Click here to switch to the map view.

The map label for this gene is 86748291

Identifier: 86748291

GI number: 86748291

Start: 1336848

End: 1337879

Strand: Direct

Name: 86748291

Synonym: RPB_1166

Alternate gene names: NA

Gene position: 1336848-1337879 (Clockwise)

Preceding gene: 86748288

Following gene: 86748293

Centisome position: 25.07

GC content: 73.35

Gene sequence:

>1032_bases
TTGTTCCGCGGCAAAGCGTCGACGCGCGCGGTGCTGATCGCGCTGGTTGTGCTCGGCGCGTCGTCCGCGTGGGCGCAGGG
TGAGATACCGTTGCCGAAGCCGCGCCCGGCCGAGGCGCCGCAACTGCAGGGCGAACGCGCGGCGGACCGGCCCGAGGCCG
ATGCGCCGCAGGCGGAAGCGGCGCCGCCGCCGAAGCCGGAGCCGAAGCCGGAGCCGAAGCCGCCCTCGGCATGCCGGCTG
GCGCTGACCGACGCGATCGCGATCGCGCCGAGCCTTGCCGACATTGCCGGCCCCGGCAGTTGTGGCGGAACCGATCTGGT
GAAGCTCGAAGCGGTGGTGTTGCCGGACGGCAGCCGCGTGCCGCTGACGCCGGCGGCGACGTTGCGCTGCCCGATGGCCA
GCGCGCTCGTCGACTGGGTTCGCAGCGACCTCGCGCCGCTCGCCGCGTCGTTGGCCACGCGTCTCGCCGCGCTCGACAAT
TACGACTCCTACGATTGCCGCGGTCGCAACCGGGTGCGCGGGGCCAAGCTGTCGGAGCACGGCCGCGCCAATGCGATCGA
TCTGCGCGGCTTCAAGCTGGCCGATGGCCGCATGCTGTCGCTGACCGACCGCGCCGCGCCGCGCGCGGTGCGCGAGAGCG
TGCGGCAGTCGGTGTGCGACCGCTTCGCCACCGTGCTCGGCCCGGGCTCGGACGGCTATCACGAGGAGCACGTCCACCTC
GATCTCGCCGAGCGTCGCGGCGGCTACAAGATGTGTCAATGGGAGGTGTGGGAGCCGCTGCCCGTCATCGCGCCGCTGCT
GCCGGCGGAGCGCCCGGCCGAAGCGCCGCCGCGCGAGGTGGCGGCCGGCGAGCCACAGGACCGCGACCCCAACCGCTCGC
CGCAGCAGGCTCAGCCTGAGAACGCGCCGCCGCAGCAGGTTGAGCCGGAGCAGGGCGAGCAAGCCGCCAAGCCAGAGCCG
CCGCCGGCGAGCAGCAAGGCGAAGAGAAAGCCGAAGAAGTCGCGGGGTGAGCGGCAGTCGGAACTGCGGTAG

Upstream 100 bases:

>100_bases
TCAGTCCAAGCATCAAATCGTTCCTCCTGATTGTTATCCTTCATGGATTGGGCGCGACCTTAGCGCGGAGACGGCCGGGC
GAAAACGGTCTTGTCGCAAA

Downstream 100 bases:

>100_bases
CGTCAGCTTTCTGCGCGATGCGAGCCGAGTCCGCTGGCGTGACGTTTTCGATCAGAGCTCGCAGCCGGCACAGCGCAACC
TCTCCCGCTTGCGGGAGAGG

Product: extensin-like protein

Products: NA

Alternate protein names: Extensin-Like Protein; Extensin-Like; Extensin-Like Protein C-Terminus

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MFRGKASTRAVLIALVVLGASSAWAQGEIPLPKPRPAEAPQLQGERAADRPEADAPQAEAAPPPKPEPKPEPKPPSACRL
ALTDAIAIAPSLADIAGPGSCGGTDLVKLEAVVLPDGSRVPLTPAATLRCPMASALVDWVRSDLAPLAASLATRLAALDN
YDSYDCRGRNRVRGAKLSEHGRANAIDLRGFKLADGRMLSLTDRAAPRAVRESVRQSVCDRFATVLGPGSDGYHEEHVHL
DLAERRGGYKMCQWEVWEPLPVIAPLLPAERPAEAPPREVAAGEPQDRDPNRSPQQAQPENAPPQQVEPEQGEQAAKPEP
PPASSKAKRKPKKSRGERQSELR

Sequences:

>Translated_343_residues
MFRGKASTRAVLIALVVLGASSAWAQGEIPLPKPRPAEAPQLQGERAADRPEADAPQAEAAPPPKPEPKPEPKPPSACRL
ALTDAIAIAPSLADIAGPGSCGGTDLVKLEAVVLPDGSRVPLTPAATLRCPMASALVDWVRSDLAPLAASLATRLAALDN
YDSYDCRGRNRVRGAKLSEHGRANAIDLRGFKLADGRMLSLTDRAAPRAVRESVRQSVCDRFATVLGPGSDGYHEEHVHL
DLAERRGGYKMCQWEVWEPLPVIAPLLPAERPAEAPPREVAAGEPQDRDPNRSPQQAQPENAPPQQVEPEQGEQAAKPEP
PPASSKAKRKPKKSRGERQSELR
>Mature_343_residues
MFRGKASTRAVLIALVVLGASSAWAQGEIPLPKPRPAEAPQLQGERAADRPEADAPQAEAAPPPKPEPKPEPKPPSACRL
ALTDAIAIAPSLADIAGPGSCGGTDLVKLEAVVLPDGSRVPLTPAATLRCPMASALVDWVRSDLAPLAASLATRLAALDN
YDSYDCRGRNRVRGAKLSEHGRANAIDLRGFKLADGRMLSLTDRAAPRAVRESVRQSVCDRFATVLGPGSDGYHEEHVHL
DLAERRGGYKMCQWEVWEPLPVIAPLLPAERPAEAPPREVAAGEPQDRDPNRSPQQAQPENAPPQQVEPEQGEQAAKPEP
PPASSKAKRKPKKSRGERQSELR

Specific function: Unknown

COG id: COG3921

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36694; Mature: 36694

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRGKASTRAVLIALVVLGASSAWAQGEIPLPKPRPAEAPQLQGERAADRPEADAPQAEA
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APPPKPEPKPEPKPPSACRLALTDAIAIAPSLADIAGPGSCGGTDLVKLEAVVLPDGSRV
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCEEEEEEEEECCCCCC
PLTPAATLRCPMASALVDWVRSDLAPLAASLATRLAALDNYDSYDCRGRNRVRGAKLSEH
CCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCC
GRANAIDLRGFKLADGRMLSLTDRAAPRAVRESVRQSVCDRFATVLGPGSDGYHEEHVHL
CCCCEEECCCEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
DLAERRGGYKMCQWEVWEPLPVIAPLLPAERPAEAPPREVAAGEPQDRDPNRSPQQAQPE
EHHHCCCCCEEEEEECCCCCHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCC
NAPPQQVEPEQGEQAAKPEPPPASSKAKRKPKKSRGERQSELR
CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHCCHHHHCC
>Mature Secondary Structure
MFRGKASTRAVLIALVVLGASSAWAQGEIPLPKPRPAEAPQLQGERAADRPEADAPQAEA
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APPPKPEPKPEPKPPSACRLALTDAIAIAPSLADIAGPGSCGGTDLVKLEAVVLPDGSRV
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCEEEEEEEEECCCCCC
PLTPAATLRCPMASALVDWVRSDLAPLAASLATRLAALDNYDSYDCRGRNRVRGAKLSEH
CCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCC
GRANAIDLRGFKLADGRMLSLTDRAAPRAVRESVRQSVCDRFATVLGPGSDGYHEEHVHL
CCCCEEECCCEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
DLAERRGGYKMCQWEVWEPLPVIAPLLPAERPAEAPPREVAAGEPQDRDPNRSPQQAQPE
EHHHCCCCCEEEEEECCCCCHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCC
NAPPQQVEPEQGEQAAKPEPPPASSKAKRKPKKSRGERQSELR
CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA