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The map label for this gene is 86747424

Identifier: 86747424

GI number: 86747424

Start: 338107

End: 338922

Strand: Direct

Name: 86747424

Synonym: RPB_0298

Alternate gene names: NA

Gene position: 338107-338922 (Clockwise)

Preceding gene: 86747419

Following gene: 86747425

Centisome position: 6.34

GC content: 67.65

Gene sequence:

>816_bases
GTGCGTGCCGTGCATCCAGAAAGCGCCGTGCATCCAGAAAGCATCGTCTCGACGGTCATCCCGCATCTCCTCGTGAAGCA
CGCCGCCGCACCCGCGCGGCTCCGTGCCGCCAAAGACCCCGCCGACGCTCGCGCCGATGAATTGGCCCGGCTGCTGATTG
CGCCCAACCTCGACGATGCCTTCGACCTGATCGACCATTCGCTGACCCGCGCGGCCTCGCCGACCGCGTTGTTCACCGGA
CTGTTCGAGTCGACCGCGCGCAAGCTCGGCGATCTGTGGAGCGAGGATGCGTGCAGCGAATTCGAGGTCGCGATCGGCCT
GTGCCATCTGCAGACCGCGATGCGCCGCATCAGCTTCGATCTGCTGTCGGCGCCGCTGACGCGCTCGCAGCCGCGCACGG
TGCTGGTGATTACGCAGCCCGGCGAGCCGCATTCGTTTTGCGCGGCGTTGCATTCCGAATTGCTGCACCAGGCCGGCTGG
AACACGGTCGGCGAATTTCCCGACAGCGAAAAGGCGCTCACCGATTTGGTCGCCAATGGCTGGTTCGATGCGGTCAACCT
GTCGCTCAGCCCGTCGTTGCGCCGCGAGCACTGGCTGCCCCGCGTCGCCGAGACCATCCGCAAGATCCGCAAAGCCTCGC
GCAATCCGGCGCTCGCCGTCGTCGCCAGCGGTCGCGTCTTTGCAGAACGCGCCGATGCCTGCGCGCTGGTCGGCGCCGAC
GCCGCGACCGTCTCCTCCGTCCAGATCGAGCGCTGCCTGATGCGCTCGCTGCTCAACCGCACCGCCCGCCCGGCGGCGAA
CTTCGCCTGGATCTGA

Upstream 100 bases:

>100_bases
GAGCTCGTGACCGCACGAGGAAACCCCGATCTGCTCCCTCGGCAGTCTCGCTGGGTCACGACAGTGCCAATTCCCGATGG
TCCGAGGGCAACCAGATCGA

Downstream 100 bases:

>100_bases
ATCCCGAACTTCCCGTTGATGCCCTGCGCCGTGACCATCCGCCGCGCCGCCGGCGATCTCGTGTCGTGCGCTAAGCGCCA
ATGCGCTTCGGCGGGCGCGC

Product: AppA/PpaA family photosynthesis gene regulator

Products: NA

Alternate protein names: AppA/PpaA Family Photosynthesis Gene Regulator

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MRAVHPESAVHPESIVSTVIPHLLVKHAAAPARLRAAKDPADARADELARLLIAPNLDDAFDLIDHSLTRAASPTALFTG
LFESTARKLGDLWSEDACSEFEVAIGLCHLQTAMRRISFDLLSAPLTRSQPRTVLVITQPGEPHSFCAALHSELLHQAGW
NTVGEFPDSEKALTDLVANGWFDAVNLSLSPSLRREHWLPRVAETIRKIRKASRNPALAVVASGRVFAERADACALVGAD
AATVSSVQIERCLMRSLLNRTARPAANFAWI

Sequences:

>Translated_271_residues
MRAVHPESAVHPESIVSTVIPHLLVKHAAAPARLRAAKDPADARADELARLLIAPNLDDAFDLIDHSLTRAASPTALFTG
LFESTARKLGDLWSEDACSEFEVAIGLCHLQTAMRRISFDLLSAPLTRSQPRTVLVITQPGEPHSFCAALHSELLHQAGW
NTVGEFPDSEKALTDLVANGWFDAVNLSLSPSLRREHWLPRVAETIRKIRKASRNPALAVVASGRVFAERADACALVGAD
AATVSSVQIERCLMRSLLNRTARPAANFAWI
>Mature_271_residues
MRAVHPESAVHPESIVSTVIPHLLVKHAAAPARLRAAKDPADARADELARLLIAPNLDDAFDLIDHSLTRAASPTALFTG
LFESTARKLGDLWSEDACSEFEVAIGLCHLQTAMRRISFDLLSAPLTRSQPRTVLVITQPGEPHSFCAALHSELLHQAGW
NTVGEFPDSEKALTDLVANGWFDAVNLSLSPSLRREHWLPRVAETIRKIRKASRNPALAVVASGRVFAERADACALVGAD
AATVSSVQIERCLMRSLLNRTARPAANFAWI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29455; Mature: 29455

Theoretical pI: Translated: 7.31; Mature: 7.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAVHPESAVHPESIVSTVIPHLLVKHAAAPARLRAAKDPADARADELARLLIAPNLDDA
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCCHH
FDLIDHSLTRAASPTALFTGLFESTARKLGDLWSEDACSEFEVAIGLCHLQTAMRRISFD
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
LLSAPLTRSQPRTVLVITQPGEPHSFCAALHSELLHQAGWNTVGEFPDSEKALTDLVANG
HHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHC
WFDAVNLSLSPSLRREHWLPRVAETIRKIRKASRNPALAVVASGRVFAERADACALVGAD
CHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHCCHHEEECCC
AATVSSVQIERCLMRSLLNRTARPAANFAWI
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MRAVHPESAVHPESIVSTVIPHLLVKHAAAPARLRAAKDPADARADELARLLIAPNLDDA
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCCHH
FDLIDHSLTRAASPTALFTGLFESTARKLGDLWSEDACSEFEVAIGLCHLQTAMRRISFD
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
LLSAPLTRSQPRTVLVITQPGEPHSFCAALHSELLHQAGWNTVGEFPDSEKALTDLVANG
HHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHC
WFDAVNLSLSPSLRREHWLPRVAETIRKIRKASRNPALAVVASGRVFAERADACALVGAD
CHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHCCHHEEECCC
AATVSSVQIERCLMRSLLNRTARPAANFAWI
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA