is corA [H]
Identifier: 86748293
GI number: 86748293
Start: 1339235
End: 1340215
Strand: Direct
Name: corA [H]
Synonym: RPB_1168
Alternate gene names: 86748293
Gene position: 1339235-1340215 (Clockwise)
Preceding gene: 86748291
Following gene: 86748296
Centisome position: 25.12
GC content: 65.24
Gene sequence:
>981_bases ATGCTTGCGCTTTTTTCCCCCGTCGATTCCGCGCTGAAGCGGGCCGCCTCGGTCGATTTCGCCGCGCTGCCCGAGGACAC GGTGTGGATCGACCTCGAGCGGCCGACGCCGGACGAGGACCACGCGGTGGAAAAGCTGGCCGGGATCGCGGTGCCGACGC GCGAGGACATGCAGGAGATCGAGATCTCCAGCCGTCTGTATATCGAGAACGGCGCCCGCTATATGACCGCCAGCTTGATG TGCGGCGCCGACACCACCTCGCCGCGGCTGTCGCCGGTCACCTTCATCCTGGCCGGCAAGCGCCTGGTGACGGTGCGCTA TGACGAGCCGCGGCCGTTCGCGGTGATCGAGAACCGGCTCGCCCGCACCCCGTCCTTCGCCGCCACCGGCGAGACCGTGC TGCTCGAACTGCTCGACGCCGTGATCGACCGCTGCGCCGACATTCTGGAGCGCGCCGGCGCCGACGTCGACGACGTCAGC CGCGAGATCTTCGAGCCCGAGGGCTCGGCCCGCACCGGCCACCAGAAGCGCTATTCCGAGATCCTGATCGCGATCGGCCG CAAGGGCGACCTCGTCTCCAAGGTGCGCGAGAGCCTGGTCTCGATCGGCCGCCTGGTCGCCTTCCTCACCGTCGAGGGCG AGGGCCTGAAATGGCCGAAGGACAGCCGCACCCAGCTCAAGACCATGCAGCGCGATGTGATCTCGCTGACCGACCACGCC AGCTACCTGTCGAACAAGATCACCTTCGTGCTCGACGCCATGCTGGGCGTCGTCAATCTCGAGCAGAACAACATCATCAA GCTGTTCTCGGTGATGGCCGTCGTCCTGATGCCGCCGACCCTGATCGCCTCGGTCTACGGCATGAACTTCAAATTCATGC CCGAACTGCAATGGGCCCACGGCTACACCATGGCGCTCGGCATGATGCTGATGGCCGCGGTGCTGCCGTATATGTTCTTC AAGTGGAAGAAGTGGTTGTAG
Upstream 100 bases:
>100_bases CGCCACCTCCGTGGATTGGGCCTTGCCAAATCCGGCCCGGTTGCGCAGTGACGGGCCGAGCCACCCCCGCGGATCGTCGT CCGTCCTGTCCGGAGTTGCC
Downstream 100 bases:
>100_bases GGCGCAGGGTATTCTTTGATGGATCAAGGAGCGCTCAAGCGATCAAATTGTCCTGATCTGCCGTGCCTCGGTTCGTCTCT GCCAGTGCGAGTAGCGGATT
Product: Mg2+ transporter protein, CorA-like
Products: Ni2; [Cytoplasm]; Co; 2 [Cytoplasm]; Mg (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MLALFSPVDSALKRAASVDFAALPEDTVWIDLERPTPDEDHAVEKLAGIAVPTREDMQEIEISSRLYIENGARYMTASLM CGADTTSPRLSPVTFILAGKRLVTVRYDEPRPFAVIENRLARTPSFAATGETVLLELLDAVIDRCADILERAGADVDDVS REIFEPEGSARTGHQKRYSEILIAIGRKGDLVSKVRESLVSIGRLVAFLTVEGEGLKWPKDSRTQLKTMQRDVISLTDHA SYLSNKITFVLDAMLGVVNLEQNNIIKLFSVMAVVLMPPTLIASVYGMNFKFMPELQWAHGYTMALGMMLMAAVLPYMFF KWKKWL
Sequences:
>Translated_326_residues MLALFSPVDSALKRAASVDFAALPEDTVWIDLERPTPDEDHAVEKLAGIAVPTREDMQEIEISSRLYIENGARYMTASLM CGADTTSPRLSPVTFILAGKRLVTVRYDEPRPFAVIENRLARTPSFAATGETVLLELLDAVIDRCADILERAGADVDDVS REIFEPEGSARTGHQKRYSEILIAIGRKGDLVSKVRESLVSIGRLVAFLTVEGEGLKWPKDSRTQLKTMQRDVISLTDHA SYLSNKITFVLDAMLGVVNLEQNNIIKLFSVMAVVLMPPTLIASVYGMNFKFMPELQWAHGYTMALGMMLMAAVLPYMFF KWKKWL >Mature_326_residues MLALFSPVDSALKRAASVDFAALPEDTVWIDLERPTPDEDHAVEKLAGIAVPTREDMQEIEISSRLYIENGARYMTASLM CGADTTSPRLSPVTFILAGKRLVTVRYDEPRPFAVIENRLARTPSFAATGETVLLELLDAVIDRCADILERAGADVDDVS REIFEPEGSARTGHQKRYSEILIAIGRKGDLVSKVRESLVSIGRLVAFLTVEGEGLKWPKDSRTQLKTMQRDVISLTDHA SYLSNKITFVLDAMLGVVNLEQNNIIKLFSVMAVVLMPPTLIASVYGMNFKFMPELQWAHGYTMALGMMLMAAVLPYMFF KWKKWL
Specific function: Mediates influx of magnesium ions [H]
COG id: COG0598
COG function: function code P; Mg2+ and Co2+ transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]
Homologues:
Organism=Escherichia coli, GI2367297, Length=303, Percent_Identity=35.6435643564356, Blast_Score=181, Evalue=8e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004488 - InterPro: IPR002523 [H]
Pfam domain/function: PF01544 CorA [H]
EC number: NA
Molecular weight: Translated: 36365; Mature: 36365
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLALFSPVDSALKRAASVDFAALPEDTVWIDLERPTPDEDHAVEKLAGIAVPTREDMQEI CCEECCHHHHHHHHHHCCCHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHH EISSRLYIENGARYMTASLMCGADTTSPRLSPVTFILAGKRLVTVRYDEPRPFAVIENRL HHHCEEEEECCCEEEEEEEEECCCCCCCCCCCEEEEEECCEEEEEEECCCCCHHHHHHHH ARTPSFAATGETVLLELLDAVIDRCADILERAGADVDDVSREIFEPEGSARTGHQKRYSE HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHH ILIAIGRKGDLVSKVRESLVSIGRLVAFLTVEGEGLKWPKDSRTQLKTMQRDVISLTDHA HHHHCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH SYLSNKITFVLDAMLGVVNLEQNNIIKLFSVMAVVLMPPTLIASVYGMNFKFMPELQWAH HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCEEECCCCCHHC GYTMALGMMLMAAVLPYMFFKWKKWL HHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLALFSPVDSALKRAASVDFAALPEDTVWIDLERPTPDEDHAVEKLAGIAVPTREDMQEI CCEECCHHHHHHHHHHCCCHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHH EISSRLYIENGARYMTASLMCGADTTSPRLSPVTFILAGKRLVTVRYDEPRPFAVIENRL HHHCEEEEECCCEEEEEEEEECCCCCCCCCCCEEEEEECCEEEEEEECCCCCHHHHHHHH ARTPSFAATGETVLLELLDAVIDRCADILERAGADVDDVSREIFEPEGSARTGHQKRYSE HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHH ILIAIGRKGDLVSKVRESLVSIGRLVAFLTVEGEGLKWPKDSRTQLKTMQRDVISLTDHA HHHHCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH SYLSNKITFVLDAMLGVVNLEQNNIIKLFSVMAVVLMPPTLIASVYGMNFKFMPELQWAH HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCEEECCCCCHHC GYTMALGMMLMAAVLPYMFFKWKKWL HHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Ni2; [Periplasm]; Co; 2 [Periplasm]; Mg (II) [Periplasm] [C]
Specific reaction: Ni2+ [Periplasm] = Ni2+ [Cytoplasm] Co+2 [Periplasm] = Co+2 [Cytoplasm] Mg (II) [Periplasm] = Mg (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA