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The map label for this gene is ctpA [H]

Identifier: 86747384

GI number: 86747384

Start: 290963

End: 292336

Strand: Direct

Name: ctpA [H]

Synonym: RPB_0258

Alternate gene names: 86747384

Gene position: 290963-292336 (Clockwise)

Preceding gene: 86747383

Following gene: 86747385

Centisome position: 5.46

GC content: 65.07

Gene sequence:

>1374_bases
ATGATGCGCAAGACTTCGGTAATCCTCCTCAGCGCCGTTACCGGTGCCGCGCTGACACTTTTCGTCACCCAGCCCCGTTC
GGTGCTGATGGGCTCGACCGCGCGCGCTGCGACGTCTGATACTTACCGTCAGCTCAATTTGTTCGGCGACGTGTTCGAGC
GGGTCCGCAGCGACTATGTCGAGAAGCCCGACGACAGCAAGCTGATCGAATCCTCGATCAGCGGCATGCTCACCGGGCTC
GATCCGCATTCGAGCTACATGGATGCCAAGAGCTTCCGCGACATGCAGGTGCAGACCCGCGGCGAGTTCGGCGGTCTCGG
CATCGAGGTCACGATGGAAGATGGCCTGATCAAGGTGGTGTCGCCGATCGACGACACCCCGGCGTCGAAAGCCGGCATCA
TGGCCAATGACATCATCACCAATCTGGACGACGAGGCGGTGCAGGGTCTGACCCTGAACCAGGCCGTCGAGAAGATGCGC
GGACCGGTCAATACCAAGATCCGGCTGAAGATCATGCGCAAGGGCCAGGACAATCCGATCGAGGTCACGCTGGTGCGCGA
CAACATCCGGGTCCGGTCGGTGCGCGCGCGCGTCGAGTCCGACGACATCGGCTACATCCGCATCACCACCTTCAACGAGC
AGACCACCGAGGGCCTGAAGCGGGAGATCGCCAATCTCACCAAGCAGATCGGCGCCGACAAGCTGAAGGGCTTCATTCTC
GACCTGCGCAACAATCCGGGCGGCCTGCTCGAGGAAGCGGTGACGGTCTCCGACACCTTCCTCGATCGCGGCGAGATCGT
CTCGACGCGCGGCCGCAACGCCGAGGAAACCCAGCGCCGCTCCGCTCATGCCGGCGACCTCACCAAGGGCAAGCCGGTGA
TGGTGCTGATCAACGGTGGCTCGGCCTCGGCCTCGGAAATCGTCGCCGGCGCGTTGCAGGACCACAAGCGCGCGACGCTG
ATCGGCACCCGTTCGTTCGGCAAGGGCTCGGTGCAGACCATCATCCCGCTCGGAAGCGGAAACGGTGCGCTGCGGCTCAC
CACCGCGCGCTACTACACGCCGTCGGGCAAGTCGATCCAGGCCAAGGGCATCACCCCGGACATCGAAGTGCTGCAGGACG
TGCCGGACGATCTCAAGGCCCGCACCGACACCAAGGGCGAGGCCTCGCTGCGCGGCCATCTGAAGGGCCAGGACGGCGAC
GAGAAGACCGGCTCGCAGTCCTACGTGCCGCCGGAGGCCAAGGACGACAAGGCGCTGAAGACCGCCGCCGATCTGCTGCA
CGGCATCAAGGCGACCGCCACTACGCCGACGGCGCCGGTCACCGGCGAGAAGGCGGCGATCGACAAGCCGGCCGGCAACA
AGGCCGCGAACTGA

Upstream 100 bases:

>100_bases
ACGCCACGCAGCCCGTGCTCTATATCGAGTTCCGTAAGGACGGCACTCCCATCGACCCAGGCCCATGGTGGGCCGCAAAT
GAAGGCGAAAAGGTTCGCGG

Downstream 100 bases:

>100_bases
TCGATCGCGACTGTTCGGTTTCTCTGCGAAGGGCGGCTCTCGGGCCGCCCTTTTTGATGAGCAGGTCCGCGTGGTTGCGG
GCCGGCGATCCCGCCGCCGC

Product: carboxyl-terminal protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 457; Mature: 457

Protein sequence:

>457_residues
MMRKTSVILLSAVTGAALTLFVTQPRSVLMGSTARAATSDTYRQLNLFGDVFERVRSDYVEKPDDSKLIESSISGMLTGL
DPHSSYMDAKSFRDMQVQTRGEFGGLGIEVTMEDGLIKVVSPIDDTPASKAGIMANDIITNLDDEAVQGLTLNQAVEKMR
GPVNTKIRLKIMRKGQDNPIEVTLVRDNIRVRSVRARVESDDIGYIRITTFNEQTTEGLKREIANLTKQIGADKLKGFIL
DLRNNPGGLLEEAVTVSDTFLDRGEIVSTRGRNAEETQRRSAHAGDLTKGKPVMVLINGGSASASEIVAGALQDHKRATL
IGTRSFGKGSVQTIIPLGSGNGALRLTTARYYTPSGKSIQAKGITPDIEVLQDVPDDLKARTDTKGEASLRGHLKGQDGD
EKTGSQSYVPPEAKDDKALKTAADLLHGIKATATTPTAPVTGEKAAIDKPAGNKAAN

Sequences:

>Translated_457_residues
MMRKTSVILLSAVTGAALTLFVTQPRSVLMGSTARAATSDTYRQLNLFGDVFERVRSDYVEKPDDSKLIESSISGMLTGL
DPHSSYMDAKSFRDMQVQTRGEFGGLGIEVTMEDGLIKVVSPIDDTPASKAGIMANDIITNLDDEAVQGLTLNQAVEKMR
GPVNTKIRLKIMRKGQDNPIEVTLVRDNIRVRSVRARVESDDIGYIRITTFNEQTTEGLKREIANLTKQIGADKLKGFIL
DLRNNPGGLLEEAVTVSDTFLDRGEIVSTRGRNAEETQRRSAHAGDLTKGKPVMVLINGGSASASEIVAGALQDHKRATL
IGTRSFGKGSVQTIIPLGSGNGALRLTTARYYTPSGKSIQAKGITPDIEVLQDVPDDLKARTDTKGEASLRGHLKGQDGD
EKTGSQSYVPPEAKDDKALKTAADLLHGIKATATTPTAPVTGEKAAIDKPAGNKAAN
>Mature_457_residues
MMRKTSVILLSAVTGAALTLFVTQPRSVLMGSTARAATSDTYRQLNLFGDVFERVRSDYVEKPDDSKLIESSISGMLTGL
DPHSSYMDAKSFRDMQVQTRGEFGGLGIEVTMEDGLIKVVSPIDDTPASKAGIMANDIITNLDDEAVQGLTLNQAVEKMR
GPVNTKIRLKIMRKGQDNPIEVTLVRDNIRVRSVRARVESDDIGYIRITTFNEQTTEGLKREIANLTKQIGADKLKGFIL
DLRNNPGGLLEEAVTVSDTFLDRGEIVSTRGRNAEETQRRSAHAGDLTKGKPVMVLINGGSASASEIVAGALQDHKRATL
IGTRSFGKGSVQTIIPLGSGNGALRLTTARYYTPSGKSIQAKGITPDIEVLQDVPDDLKARTDTKGEASLRGHLKGQDGD
EKTGSQSYVPPEAKDDKALKTAADLLHGIKATATTPTAPVTGEKAAIDKPAGNKAAN

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=320, Percent_Identity=30.9375, Blast_Score=134, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 49018; Mature: 49018

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRKTSVILLSAVTGAALTLFVTQPRSVLMGSTARAATSDTYRQLNLFGDVFERVRSDYV
CCCCCEEEEEEECCCCEEEEEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
EKPDDSKLIESSISGMLTGLDPHSSYMDAKSFRDMQVQTRGEFGGLGIEVTMEDGLIKVV
CCCCHHHHHHHHHHHEEECCCCCCHHHHHHHHCCCEEEECCCCCCEEEEEEECCCEEEEE
SPIDDTPASKAGIMANDIITNLDDEAVQGLTLNQAVEKMRGPVNTKIRLKIMRKGQDNPI
CCCCCCCCCCCCCCHHHHHHCCCHHHHCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCE
EVTLVRDNIRVRSVRARVESDDIGYIRITTFNEQTTEGLKREIANLTKQIGADKLKGFIL
EEEEEECCCEEEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCHHHHCEEEE
DLRNNPGGLLEEAVTVSDTFLDRGEIVSTRGRNAEETQRRSAHAGDLTKGKPVMVLINGG
EECCCCCCHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHCCCCCCCCCCCEEEEEECC
SASASEIVAGALQDHKRATLIGTRSFGKGSVQTIIPLGSGNGALRLTTARYYTPSGKSIQ
CCCHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCEEE
AKGITPDIEVLQDVPDDLKARTDTKGEASLRGHLKGQDGDEKTGSQSYVPPEAKDDKALK
ECCCCCHHHHHHCCCHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHH
TAADLLHGIKATATTPTAPVTGEKAAIDKPAGNKAAN
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMRKTSVILLSAVTGAALTLFVTQPRSVLMGSTARAATSDTYRQLNLFGDVFERVRSDYV
CCCCCEEEEEEECCCCEEEEEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
EKPDDSKLIESSISGMLTGLDPHSSYMDAKSFRDMQVQTRGEFGGLGIEVTMEDGLIKVV
CCCCHHHHHHHHHHHEEECCCCCCHHHHHHHHCCCEEEECCCCCCEEEEEEECCCEEEEE
SPIDDTPASKAGIMANDIITNLDDEAVQGLTLNQAVEKMRGPVNTKIRLKIMRKGQDNPI
CCCCCCCCCCCCCCHHHHHHCCCHHHHCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCE
EVTLVRDNIRVRSVRARVESDDIGYIRITTFNEQTTEGLKREIANLTKQIGADKLKGFIL
EEEEEECCCEEEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCHHHHCEEEE
DLRNNPGGLLEEAVTVSDTFLDRGEIVSTRGRNAEETQRRSAHAGDLTKGKPVMVLINGG
EECCCCCCHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHCCCCCCCCCCCEEEEEECC
SASASEIVAGALQDHKRATLIGTRSFGKGSVQTIIPLGSGNGALRLTTARYYTPSGKSIQ
CCCHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCEEE
AKGITPDIEVLQDVPDDLKARTDTKGEASLRGHLKGQDGDEKTGSQSYVPPEAKDDKALK
ECCCCCHHHHHHCCCHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHH
TAADLLHGIKATATTPTAPVTGEKAAIDKPAGNKAAN
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]