| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is cobO [H]
Identifier: 86747863
GI number: 86747863
Start: 827330
End: 827956
Strand: Reverse
Name: cobO [H]
Synonym: RPB_0737
Alternate gene names: 86747863
Gene position: 827956-827330 (Counterclockwise)
Preceding gene: 86747864
Following gene: 86747862
Centisome position: 15.53
GC content: 65.07
Gene sequence:
>627_bases ATGACCGACGCCGCGCCCGATCGCGACGACAACGCCCGCCACGCCGAGAAGGCGAAGAAGCGCAAGGCCGCTCACGACAA GAAGCTCGAAGGCATGGTCGCCGACAAGGGGCTGCTGATCGTCCACACCGGCACCGGCAAGGGCAAGACCTCGGCCGCAC TCGGCATGGTGTTCCGCCACATCGGCCACGGCATGCCGGTCGGCGTGGTGCATTTCACCAAATCGGAGAAGTGGGACACC GGCGAGGCCAAGCTGCTGGCGCAGTTTCCCGATCTGGTGACGCTGCACATCATGGGCGAAGGCTTCACCTGGGAGACCCA GGACCGCGAACGCGACGTCGCCGCCGCCCGCGCCGGCTGGGAGCGCGCCAAGGAGCTGATCCGTGACGACCGCCATCGCA TGGTGCTGCTGGACGAACTCAACATCGTGCTGCGCTACGACTATCTGCCGATCTCCGAAGTGATCGCCTTCCTGCTCGAC GAGAAGCCCGCCGACAAACACGTCGTCATCACCGGCCGCAACGCCAACCCGGCGCTGATCGAGATCGCCGACCTGGTGAC CGAGATGACGCTGGTGAAACATCCTTTCCGCAGCGGCGTGAAAGCGCAGAAGGGCGTGGAGTTTTGA
Upstream 100 bases:
>100_bases CCGAACGCTTCGCCGAGGCGCTGCGGCGCGGGCTGTGGACGCCGCGCAGCAACCACGCCGCCGACCTGCTCGCCGAGTTG TTACTTCAGAAGGAATCCGC
Downstream 100 bases:
>100_bases GCGCTCACGTGGCACCGCGCGTCTCTTACCCTCCCCCTTGCGGGGAGGGTGGACGGCCGCAGGCCGGCCGGGTGGGGGTA CCCCGAGCACCGTGCTCGCG
Product: cob(I)yrinic acid a,c-diamide adenosyltransferase
Products: NA
Alternate protein names: Cob(I)alamin adenosyltransferase; Corrinoid adenosyltransferase [H]
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MTDAAPDRDDNARHAEKAKKRKAAHDKKLEGMVADKGLLIVHTGTGKGKTSAALGMVFRHIGHGMPVGVVHFTKSEKWDT GEAKLLAQFPDLVTLHIMGEGFTWETQDRERDVAAARAGWERAKELIRDDRHRMVLLDELNIVLRYDYLPISEVIAFLLD EKPADKHVVITGRNANPALIEIADLVTEMTLVKHPFRSGVKAQKGVEF
Sequences:
>Translated_208_residues MTDAAPDRDDNARHAEKAKKRKAAHDKKLEGMVADKGLLIVHTGTGKGKTSAALGMVFRHIGHGMPVGVVHFTKSEKWDT GEAKLLAQFPDLVTLHIMGEGFTWETQDRERDVAAARAGWERAKELIRDDRHRMVLLDELNIVLRYDYLPISEVIAFLLD EKPADKHVVITGRNANPALIEIADLVTEMTLVKHPFRSGVKAQKGVEF >Mature_207_residues TDAAPDRDDNARHAEKAKKRKAAHDKKLEGMVADKGLLIVHTGTGKGKTSAALGMVFRHIGHGMPVGVVHFTKSEKWDTG EAKLLAQFPDLVTLHIMGEGFTWETQDRERDVAAARAGWERAKELIRDDRHRMVLLDELNIVLRYDYLPISEVIAFLLDE KPADKHVVITGRNANPALIEIADLVTEMTLVKHPFRSGVKAQKGVEF
Specific function: Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids [H]
COG id: COG2109
COG function: function code H; ATP:corrinoid adenosyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Cob(I)alamin adenosyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1787525, Length=196, Percent_Identity=44.3877551020408, Blast_Score=169, Evalue=9e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003724 [H]
Pfam domain/function: PF02572 CobA_CobO_BtuR [H]
EC number: =2.5.1.17 [H]
Molecular weight: Translated: 23207; Mature: 23076
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDAAPDRDDNARHAEKAKKRKAAHDKKLEGMVADKGLLIVHTGTGKGKTSAALGMVFRH CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEECCCEEEEECCCCCCCHHHHHHHHHHH IGHGMPVGVVHFTKSEKWDTGEAKLLAQFPDLVTLHIMGEGFTWETQDRERDVAAARAGW HCCCCCEEEEEECCCCCCCCCHHHHHHHCCCEEEEEEECCCCEECCCCHHHHHHHHHHHH ERAKELIRDDRHRMVLLDELNIVLRYDYLPISEVIAFLLDEKPADKHVVITGRNANPALI HHHHHHHHCCCCEEEEEECCCEEEEECCCCHHHHHHHHHCCCCCCCEEEEECCCCCCHHH EIADLVTEMTLVKHPFRSGVKAQKGVEF HHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TDAAPDRDDNARHAEKAKKRKAAHDKKLEGMVADKGLLIVHTGTGKGKTSAALGMVFRH CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEECCCEEEEECCCCCCCHHHHHHHHHHH IGHGMPVGVVHFTKSEKWDTGEAKLLAQFPDLVTLHIMGEGFTWETQDRERDVAAARAGW HCCCCCEEEEEECCCCCCCCCHHHHHHHCCCEEEEEEECCCCEECCCCHHHHHHHHHHHH ERAKELIRDDRHRMVLLDELNIVLRYDYLPISEVIAFLLDEKPADKHVVITGRNANPALI HHHHHHHHCCCCEEEEEECCCEEEEECCCCHHHHHHHHHCCCCCCCEEEEECCCCCCHHH EIADLVTEMTLVKHPFRSGVKAQKGVEF HHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1655697; 1917862 [H]