Click here to switch to the map view.

The map label for this gene is 86747962

Identifier: 86747962

GI number: 86747962

Start: 950796

End: 951518

Strand: Direct

Name: 86747962

Synonym: RPB_0836

Alternate gene names: NA

Gene position: 950796-951518 (Clockwise)

Preceding gene: 86747961

Following gene: 86747963

Centisome position: 17.83

GC content: 69.02

Gene sequence:

>723_bases
ATGGATCCGCGTCCTGCCCAGTTTCCGTCCGACCAACGCCAGGCCAGACCGATGCGCCGATTCGGATTCGTGCGCGCGGC
GGTCGCGGCGGTGCTGGGGCTCGGCGTGCTCGGGGTCGGCGGCTTCGCCGCCTTCCTGCTGCAGCTCCGCGTCGAGGAAT
CCAGACCGTCCCGAGCCGCCGACGGCATCGTGGTCCTGACCGGCGGGTCGTCGCGGGTATCGGATGCCGTCGACCTGCTC
GCCTCGGGCTACGGCAAGCGGCTGCTGATCTCCGGCGTGCACAGGACGAGCGGCGCCAGCGAGATCTCGCGCTCGGTGCC
GGACAGCAAGGACTGGCTCGGCTGTTGCGTCGATCTCGACCGCTCCGCCTTCAACACCCGCAGCAACGCCGCCGAAACGA
GGCGCTGGGCGCACGAGCGCGGCTTCCGCTCGCTGATCGTCGTCACCTCGAATTACCACATGCCGCGCGCGATTGCCGAA
ATGTCGCACGCAATGCCGGACATCGAGCTGATCCCGTTCTCGGTGATCGGCGAGAAGTGGCGCGACGAGGCGTGGTGGAG
CAGTGGCGCGACGCTGCGGCTGCTGCTATCCGAATACGCCAAATACGTCGCCGTCGAAGCGCGGGTGCGGCTGGCGCGAC
TGGGCATCGACATCATGCCCGAAGCCGCCGAGCAGTCGCCCGAGTCGGTGGCCCACAAACCGGCGACGGCGCTCGCCAAC
TGA

Upstream 100 bases:

>100_bases
CTTTCGCCGGAAAACCCATTAGAGTCCGGTCGTTTCCGGCCAGCGCGTGCGCCGAAAGAAGCCGCACCGGCGGCCCGCAA
TCGAGGTATATCGGCATCCG

Downstream 100 bases:

>100_bases
CCGGATCGTTTCGATGACGAGCATTTTCGTCCGTTCGTTGATTTTCAACGTGCTGTTCTATCTGCTGCTGGTGTTCTGGA
TTCTGGTCGCGGTGCCGACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MDPRPAQFPSDQRQARPMRRFGFVRAAVAAVLGLGVLGVGGFAAFLLQLRVEESRPSRAADGIVVLTGGSSRVSDAVDLL
ASGYGKRLLISGVHRTSGASEISRSVPDSKDWLGCCVDLDRSAFNTRSNAAETRRWAHERGFRSLIVVTSNYHMPRAIAE
MSHAMPDIELIPFSVIGEKWRDEAWWSSGATLRLLLSEYAKYVAVEARVRLARLGIDIMPEAAEQSPESVAHKPATALAN

Sequences:

>Translated_240_residues
MDPRPAQFPSDQRQARPMRRFGFVRAAVAAVLGLGVLGVGGFAAFLLQLRVEESRPSRAADGIVVLTGGSSRVSDAVDLL
ASGYGKRLLISGVHRTSGASEISRSVPDSKDWLGCCVDLDRSAFNTRSNAAETRRWAHERGFRSLIVVTSNYHMPRAIAE
MSHAMPDIELIPFSVIGEKWRDEAWWSSGATLRLLLSEYAKYVAVEARVRLARLGIDIMPEAAEQSPESVAHKPATALAN
>Mature_240_residues
MDPRPAQFPSDQRQARPMRRFGFVRAAVAAVLGLGVLGVGGFAAFLLQLRVEESRPSRAADGIVVLTGGSSRVSDAVDLL
ASGYGKRLLISGVHRTSGASEISRSVPDSKDWLGCCVDLDRSAFNTRSNAAETRRWAHERGFRSLIVVTSNYHMPRAIAE
MSHAMPDIELIPFSVIGEKWRDEAWWSSGATLRLLLSEYAKYVAVEARVRLARLGIDIMPEAAEQSPESVAHKPATALAN

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26158; Mature: 26158

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPRPAQFPSDQRQARPMRRFGFVRAAVAAVLGLGVLGVGGFAAFLLQLRVEESRPSRAA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DGIVVLTGGSSRVSDAVDLLASGYGKRLLISGVHRTSGASEISRSVPDSKDWLGCCVDLD
CCEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHCCCCCCCHHHHHHHCC
RSAFNTRSNAAETRRWAHERGFRSLIVVTSNYHMPRAIAEMSHAMPDIELIPFSVIGEKW
HHHHCCCCHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCCEECCHHHHHHHH
RDEAWWSSGATLRLLLSEYAKYVAVEARVRLARLGIDIMPEAAEQSPESVAHKPATALAN
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHCCHHHCCC
>Mature Secondary Structure
MDPRPAQFPSDQRQARPMRRFGFVRAAVAAVLGLGVLGVGGFAAFLLQLRVEESRPSRAA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DGIVVLTGGSSRVSDAVDLLASGYGKRLLISGVHRTSGASEISRSVPDSKDWLGCCVDLD
CCEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHCCCCCCCHHHHHHHCC
RSAFNTRSNAAETRRWAHERGFRSLIVVTSNYHMPRAIAEMSHAMPDIELIPFSVIGEKW
HHHHCCCCHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCCEECCHHHHHHHH
RDEAWWSSGATLRLLLSEYAKYVAVEARVRLARLGIDIMPEAAEQSPESVAHKPATALAN
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA