| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86747493
Identifier: 86747493
GI number: 86747493
Start: 408479
End: 409243
Strand: Reverse
Name: 86747493
Synonym: RPB_0367
Alternate gene names: NA
Gene position: 409243-408479 (Counterclockwise)
Preceding gene: 86747494
Following gene: 86747492
Centisome position: 7.68
GC content: 68.63
Gene sequence:
>765_bases ATGTCGTCCAGTACCTGGATACGCGACGCGCTCCGGTCTGAGGCGGCCCGGCTCTCCGGCCGGTTCTGGCGGATCGTCGA GGCGCAGCATCAGTCGGCGACGATGAAGCTGACGGATTCGCTCGACGAGCAGGCGCTGCTGGAAGACATCATCGAGGACA CCAAGCCGCCGATCCCGCCGGATTGCGACGGTCTCGACTTCCTGCTGATGACGCCGTTCCGCTACAGCGCCACAAACCCC TGGGGTTCTCGCTTTCGCCGCCCGAACGCCGATACGGGCGTGTTCTACGCCTCCGGGCACCCCGCCACGGCGATCGCCGA AGCGGTGTTTCATCGCCTGCGGTTCTTTGCGGAGTCGCCCGACACGCCGTGGCCGCAAAACCCGGCCGAGCACACCGCCT TCGCCGTCCTGCTCGAATCCGACCGCGCGCTCGATCTGGCTACGCTACCGCCACCCGAGCTGGCGCCGCTGATGCGACGC GACGACTACGCCGCCGCGCAATCGTTCAGCGACGCGGCGCGGGCCGCTGGGGCGGACATCATCAAATACCCGTCGGTGCG TGATCCGCAGGGCGGCGCCAATGTCGCGGTGCTGTCGCCCCGCGCCTTCCATAGTAAGGCGCCGGTCGATCGCCAGACCT GGCGCATCCATTTCGACCGCAACGGCGCCCGCGCCTTCTGCGAAGCGCCGCGCGGCTCGCTCGCGTTCGGCCGCGATGCC TTCGATGCCGATCCCCGGATGCGCGGGTTCGTGTGGGATCGCTGA
Upstream 100 bases:
>100_bases GCCGGCGACGAGACCGCCGCGCGCAAATGGATCAAGGCGGAGAACCTCGCGCTGCGGGGAACGCCAGTCGAACTGATCCA GAAAGTCCAGGGCCTGTTTC
Downstream 100 bases:
>100_bases CCGGCAACTCCGCGTCGGCCGGCTCACGCCTTGCTGCGGCGCAACAGCTGGTGCGCCAGGCCGGGACCTCGCCGCCCGAT CAACTCCCGCTGAGAACGCG
Product: hypothetical protein
Products: NA
Alternate protein names: RES Domain-Containing Protein
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MSSSTWIRDALRSEAARLSGRFWRIVEAQHQSATMKLTDSLDEQALLEDIIEDTKPPIPPDCDGLDFLLMTPFRYSATNP WGSRFRRPNADTGVFYASGHPATAIAEAVFHRLRFFAESPDTPWPQNPAEHTAFAVLLESDRALDLATLPPPELAPLMRR DDYAAAQSFSDAARAAGADIIKYPSVRDPQGGANVAVLSPRAFHSKAPVDRQTWRIHFDRNGARAFCEAPRGSLAFGRDA FDADPRMRGFVWDR
Sequences:
>Translated_254_residues MSSSTWIRDALRSEAARLSGRFWRIVEAQHQSATMKLTDSLDEQALLEDIIEDTKPPIPPDCDGLDFLLMTPFRYSATNP WGSRFRRPNADTGVFYASGHPATAIAEAVFHRLRFFAESPDTPWPQNPAEHTAFAVLLESDRALDLATLPPPELAPLMRR DDYAAAQSFSDAARAAGADIIKYPSVRDPQGGANVAVLSPRAFHSKAPVDRQTWRIHFDRNGARAFCEAPRGSLAFGRDA FDADPRMRGFVWDR >Mature_253_residues SSSTWIRDALRSEAARLSGRFWRIVEAQHQSATMKLTDSLDEQALLEDIIEDTKPPIPPDCDGLDFLLMTPFRYSATNPW GSRFRRPNADTGVFYASGHPATAIAEAVFHRLRFFAESPDTPWPQNPAEHTAFAVLLESDRALDLATLPPPELAPLMRRD DYAAAQSFSDAARAAGADIIKYPSVRDPQGGANVAVLSPRAFHSKAPVDRQTWRIHFDRNGARAFCEAPRGSLAFGRDAF DADPRMRGFVWDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28300; Mature: 28169
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSTWIRDALRSEAARLSGRFWRIVEAQHQSATMKLTDSLDEQALLEDIIEDTKPPIPP CCCCHHHHHHHHHHHHHHCCHHEEEEEHHCCCCEEEHHHCCCHHHHHHHHHHHCCCCCCC DCDGLDFLLMTPFRYSATNPWGSRFRRPNADTGVFYASGHPATAIAEAVFHRLRFFAESP CCCCCCEEEECCCCCCCCCCHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCC DTPWPQNPAEHTAFAVLLESDRALDLATLPPPELAPLMRRDDYAAAQSFSDAARAAGADI CCCCCCCCHHHHEEEEEEECCCCEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCC IKYPSVRDPQGGANVAVLSPRAFHSKAPVDRQTWRIHFDRNGARAFCEAPRGSLAFGRDA EECCCCCCCCCCCCEEEECCHHHHCCCCCCCCEEEEEEECCCCHHHHCCCCCCEEECCCC FDADPRMRGFVWDR CCCCCCCCCCCCCC >Mature Secondary Structure SSSTWIRDALRSEAARLSGRFWRIVEAQHQSATMKLTDSLDEQALLEDIIEDTKPPIPP CCCHHHHHHHHHHHHHHCCHHEEEEEHHCCCCEEEHHHCCCHHHHHHHHHHHCCCCCCC DCDGLDFLLMTPFRYSATNPWGSRFRRPNADTGVFYASGHPATAIAEAVFHRLRFFAESP CCCCCCEEEECCCCCCCCCCHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCC DTPWPQNPAEHTAFAVLLESDRALDLATLPPPELAPLMRRDDYAAAQSFSDAARAAGADI CCCCCCCCHHHHEEEEEEECCCCEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCC IKYPSVRDPQGGANVAVLSPRAFHSKAPVDRQTWRIHFDRNGARAFCEAPRGSLAFGRDA EECCCCCCCCCCCCEEEECCHHHHCCCCCCCCEEEEEEECCCCHHHHCCCCCCEEECCCC FDADPRMRGFVWDR CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA