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The map label for this gene is yjbQ [C]

Identifier: 86747427

GI number: 86747427

Start: 341649

End: 342131

Strand: Reverse

Name: yjbQ [C]

Synonym: RPB_0301

Alternate gene names: 86747427

Gene position: 342131-341649 (Counterclockwise)

Preceding gene: 86747429

Following gene: 86747426

Centisome position: 6.42

GC content: 65.22

Gene sequence:

>483_bases
TTGCGCGTTCCACACGCGGGCGACCTCGCCCGACTTCGAACGCCGGATGCCGCGATGAACATCGTCAGACACAGGATCGA
ACTCGCCACCACGGCGCCGATCCAGATCATCGACATCACCGAGCAGGTCCGCGGCTTCGTCGCCGGCAGCGGGCTGAAAG
ACGGCCTCGTCACCGTGAGCTGCCTGCACACCACGGCGCGGATCAACGTCAACGAGCGCGAGGAGAAGCTCGAGCGCGAC
ATGCTGACGTTTCTGAAGCGCGTCGCGCCGCGCGACGGCGACTATCTGCACAACCTCGCCCCGATCGACGGCCGCGACAA
CGCGCATTCGCATCTGATCGGGCTGTTCATGAATTCATCGGAGACGATCCCGCTTGCCGCCGGCGCGCTGGTGCTGGGCG
AATGGCAATCGATCTTCTTCATCGAGCTCGACGGCCCGCGCGAGCGCCGCGGCGTCGAATTGCAGATCATCGGGCAGGGT
TAG

Upstream 100 bases:

>100_bases
AAGCCCGGCGGCGCTGTCAAGCGACCGGCGCTCGCGCGCATCATTCCTTCGGCCAACATGTGGGCCCGGCGTTTGCGTCG
ATTCGGGCGGTGCGCCTACA

Downstream 100 bases:

>100_bases
ACCGCTGCAGGCCTATGCCTCCAAAGGATGGGGCTCTTTGCGATGGAACCGCGGGTCGAGCCCGCGTATGACGGCTTGGT
ATCTGGAGCGGACGACCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MRVPHAGDLARLRTPDAAMNIVRHRIELATTAPIQIIDITEQVRGFVAGSGLKDGLVTVSCLHTTARINVNEREEKLERD
MLTFLKRVAPRDGDYLHNLAPIDGRDNAHSHLIGLFMNSSETIPLAAGALVLGEWQSIFFIELDGPRERRGVELQIIGQG

Sequences:

>Translated_160_residues
MRVPHAGDLARLRTPDAAMNIVRHRIELATTAPIQIIDITEQVRGFVAGSGLKDGLVTVSCLHTTARINVNEREEKLERD
MLTFLKRVAPRDGDYLHNLAPIDGRDNAHSHLIGLFMNSSETIPLAAGALVLGEWQSIFFIELDGPRERRGVELQIIGQG
>Mature_160_residues
MRVPHAGDLARLRTPDAAMNIVRHRIELATTAPIQIIDITEQVRGFVAGSGLKDGLVTVSCLHTTARINVNEREEKLERD
MLTFLKRVAPRDGDYLHNLAPIDGRDNAHSHLIGLFMNSSETIPLAAGALVLGEWQSIFFIELDGPRERRGVELQIIGQG

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 17697; Mature: 17697

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVPHAGDLARLRTPDAAMNIVRHRIELATTAPIQIIDITEQVRGFVAGSGLKDGLVTVS
CCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHCCCCCCCCCEEEE
CLHTTARINVNEREEKLERDMLTFLKRVAPRDGDYLHNLAPIDGRDNAHSHLIGLFMNSS
EEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCEEEEEEECCC
ETIPLAAGALVLGEWQSIFFIELDGPRERRGVELQIIGQG
CCCEEECCEEEEECCCEEEEEEECCCCHHCCEEEEEEECC
>Mature Secondary Structure
MRVPHAGDLARLRTPDAAMNIVRHRIELATTAPIQIIDITEQVRGFVAGSGLKDGLVTVS
CCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHCCCCCCCCCEEEE
CLHTTARINVNEREEKLERDMLTFLKRVAPRDGDYLHNLAPIDGRDNAHSHLIGLFMNSS
EEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCEEEEEEECCC
ETIPLAAGALVLGEWQSIFFIELDGPRERRGVELQIIGQG
CCCEEECCEEEEECCCEEEEEEECCCCHHCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]