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The map label for this gene is rlp2 [H]

Identifier: 86747426

GI number: 86747426

Start: 340254

End: 341549

Strand: Reverse

Name: rlp2 [H]

Synonym: RPB_0300

Alternate gene names: 86747426

Gene position: 341549-340254 (Counterclockwise)

Preceding gene: 86747427

Following gene: 86747423

Centisome position: 6.41

GC content: 69.21

Gene sequence:

>1296_bases
ATGACGCCGGACGATATTGCGGGCTTCTACGCGACGCGCGCGGAGCTGAACCCCGACGACTACATCGAGCTCGATTTCGA
TTTCGAATGCGCCGGCGATCCGCGCGAGGCGGCGGCGCATCTGTGCAGCGAGCAATCCACCGCGCAATGGCGGCGGGTCG
GAATCGACGAGGATTTCCGGCCGCGCTTCGCCGCGAAGGTGCTGGAGCTTCACGCCGAGGCGCGGCAGGGCTTCTCCACG
GCGGTCGAATGCGCGGTGCGCGGGCCTGTCCACGCCTGCCGCGTCACGATCGCGCATCCCCACCGCAATTTCGGTCCGAA
GATTCCGAATCTGCTGTCGGCGGTGTGCGGCGAGGGGGTGTTCTTCTCGCCCGGCATCCCGCTGATCCGGCTGCAGGACA
TCCGGTTTCCGGACAGCTACCTCGCGGCGTTCGAAGGCCCGCGCTTCGGCATCGCCGGCCTGCGCGAGCGGCTGCAGGCG
TTCGACCGGCCGATCTTCTTCGGCGTGATCAAGCCGAATATCGGGCTGCCGGCGGCGCCGTTCGCCGAACTCGGTTACCA
GAGCTGGCGCGGCGGCCTCGATATCGCCAAGGACGACGAGATGCTGGCGGATGTCGACTGGTGCCCGCTCGCCGAGCGCG
CGGCGCTGCTCGGCGACGCCTGCCGGAAGGCCGCGGCCGAGACCGGGGTGCCGAAAATCTACCTCGCCAATATCACCGAC
GAAGTGGACCGGCTGATCGAGCTGCACGATGTCGCGGTGGCAAACGGCGCCGGCGCGCTGCTGATCAACGCGATGCCGGT
GGGTCTGTCGGCGGTGCGGATGCTGCGCCGGCATGCCACGGTGCCGCTGATCGCGCATTTCCCGTTCATCGCCGCGTTCA
GCCGGCTCGCCACTTACGGAATCCATTCGCGGGTGATGACGCGGCTGCAGCGGCTGGCCGGTTTCGACGTGGTGATCATG
CCGGGCTTCGGGCCGCGGATGATGACGCCGGAGCACGAGGTGCTGGAGTGCGTGCGCGCCTGCCTCGAACCGATGGGGCC
GATCAAACCGTGCCTGCCGGTGCCGGGCGGCAGCGATTCCGCCGCGACGCTGGAGCGGGTGTATCGCAAGGTCGGCAGCG
TCGATTTCGGCTTCGTGCCAGGCCGCGGCGTGTTCGGCCACCCGATGGGACCGGCGGCGGGCGCCGCCAGTCTCCGACAG
GCGTGGGACGCAATCGCCGCCGGGATTCCGGTCGGCGAGCATGCCGCGAGTCATCCGGAACTCGCGGCGGCGTTGCAGGC
GTTCGGCGATCGCTGA

Upstream 100 bases:

>100_bases
GACCGCTGCAGGCCTATGCCTCCAAAGGATGGGGCTCTTTGCGATGGAACCGCGGGTCGAGCCCGCGTATGACGGCTTGG
TATCTGGAGCGGACGACCCC

Downstream 100 bases:

>100_bases
GTCCGCTGCGGTCTCGCCGCGCTCAGCGCGGCAGTTCGGTGAAGGTGACGATCACTGCGGTGCGACGGCCCTGCGTCAAG
GCAGCGTCGCGGTGGATGCC

Product: rubisco-like protein Rlp2

Products: 3-phospho-D-glycerate; H+

Alternate protein names: RuBisCO-like protein [H]

Number of amino acids: Translated: 431; Mature: 430

Protein sequence:

>431_residues
MTPDDIAGFYATRAELNPDDYIELDFDFECAGDPREAAAHLCSEQSTAQWRRVGIDEDFRPRFAAKVLELHAEARQGFST
AVECAVRGPVHACRVTIAHPHRNFGPKIPNLLSAVCGEGVFFSPGIPLIRLQDIRFPDSYLAAFEGPRFGIAGLRERLQA
FDRPIFFGVIKPNIGLPAAPFAELGYQSWRGGLDIAKDDEMLADVDWCPLAERAALLGDACRKAAAETGVPKIYLANITD
EVDRLIELHDVAVANGAGALLINAMPVGLSAVRMLRRHATVPLIAHFPFIAAFSRLATYGIHSRVMTRLQRLAGFDVVIM
PGFGPRMMTPEHEVLECVRACLEPMGPIKPCLPVPGGSDSAATLERVYRKVGSVDFGFVPGRGVFGHPMGPAAGAASLRQ
AWDAIAAGIPVGEHAASHPELAAALQAFGDR

Sequences:

>Translated_431_residues
MTPDDIAGFYATRAELNPDDYIELDFDFECAGDPREAAAHLCSEQSTAQWRRVGIDEDFRPRFAAKVLELHAEARQGFST
AVECAVRGPVHACRVTIAHPHRNFGPKIPNLLSAVCGEGVFFSPGIPLIRLQDIRFPDSYLAAFEGPRFGIAGLRERLQA
FDRPIFFGVIKPNIGLPAAPFAELGYQSWRGGLDIAKDDEMLADVDWCPLAERAALLGDACRKAAAETGVPKIYLANITD
EVDRLIELHDVAVANGAGALLINAMPVGLSAVRMLRRHATVPLIAHFPFIAAFSRLATYGIHSRVMTRLQRLAGFDVVIM
PGFGPRMMTPEHEVLECVRACLEPMGPIKPCLPVPGGSDSAATLERVYRKVGSVDFGFVPGRGVFGHPMGPAAGAASLRQ
AWDAIAAGIPVGEHAASHPELAAALQAFGDR
>Mature_430_residues
TPDDIAGFYATRAELNPDDYIELDFDFECAGDPREAAAHLCSEQSTAQWRRVGIDEDFRPRFAAKVLELHAEARQGFSTA
VECAVRGPVHACRVTIAHPHRNFGPKIPNLLSAVCGEGVFFSPGIPLIRLQDIRFPDSYLAAFEGPRFGIAGLRERLQAF
DRPIFFGVIKPNIGLPAAPFAELGYQSWRGGLDIAKDDEMLADVDWCPLAERAALLGDACRKAAAETGVPKIYLANITDE
VDRLIELHDVAVANGAGALLINAMPVGLSAVRMLRRHATVPLIAHFPFIAAFSRLATYGIHSRVMTRLQRLAGFDVVIMP
GFGPRMMTPEHEVLECVRACLEPMGPIKPCLPVPGGSDSAATLERVYRKVGSVDFGFVPGRGVFGHPMGPAAGAASLRQA
WDAIAAGIPVGEHAASHPELAAALQAFGDR

Specific function: May be involved in sulfur metabolism and oxidative stress response. Does not show RuBisCO activity [H]

COG id: COG1850

COG function: function code G; Ribulose 1,5-bisphosphate carboxylase, large subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RuBisCO large chain family. Type IV subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000685
- InterPro:   IPR017443 [H]

Pfam domain/function: PF00016 RuBisCO_large [H]

EC number: 4.1.1.39

Molecular weight: Translated: 46521; Mature: 46390

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPDDIAGFYATRAELNPDDYIELDFDFECAGDPREAAAHLCSEQSTAQWRRVGIDEDFR
CCCCHHHHHHHCCCCCCCCCEEEEEECEECCCCHHHHHHHHHCCHHHHHHHHCCCCCCCC
PRFAAKVLELHAEARQGFSTAVECAVRGPVHACRVTIAHPHRNFGPKIPNLLSAVCGEGV
HHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCE
FFSPGIPLIRLQDIRFPDSYLAAFEGPRFGIAGLRERLQAFDRPIFFGVIKPNIGLPAAP
EECCCCCEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCC
FAELGYQSWRGGLDIAKDDEMLADVDWCPLAERAALLGDACRKAAAETGVPKIYLANITD
HHHHCHHHHCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCHH
EVDRLIELHDVAVANGAGALLINAMPVGLSAVRMLRRHATVPLIAHFPFIAAFSRLATYG
HHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
IHSRVMTRLQRLAGFDVVIMPGFGPRMMTPEHEVLECVRACLEPMGPIKPCLPVPGGSDS
HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCH
AATLERVYRKVGSVDFGFVPGRGVFGHPMGPAAGAASLRQAWDAIAAGIPVGEHAASHPE
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHH
LAAALQAFGDR
HHHHHHHHCCC
>Mature Secondary Structure 
TPDDIAGFYATRAELNPDDYIELDFDFECAGDPREAAAHLCSEQSTAQWRRVGIDEDFR
CCCHHHHHHHCCCCCCCCCEEEEEECEECCCCHHHHHHHHHCCHHHHHHHHCCCCCCCC
PRFAAKVLELHAEARQGFSTAVECAVRGPVHACRVTIAHPHRNFGPKIPNLLSAVCGEGV
HHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCE
FFSPGIPLIRLQDIRFPDSYLAAFEGPRFGIAGLRERLQAFDRPIFFGVIKPNIGLPAAP
EECCCCCEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCC
FAELGYQSWRGGLDIAKDDEMLADVDWCPLAERAALLGDACRKAAAETGVPKIYLANITD
HHHHCHHHHCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCHH
EVDRLIELHDVAVANGAGALLINAMPVGLSAVRMLRRHATVPLIAHFPFIAAFSRLATYG
HHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
IHSRVMTRLQRLAGFDVVIMPGFGPRMMTPEHEVLECVRACLEPMGPIKPCLPVPGGSDS
HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCH
AATLERVYRKVGSVDFGFVPGRGVFGHPMGPAAGAASLRQAWDAIAAGIPVGEHAASHPE
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHH
LAAALQAFGDR
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: D-ribulose 1,5-bisphosphate; CO2; H2O

Specific reaction: D-ribulose 1,5-bisphosphate + CO2 + H2O = 2 3-phospho-D-glycerate + 2 H+

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA