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The map label for this gene is 86747520

Identifier: 86747520

GI number: 86747520

Start: 439907

End: 440347

Strand: Reverse

Name: 86747520

Synonym: RPB_0394

Alternate gene names: NA

Gene position: 440347-439907 (Counterclockwise)

Preceding gene: 86747525

Following gene: 86747519

Centisome position: 8.26

GC content: 58.5

Gene sequence:

>441_bases
ATGATCGACTGGACCGATATCTATCTTTGGGTGAAGACCCTGCACGTCGTCGCGGTGATCTCGTGGATGGCCGGAATGCT
CTACATGCCGCGGCTGTTCGTCTACCACTGCAGCGCAGAGATCGGCTCGGTTCAGTCCGAGACCTTCAAGATCATGGAAC
GCCGGCTGTACAAGGCGATCATGAATCCGGCCATGATGGTCGCCTGGGCCGCCGGCCTGGTGATCGCCTGGGAGCAGAGC
TATTTCACCTCCGGCTGGTTTCACGCCAAGCTCGGCGCGGTGGTGCTGATGACGGTGATCCACCTGATGCTGGGGCGCTA
CGTGCGCGATTTCGCCGCAGACCGGAACACGCGGACACATAAATTCTATCGGGTGATCAACGAGATACCCACGGTTCTGA
TGATCGCCGCAGTGATCTTTGTGATCGTCAAGCCGTTCTGA

Upstream 100 bases:

>100_bases
GCTTGCGGAAAACTCCGTGATCGCGCATTCGAGTAACGCGCTGTGCGGGCGGTGCGTTCCAGATCGGCTCTGGAATTCCG
CGCGGCCGGTGGGGCGACCG

Downstream 100 bases:

>100_bases
TGGCGAAAAATCGGGCGATGGCGGGACACTGAACGCCTTGCGTGCGGCCTGACGATTTTCTATAGTTCGGCTGTCCCACC
TAAAAGCAGGCGAATGTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MIDWTDIYLWVKTLHVVAVISWMAGMLYMPRLFVYHCSAEIGSVQSETFKIMERRLYKAIMNPAMMVAWAAGLVIAWEQS
YFTSGWFHAKLGAVVLMTVIHLMLGRYVRDFAADRNTRTHKFYRVINEIPTVLMIAAVIFVIVKPF

Sequences:

>Translated_146_residues
MIDWTDIYLWVKTLHVVAVISWMAGMLYMPRLFVYHCSAEIGSVQSETFKIMERRLYKAIMNPAMMVAWAAGLVIAWEQS
YFTSGWFHAKLGAVVLMTVIHLMLGRYVRDFAADRNTRTHKFYRVINEIPTVLMIAAVIFVIVKPF
>Mature_146_residues
MIDWTDIYLWVKTLHVVAVISWMAGMLYMPRLFVYHCSAEIGSVQSETFKIMERRLYKAIMNPAMMVAWAAGLVIAWEQS
YFTSGWFHAKLGAVVLMTVIHLMLGRYVRDFAADRNTRTHKFYRVINEIPTVLMIAAVIFVIVKPF

Specific function: Unknown

COG id: COG1981

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0093 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014351
- InterPro:   IPR005265 [H]

Pfam domain/function: PF03653 UPF0093 [H]

EC number: NA

Molecular weight: Translated: 16940; Mature: 16940

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
7.5 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
7.5 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDWTDIYLWVKTLHVVAVISWMAGMLYMPRLFVYHCSAEIGSVQSETFKIMERRLYKAI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
MNPAMMVAWAAGLVIAWEQSYFTSGWFHAKLGAVVLMTVIHLMLGRYVRDFAADRNTRTH
HCHHHHHHHHHHHHHEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
KFYRVINEIPTVLMIAAVIFVIVKPF
HHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIDWTDIYLWVKTLHVVAVISWMAGMLYMPRLFVYHCSAEIGSVQSETFKIMERRLYKAI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
MNPAMMVAWAAGLVIAWEQSYFTSGWFHAKLGAVVLMTVIHLMLGRYVRDFAADRNTRTH
HCHHHHHHHHHHHHHEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
KFYRVINEIPTVLMIAAVIFVIVKPF
HHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]