| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86747506
Identifier: 86747506
GI number: 86747506
Start: 421639
End: 422085
Strand: Reverse
Name: 86747506
Synonym: RPB_0380
Alternate gene names: NA
Gene position: 422085-421639 (Counterclockwise)
Preceding gene: 86747507
Following gene: 86747495
Centisome position: 7.92
GC content: 70.02
Gene sequence:
>447_bases ATGTCGATCGAAGATGATGTTGCCCTGCTCGAGCGCGTCCCGACGCTGCGGCTGTTGGGCGACACCTCGTTGCGGATGCT GGCGATCGGCTCGGATCAGCGCGACTTCGCGCGCGGCGACGTGCTGTTCAACGCCGGCGATGCGTCGGACGCCGGCTATG TGGTGCAGAGCGGCGCGTTCCAGGTGACGTCGGAGGACGGCGGCCCGCACGAACTGATCGCGCGGCCGGGCGACCTGATC GGCGAACTGGCGCTGGTGCTGCCGATGCCGCGGCCCTCCAGCGCGGTGGCGCTGGAATATTCCTCGGTGATCCGGATCGC CCGCAGCCTGTTTCAGCGCGTGCTCGAAAGCGACCCCGCCGCGGCGAAGCGCCTGCGCGACGAATTCGCCGCCCGCACCA CCACCATCGCCCGCGACATCCTGCGCGCCGGCGCCAAGCTGACGTAG
Upstream 100 bases:
>100_bases TGGTGACCGAGGCCGGTGGCTACAAACTCGTGCCGTGATACCAATAGGGGCCGAATCGTCGCCATAGCCTTGGCGCGTCC CGTTCTCTGACCGGTCCCTG
Downstream 100 bases:
>100_bases CGGCGGGTCAGCGTAGCAGCGGTCAGCGACTCGCGTCGCCCTCACCCCAACCCTCTCCCGCAGGCTGGAGAGGGAGCGCG CTGTGCTTGTTGTCGGTTCG
Product: cyclic nucleotide-binding domain-containing protein
Products: NA
Alternate protein names: Crp/Fnr Family Transcriptional Regulator; Transcription Regulator; Transcriptional Regulator Crp/Fnr Family
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MSIEDDVALLERVPTLRLLGDTSLRMLAIGSDQRDFARGDVLFNAGDASDAGYVVQSGAFQVTSEDGGPHELIARPGDLI GELALVLPMPRPSSAVALEYSSVIRIARSLFQRVLESDPAAAKRLRDEFAARTTTIARDILRAGAKLT
Sequences:
>Translated_148_residues MSIEDDVALLERVPTLRLLGDTSLRMLAIGSDQRDFARGDVLFNAGDASDAGYVVQSGAFQVTSEDGGPHELIARPGDLI GELALVLPMPRPSSAVALEYSSVIRIARSLFQRVLESDPAAAKRLRDEFAARTTTIARDILRAGAKLT >Mature_147_residues SIEDDVALLERVPTLRLLGDTSLRMLAIGSDQRDFARGDVLFNAGDASDAGYVVQSGAFQVTSEDGGPHELIARPGDLIG ELALVLPMPRPSSAVALEYSSVIRIARSLFQRVLESDPAAAKRLRDEFAARTTTIARDILRAGAKLT
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15894; Mature: 15763
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIEDDVALLERVPTLRLLGDTSLRMLAIGSDQRDFARGDVLFNAGDASDAGYVVQSGAF CCCCHHHHHHHHCCCEEEECCCCEEEEEECCCCCHHCCCCEEEECCCCCCCCEEEECCCE QVTSEDGGPHELIARPGDLIGELALVLPMPRPSSAVALEYSSVIRIARSLFQRVLESDPA EEECCCCCCHHHHCCCHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCH AAKRLRDEFAARTTTIARDILRAGAKLT HHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SIEDDVALLERVPTLRLLGDTSLRMLAIGSDQRDFARGDVLFNAGDASDAGYVVQSGAF CCCHHHHHHHHCCCEEEECCCCEEEEEECCCCCHHCCCCEEEECCCCCCCCEEEECCCE QVTSEDGGPHELIARPGDLIGELALVLPMPRPSSAVALEYSSVIRIARSLFQRVLESDPA EEECCCCCCHHHHCCCHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCH AAKRLRDEFAARTTTIARDILRAGAKLT HHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA