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The map label for this gene is yibP [C]

Identifier: 86747383

GI number: 86747383

Start: 289581

End: 290966

Strand: Direct

Name: yibP [C]

Synonym: RPB_0257

Alternate gene names: 86747383

Gene position: 289581-290966 (Clockwise)

Preceding gene: 86747382

Following gene: 86747384

Centisome position: 5.43

GC content: 67.82

Gene sequence:

>1386_bases
ATGCAACACCACCTTGCCACGGCTGCGAAGGACCAAGCCTCGGGTGCGGGCTGGCCGTCGGTCGCGCTGCTCTCGGCGAG
CCTCGTCTCCGGTGGATTGGTTTTGATGTCGGGCGCGACCATTGTCGCGGCGCAGGCGCAGACAGTCCCGGCCGCGGTGC
CGGCGCCACCGCCGACCATCGATCTGATCCGGCAACGCGAACAGGAACTCGAAGCCGCGCGCCAGCAGCAGAAACGCGCC
ACCGAGCTGCAGGACAAGCTCAGGGCGGATCTCGCCGCGATCGGTGAGGATCGCACCAAACTCAATCAGCAACTGATCGA
CATCGCCGCCAAGGTCCGCGCGGTCGAAGCCCGCATCAGCGAGGCCGAAGCGCGGTTGGTTCCGCTCGACGCCCGCGAGA
GCCGGATCCGCACGTCGCTCGATCAGCGCCGCGGCGAAATCGGCGAAGTTCTGGCCGCGCTGCAGCGCGCCGGTCGCCGT
GCGCCGCCGGCGCTGCTGGTCCGCCCCGAAGATGCGCTGAAATCACTTCGCACAGCGATCCTGCTCGGCGCCGTGGTGCC
CGACTTGCGCGAGCGCGCCGACCGGCTCGCCACCGACCTCGGCGAACTGATCGCCGTCCGCAAGACGATCGCCGCGGAGC
GCGACCAGCTCGCCACCGACCGCGGCAGCATGACCGCCGACCAGACCCGGCTCGCCGCGCTGATCGACGAACGTCAGCAC
AAGCAGAGCGGGGTCGAAAAGGATATCGAAACCGAGCGCGCGCGGGCGCTCTCGCTGTCGCGACAGGTCGACAGCCTGCA
GGGCCTGATCGCCAAGATGGAGCAGGACCTCAAGAGCGCCGCGAAGGCCGCCGCCGCCGCGACCCAGAAGGGGAGCCCAG
TGGCGCTCAACGGCCAACCCAATCTGGCGGCGCTGAAGGATCCGGGCCGGCTCAGCCCGGCGGTCGCTTTCGCCTCCGCC
AAAGGTATGCTGGCATTCCCGGTCAATGGCGCCAAGATCCGCGAATTCGGCCGCCCCGACGGGGTCGGCGGGGTGGAACG
CGGGATTTCGCTGTCGGCGAGGCCGGGCGCGCAGGTCACAACCCCGTGTGACGGATGGGTTGTGTATGCCGGACCGTTTC
GCTCCTACGGACAACTCTTGATCCTCAATGCCGGTGGCGGATATCATGTCCTGATCGCCGGGATGGAGCGCATTTCGGTC
AACATCGGCCAATTCGTGCTCACGGGGGAGCCGGTGGCAACCATGGGATCGACATCGCAGGTCGCGTCGATCCTCGCGGC
GAACGCCACGCAGCCCGTGCTCTATATCGAGTTCCGTAAGGACGGCACTCCCATCGACCCAGGCCCATGGTGGGCCGCAA
ATGAAGGCGAAAAGGTTCGCGGATGA

Upstream 100 bases:

>100_bases
CAGATGGTCCGCGTGATGCTGCTGGAGCAGATCTACCGGGCCGCGACGATTTTGGCGGGACATCCTTATCACCGTGCCTA
GCGAGCGCCGCAGCGATCAG

Downstream 100 bases:

>100_bases
TGCGCAAGACTTCGGTAATCCTCCTCAGCGCCGTTACCGGTGCCGCGCTGACACTTTTCGTCACCCAGCCCCGTTCGGTG
CTGATGGGCTCGACCGCGCG

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 461; Mature: 461

Protein sequence:

>461_residues
MQHHLATAAKDQASGAGWPSVALLSASLVSGGLVLMSGATIVAAQAQTVPAAVPAPPPTIDLIRQREQELEAARQQQKRA
TELQDKLRADLAAIGEDRTKLNQQLIDIAAKVRAVEARISEAEARLVPLDARESRIRTSLDQRRGEIGEVLAALQRAGRR
APPALLVRPEDALKSLRTAILLGAVVPDLRERADRLATDLGELIAVRKTIAAERDQLATDRGSMTADQTRLAALIDERQH
KQSGVEKDIETERARALSLSRQVDSLQGLIAKMEQDLKSAAKAAAAATQKGSPVALNGQPNLAALKDPGRLSPAVAFASA
KGMLAFPVNGAKIREFGRPDGVGGVERGISLSARPGAQVTTPCDGWVVYAGPFRSYGQLLILNAGGGYHVLIAGMERISV
NIGQFVLTGEPVATMGSTSQVASILAANATQPVLYIEFRKDGTPIDPGPWWAANEGEKVRG

Sequences:

>Translated_461_residues
MQHHLATAAKDQASGAGWPSVALLSASLVSGGLVLMSGATIVAAQAQTVPAAVPAPPPTIDLIRQREQELEAARQQQKRA
TELQDKLRADLAAIGEDRTKLNQQLIDIAAKVRAVEARISEAEARLVPLDARESRIRTSLDQRRGEIGEVLAALQRAGRR
APPALLVRPEDALKSLRTAILLGAVVPDLRERADRLATDLGELIAVRKTIAAERDQLATDRGSMTADQTRLAALIDERQH
KQSGVEKDIETERARALSLSRQVDSLQGLIAKMEQDLKSAAKAAAAATQKGSPVALNGQPNLAALKDPGRLSPAVAFASA
KGMLAFPVNGAKIREFGRPDGVGGVERGISLSARPGAQVTTPCDGWVVYAGPFRSYGQLLILNAGGGYHVLIAGMERISV
NIGQFVLTGEPVATMGSTSQVASILAANATQPVLYIEFRKDGTPIDPGPWWAANEGEKVRG
>Mature_461_residues
MQHHLATAAKDQASGAGWPSVALLSASLVSGGLVLMSGATIVAAQAQTVPAAVPAPPPTIDLIRQREQELEAARQQQKRA
TELQDKLRADLAAIGEDRTKLNQQLIDIAAKVRAVEARISEAEARLVPLDARESRIRTSLDQRRGEIGEVLAALQRAGRR
APPALLVRPEDALKSLRTAILLGAVVPDLRERADRLATDLGELIAVRKTIAAERDQLATDRGSMTADQTRLAALIDERQH
KQSGVEKDIETERARALSLSRQVDSLQGLIAKMEQDLKSAAKAAAAATQKGSPVALNGQPNLAALKDPGRLSPAVAFASA
KGMLAFPVNGAKIREFGRPDGVGGVERGISLSARPGAQVTTPCDGWVVYAGPFRSYGQLLILNAGGGYHVLIAGMERISV
NIGQFVLTGEPVATMGSTSQVASILAANATQPVLYIEFRKDGTPIDPGPWWAANEGEKVRG

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yibP [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=382, Percent_Identity=21.2041884816754, Blast_Score=66, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 48822; Mature: 48822

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHHLATAAKDQASGAGWPSVALLSASLVSGGLVLMSGATIVAAQAQTVPAAVPAPPPTI
CCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEECCEEEEECCCCCCCCCCCCCCHH
DLIRQREQELEAARQQQKRATELQDKLRADLAAIGEDRTKLNQQLIDIAAKVRAVEARIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
EAEARLVPLDARESRIRTSLDQRRGEIGEVLAALQRAGRRAPPALLVRPEDALKSLRTAI
HHHCEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHH
LLGAVVPDLRERADRLATDLGELIAVRKTIAAERDQLATDRGSMTADQTRLAALIDERQH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
KQSGVEKDIETERARALSLSRQVDSLQGLIAKMEQDLKSAAKAAAAATQKGSPVALNGQP
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCC
NLAALKDPGRLSPAVAFASAKGMLAFPVNGAKIREFGRPDGVGGVERGISLSARPGAQVT
CEEEECCCCCCCHHHHHHCCCCEEEECCCCHHHHHCCCCCCCCHHHHCCEECCCCCCCCC
TPCDGWVVYAGPFRSYGQLLILNAGGGYHVLIAGMERISVNIGQFVLTGEPVATMGSTSQ
CCCCCEEEECCCCCCCCCEEEEECCCCEEEEEECHHHHEEECCEEEECCCCHHHCCCHHH
VASILAANATQPVLYIEFRKDGTPIDPGPWWAANEGEKVRG
HHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQHHLATAAKDQASGAGWPSVALLSASLVSGGLVLMSGATIVAAQAQTVPAAVPAPPPTI
CCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEECCEEEEECCCCCCCCCCCCCCHH
DLIRQREQELEAARQQQKRATELQDKLRADLAAIGEDRTKLNQQLIDIAAKVRAVEARIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
EAEARLVPLDARESRIRTSLDQRRGEIGEVLAALQRAGRRAPPALLVRPEDALKSLRTAI
HHHCEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHH
LLGAVVPDLRERADRLATDLGELIAVRKTIAAERDQLATDRGSMTADQTRLAALIDERQH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
KQSGVEKDIETERARALSLSRQVDSLQGLIAKMEQDLKSAAKAAAAATQKGSPVALNGQP
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCC
NLAALKDPGRLSPAVAFASAKGMLAFPVNGAKIREFGRPDGVGGVERGISLSARPGAQVT
CEEEECCCCCCCHHHHHHCCCCEEEECCCCHHHHHCCCCCCCCHHHHCCEECCCCCCCCC
TPCDGWVVYAGPFRSYGQLLILNAGGGYHVLIAGMERISVNIGQFVLTGEPVATMGSTSQ
CCCCCEEEECCCCCCCCCEEEEECCCCEEEEEECHHHHEEECCEEEECCCCHHHCCCHHH
VASILAANATQPVLYIEFRKDGTPIDPGPWWAANEGEKVRG
HHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]