| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is 86747855
Identifier: 86747855
GI number: 86747855
Start: 819584
End: 820324
Strand: Direct
Name: 86747855
Synonym: RPB_0729
Alternate gene names: NA
Gene position: 819584-820324 (Clockwise)
Preceding gene: 86747843
Following gene: 86747856
Centisome position: 15.37
GC content: 67.21
Gene sequence:
>741_bases ATGGCGGATGATTCCAGATCGAGGGCGCTCTCCGTGACCATGATCAACTCCGACGTCGCTGCGCGGTCGGCCTGGCCGGT CGACGCGACCTCGCGCATGAACCGGATGTATCGCTATCAGCGGCACATCTATGATGCCACGCGCCGGTACTATCTTCTTG GTCGTGACGAACTGATCGCCGCACTGGCCCCCGCCGCCGGCGACAACGTGCTGGAAATCGGCTGCGGCACCGGCCGCAAT CTGATCGAGGCTGCGACCCGGTACCCGAATGCGCGCTTCTATGGATTCGACGTGTCGACCGAGATGCTGACCTCGGCGAT CAGCGGGATCGAGCGCGCCGGGCTGAGCGGTTCGGCGAAGGTCGCCCATGGCGACGCGACCAACTTCACCGCGCAGGCGG TGTTCGGCCAGCCGATCGGGTTCGACCGGGTGATGATCTCCTACAGCCTGTCGATGATCCCGGACTGGACCGCGGTGATC GAGCGGGCGATCGCCAGCCTGAAGCCGGGCGGGCAATTGCACATCGTGGATTTCGGCGACCAGAGCGGTCTGCCGGTCTT CGTTCGCCGCGCGCTGCGCCGTTGGCTGGCGCTGTTCGACGTCACCCCGCGCGACGAGCTCGAAGCGACGCTGATGCAGA TCGCGGCGCGCATCGGCGCCGGGCTGACATTCGACCGGCCCTATCGCGGCTACGCGCAGGCCGCTGTGCTGACGCTGCCG TCGCGGCGCCGCTCGCCATGA
Upstream 100 bases:
>100_bases CAATCGTTCGAGAATAGCCGCGGTGCACTGCAGTTTTGCGACAGTGGCGCGCGGAACGGAGCGGTCGCTGTCATCGTCGT GTCGTCGCAAACGACGATGA
Downstream 100 bases:
>100_bases GCGGATGGCTCGCGCTGCTTGCCGCGGGCCTCATGGAGATCGTCTGGGCGGTGGGCCTGAAGCACTCCGACGGCTTCACC AGATTCTGGCCGGCGCTCGG
Product: putative methyltransferase
Products: NA
Alternate protein names: O-Methyltransferase; Methyltransferase; Methyltransferase Protein; Methyltransferase Domain Family; SAM-Dependent Methyltransferase Protein
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MADDSRSRALSVTMINSDVAARSAWPVDATSRMNRMYRYQRHIYDATRRYYLLGRDELIAALAPAAGDNVLEIGCGTGRN LIEAATRYPNARFYGFDVSTEMLTSAISGIERAGLSGSAKVAHGDATNFTAQAVFGQPIGFDRVMISYSLSMIPDWTAVI ERAIASLKPGGQLHIVDFGDQSGLPVFVRRALRRWLALFDVTPRDELEATLMQIAARIGAGLTFDRPYRGYAQAAVLTLP SRRRSP
Sequences:
>Translated_246_residues MADDSRSRALSVTMINSDVAARSAWPVDATSRMNRMYRYQRHIYDATRRYYLLGRDELIAALAPAAGDNVLEIGCGTGRN LIEAATRYPNARFYGFDVSTEMLTSAISGIERAGLSGSAKVAHGDATNFTAQAVFGQPIGFDRVMISYSLSMIPDWTAVI ERAIASLKPGGQLHIVDFGDQSGLPVFVRRALRRWLALFDVTPRDELEATLMQIAARIGAGLTFDRPYRGYAQAAVLTLP SRRRSP >Mature_245_residues ADDSRSRALSVTMINSDVAARSAWPVDATSRMNRMYRYQRHIYDATRRYYLLGRDELIAALAPAAGDNVLEIGCGTGRNL IEAATRYPNARFYGFDVSTEMLTSAISGIERAGLSGSAKVAHGDATNFTAQAVFGQPIGFDRVMISYSLSMIPDWTAVIE RAIASLKPGGQLHIVDFGDQSGLPVFVRRALRRWLALFDVTPRDELEATLMQIAARIGAGLTFDRPYRGYAQAAVLTLPS RRRSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27040; Mature: 26909
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADDSRSRALSVTMINSDVAARSAWPVDATSRMNRMYRYQRHIYDATRRYYLLGRDELIA CCCCCCCCEEEEEEECCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECHHHHHH ALAPAAGDNVLEIGCGTGRNLIEAATRYPNARFYGFDVSTEMLTSAISGIERAGLSGSAK HHCCCCCCCEEEECCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCE VAHGDATNFTAQAVFGQPIGFDRVMISYSLSMIPDWTAVIERAIASLKPGGQLHIVDFGD EECCCCCCEEEHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCC QSGLPVFVRRALRRWLALFDVTPRDELEATLMQIAARIGAGLTFDRPYRGYAQAAVLTLP CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEEECC SRRRSP CCCCCC >Mature Secondary Structure ADDSRSRALSVTMINSDVAARSAWPVDATSRMNRMYRYQRHIYDATRRYYLLGRDELIA CCCCCCCEEEEEEECCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECHHHHHH ALAPAAGDNVLEIGCGTGRNLIEAATRYPNARFYGFDVSTEMLTSAISGIERAGLSGSAK HHCCCCCCCEEEECCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCE VAHGDATNFTAQAVFGQPIGFDRVMISYSLSMIPDWTAVIERAIASLKPGGQLHIVDFGD EECCCCCCEEEHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCC QSGLPVFVRRALRRWLALFDVTPRDELEATLMQIAARIGAGLTFDRPYRGYAQAAVLTLP CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEEECC SRRRSP CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA