Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86747843

Identifier: 86747843

GI number: 86747843

Start: 804648

End: 805127

Strand: Direct

Name: 86747843

Synonym: RPB_0717

Alternate gene names: NA

Gene position: 804648-805127 (Clockwise)

Preceding gene: 86747839

Following gene: 86747855

Centisome position: 15.09

GC content: 66.04

Gene sequence:

>480_bases
ATGGAATCGAATGCCGTTCACATGATTTTGCCGCCGGACCTGCGGCAGTCGGACACCGCGCTCAAAATCGCGCGCGGCAC
CACGCGCCTGCTGCGCTCGCTGGGCTTCGCCTGCGTCAGCGAATTGCCGCTGCCGTCGGGACGGCGCGCCGATCTGGTGG
CGCTGAACGAGCGCGGCGAGATCTGGATCGTGGAGATCAAATCCTCGCTGGCCGATCTGCGCGCCGACACCAAATGGCCG
GACTATCGGGCGCATTGCGACCGTCTGTTCTTCGCCTTCACGCAGGATCTGCCGTGCGAGATATTTCCCGGCGACACCGG
CCTGATCGTCGCCGACGGCTACGGCGCGCATCTGCAGTGCGAGGCGCCCGAGCACAAATTGGCGGCGCCGACCCGCAAGC
TGATGATGCTGCGCTTCGCGCTCGCCGCCGCACAGCGGCTCAACCGGCTGAGCGATCCGCAGGGATTCGCCGAAAGTTGA

Upstream 100 bases:

>100_bases
GACCCGCGATCGCGGCGCTGCGGCGATGTTTCTGCGGCCGAAATCGGACCGCGAAGCGCCGCTTGGGCACCCGCACCGAA
ATCGGCTAGACTTGGTCGCG

Downstream 100 bases:

>100_bases
CGTAGCGTCGCGGCCGCTACTGATAAGCGGCGACGATGTCCGACACCGCGCGTTCGAGCTGCTTGGCCGTGGCACATTGC
CGGACGGTGTTGCAGAACGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MESNAVHMILPPDLRQSDTALKIARGTTRLLRSLGFACVSELPLPSGRRADLVALNERGEIWIVEIKSSLADLRADTKWP
DYRAHCDRLFFAFTQDLPCEIFPGDTGLIVADGYGAHLQCEAPEHKLAAPTRKLMMLRFALAAAQRLNRLSDPQGFAES

Sequences:

>Translated_159_residues
MESNAVHMILPPDLRQSDTALKIARGTTRLLRSLGFACVSELPLPSGRRADLVALNERGEIWIVEIKSSLADLRADTKWP
DYRAHCDRLFFAFTQDLPCEIFPGDTGLIVADGYGAHLQCEAPEHKLAAPTRKLMMLRFALAAAQRLNRLSDPQGFAES
>Mature_159_residues
MESNAVHMILPPDLRQSDTALKIARGTTRLLRSLGFACVSELPLPSGRRADLVALNERGEIWIVEIKSSLADLRADTKWP
DYRAHCDRLFFAFTQDLPCEIFPGDTGLIVADGYGAHLQCEAPEHKLAAPTRKLMMLRFALAAAQRLNRLSDPQGFAES

Specific function: Unknown

COG id: COG5321

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17647; Mature: 17647

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESNAVHMILPPDLRQSDTALKIARGTTRLLRSLGFACVSELPLPSGRRADLVALNERGE
CCCCCEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCC
IWIVEIKSSLADLRADTKWPDYRAHCDRLFFAFTQDLPCEIFPGDTGLIVADGYGAHLQC
EEEEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCEEEECCCCCEEEE
EAPEHKLAAPTRKLMMLRFALAAAQRLNRLSDPQGFAES
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MESNAVHMILPPDLRQSDTALKIARGTTRLLRSLGFACVSELPLPSGRRADLVALNERGE
CCCCCEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCC
IWIVEIKSSLADLRADTKWPDYRAHCDRLFFAFTQDLPCEIFPGDTGLIVADGYGAHLQC
EEEEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCEEEECCCCCEEEE
EAPEHKLAAPTRKLMMLRFALAAAQRLNRLSDPQGFAES
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA