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The map label for this gene is ybeB [H]

Identifier: 86747381

GI number: 86747381

Start: 288568

End: 288975

Strand: Direct

Name: ybeB [H]

Synonym: RPB_0255

Alternate gene names: 86747381

Gene position: 288568-288975 (Clockwise)

Preceding gene: 86747380

Following gene: 86747382

Centisome position: 5.41

GC content: 62.25

Gene sequence:

>408_bases
ATGGCTGCCGCTTCGCGATCCGCCGCTGAATCGCTGACTCCCGATGCGATCTCCGCGACGCCGTTGACGGCCGAGGAGAC
GCTGCAACTGATCCTCTCCCGCCTCGACGACATGAAGGCGGAGGAGCCGATCGCCATCGATATCCGTGGCAAGTCGGCCA
TGTTCGACTACGTCGTCGTCGCCAGCGGTCGGGTGAACCGCCATGTCGGCGCGATCGCCGAAAACGTCGCGAAGGCGCTG
AAGGAAGCCGGCATCACCAAGATCCACGTCGAGGGCCTGACCAATTGCGATTGGGTGCTGATGGATTGCGGCGACGTGGT
GCTGCACGTGTTCAGGCCGGAGGTTCGCGAGTTCTACAATATCGAACGATTGTGGACTCAGGGACCTCAACCGGCGAAGA
CGCTGTAG

Upstream 100 bases:

>100_bases
TGTATTGTCCAAGTCGGCTCTGCCGAAGCCGGCCGCCGCGAAGGCGGTCAAGTCCAGGACGGCGACTTCGAAGACTGCAA
ACTCGAAGGCTCCCACCTCG

Downstream 100 bases:

>100_bases
CCGTCGAGATCTTGCCCGCGCTGTCCGCGAGCGCGTGTATGCATGTGCGTGTCTCTCAGTCGACGCCTGAGACAGGACGG
CGCAGCGCGGGGAGCGCAAG

Product: Iojap-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MAAASRSAAESLTPDAISATPLTAEETLQLILSRLDDMKAEEPIAIDIRGKSAMFDYVVVASGRVNRHVGAIAENVAKAL
KEAGITKIHVEGLTNCDWVLMDCGDVVLHVFRPEVREFYNIERLWTQGPQPAKTL

Sequences:

>Translated_135_residues
MAAASRSAAESLTPDAISATPLTAEETLQLILSRLDDMKAEEPIAIDIRGKSAMFDYVVVASGRVNRHVGAIAENVAKAL
KEAGITKIHVEGLTNCDWVLMDCGDVVLHVFRPEVREFYNIERLWTQGPQPAKTL
>Mature_134_residues
AAASRSAAESLTPDAISATPLTAEETLQLILSRLDDMKAEEPIAIDIRGKSAMFDYVVVASGRVNRHVGAIAENVAKALK
EAGITKIHVEGLTNCDWVLMDCGDVVLHVFRPEVREFYNIERLWTQGPQPAKTL

Specific function: Unknown

COG id: COG0799

COG function: function code S; Uncharacterized homolog of plant Iojap protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Iojap family [H]

Homologues:

Organism=Homo sapiens, GI19923977, Length=116, Percent_Identity=30.1724137931034, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI87081768, Length=97, Percent_Identity=37.1134020618557, Blast_Score=93, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004394 [H]

Pfam domain/function: PF02410 DUF143 [H]

EC number: NA

Molecular weight: Translated: 14747; Mature: 14616

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAASRSAAESLTPDAISATPLTAEETLQLILSRLDDMKAEEPIAIDIRGKSAMFDYVVV
CCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHEEEE
ASGRVNRHVGAIAENVAKALKEAGITKIHVEGLTNCDWVLMDCGDVVLHVFRPEVREFYN
ECCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEHHHHHHHHHHCHHHHHHHH
IERLWTQGPQPAKTL
HHHHHCCCCCCCCCC
>Mature Secondary Structure 
AAASRSAAESLTPDAISATPLTAEETLQLILSRLDDMKAEEPIAIDIRGKSAMFDYVVV
CCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHEEEE
ASGRVNRHVGAIAENVAKALKEAGITKIHVEGLTNCDWVLMDCGDVVLHVFRPEVREFYN
ECCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEHHHHHHHHHHCHHHHHHHH
IERLWTQGPQPAKTL
HHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]