| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is ynaD [H]
Identifier: 86747370
GI number: 86747370
Start: 278258
End: 278812
Strand: Direct
Name: ynaD [H]
Synonym: RPB_0244
Alternate gene names: 86747370
Gene position: 278258-278812 (Clockwise)
Preceding gene: 86747369
Following gene: 86747372
Centisome position: 5.22
GC content: 60.18
Gene sequence:
>555_bases ATGGGAGTCGAGAAACCATCGATGGACGCGATTGAAACCGAGCGACTGGCCTTGCGAGACTTCCGGTCGGAAGACGCCGC CGACCTGTTCGCCTATTTGCATCAGCCGACGGCGAGCTGCTTTTTGTCGCTCAGTCTCGCGGATATGGGCGCCGCAGCGG CGGAGGCGAACGCGCGCAGTCAAAGTGACGAGCACATTGCGGTCTGCTTCAAAGACACAGGCCGACTGATCGGCGACCTG TTCGCGGTCCAGGAGGACGACACGTTCTCGGTCGGCTGGAACTTCAATGCGGATTTCAGGGGCGCCGGGCTGGCGTCGGA AGCCGCACGCGCCCTGTTCGGGCATCTTTTCACCGTCAGGCAGGCCCGGCGCCTCTACGCTTATGTCGAGGACCACAACA TCGCATCGCAACGTCTGTGCAAGAGACTGGGAATGCGGCAGGAAGGACTGTTCAAGGAGTATGTGACGTTCAAGGCCGAC AGCAAAGGTGTTCCGATCTACGAGAACACGATGCAGTTCGCCATCCTCCGTAAGGAATGGGAGCAGCAGCACTGA
Upstream 100 bases:
>100_bases ACAAGGTCCGCGTGCACGACGCGTTCCTGCTGCCGTCAGTCCGCAGAGCCGTCGGACGGAAATCAGGGCAGCAGCGCCGA TCGACGCTCGATCGATCAGG
Downstream 100 bases:
>100_bases GCCGACGCGGCGGCCCAGCTCTTAGCCCGTACGCCTGGACGAAAGCGATGGCGGAGAGGGAGGGATTCGAACCCCCGATA GGCTTGCACCTATGCCGCAT
Product: GCN5-related N-acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MGVEKPSMDAIETERLALRDFRSEDAADLFAYLHQPTASCFLSLSLADMGAAAAEANARSQSDEHIAVCFKDTGRLIGDL FAVQEDDTFSVGWNFNADFRGAGLASEAARALFGHLFTVRQARRLYAYVEDHNIASQRLCKRLGMRQEGLFKEYVTFKAD SKGVPIYENTMQFAILRKEWEQQH
Sequences:
>Translated_184_residues MGVEKPSMDAIETERLALRDFRSEDAADLFAYLHQPTASCFLSLSLADMGAAAAEANARSQSDEHIAVCFKDTGRLIGDL FAVQEDDTFSVGWNFNADFRGAGLASEAARALFGHLFTVRQARRLYAYVEDHNIASQRLCKRLGMRQEGLFKEYVTFKAD SKGVPIYENTMQFAILRKEWEQQH >Mature_183_residues GVEKPSMDAIETERLALRDFRSEDAADLFAYLHQPTASCFLSLSLADMGAAAAEANARSQSDEHIAVCFKDTGRLIGDLF AVQEDDTFSVGWNFNADFRGAGLASEAARALFGHLFTVRQARRLYAYVEDHNIASQRLCKRLGMRQEGLFKEYVTFKADS KGVPIYENTMQFAILRKEWEQQH
Specific function: Unknown
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: NA
Molecular weight: Translated: 20710; Mature: 20579
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVEKPSMDAIETERLALRDFRSEDAADLFAYLHQPTASCFLSLSLADMGAAAAEANARS CCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHCCCCC QSDEHIAVCFKDTGRLIGDLFAVQEDDTFSVGWNFNADFRGAGLASEAARALFGHLFTVR CCCCEEEEEECHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH QARRLYAYVEDHNIASQRLCKRLGMRQEGLFKEYVTFKADSKGVPIYENTMQFAILRKEW HHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHEEECCCCCCCEEHHHHHHHHHHHHH EQQH HCCC >Mature Secondary Structure GVEKPSMDAIETERLALRDFRSEDAADLFAYLHQPTASCFLSLSLADMGAAAAEANARS CCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHCCCCC QSDEHIAVCFKDTGRLIGDLFAVQEDDTFSVGWNFNADFRGAGLASEAARALFGHLFTVR CCCCEEEEEECHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH QARRLYAYVEDHNIASQRLCKRLGMRQEGLFKEYVTFKADSKGVPIYENTMQFAILRKEW HHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHEEECCCCCCCEEHHHHHHHHHHHHH EQQH HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]