Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is yhjE [H]

Identifier: 86747369

GI number: 86747369

Start: 276777

End: 278084

Strand: Direct

Name: yhjE [H]

Synonym: RPB_0243

Alternate gene names: 86747369

Gene position: 276777-278084 (Clockwise)

Preceding gene: 86747361

Following gene: 86747370

Centisome position: 5.19

GC content: 65.44

Gene sequence:

>1308_bases
ATGACAGAAACCACGACGGCGGGACTTGGCTCTGATCCGGCGCACAAGCAGGCCAACCCCGGCGAGATTGCGATCGGCGT
CATCATCGGGCGCACCGCCGAATTCTTCGACTTCTTCGTCTACGCGATCGCCTCGGTGATCGTGTTTCCGCGGCTGGTGT
TTCCGTTCGCCAGCGAGCTGACCGGCACGCTGTATGCGTTCGCGATCTTCGCCGTCGCCTTCATTGCGCGGCCGCTCGGC
ACCGTGATCTTCATGGCGATCGACCGCCGCTATGGCAAAAGCGCCAAGCTGATCAGCGCGATGCTGCTGCTCGGCACCGC
CACGGTCGCGATCGCCTTCCTGCCCGGCTATTCCGAAATCGGCGCGGCCTCGATCTGGCTCTTGGCGCTGGCGCGTGCGG
CGCAGGGTCTCGCCTGGGGCGGCGCCTGGGATGGTATGGCATCGTTGCTGGCGCTCAACGCCCCCAAGGAGCAGCGCGGC
TGGTACGCGATGGTGCCGCAGCTTGGCGCGCCGCTCGGGTTGATCGTCGCGAGCGCGCTGTTCGCCTATTTCACCGGTCA
TTTGTCGTCGGAGGACTTCTTCGGCTGGGGCTGGCGCTATCCGTTCTTCGTCGCCTTCGCCATCAACGTCGTGGCGCTGT
TCGCGCGGCTGCGCATGGTGGTGACGCCGGAATATGCGTCGCTGTTCGAAAGCCGCGAATTGCAGCCCAGCCGCGTTCTC
GCAACGCTCGGGCACGACGGCCGCAACATCATCATCGGGGCGTTCGCACCGCTGGCGAGCTTCGCCCTGTTTCATATGGT
CACGGTGTTTCCGCTGTCCTGGGTGTTCCTGTTCACCCGTGAAAGCCCGGTGCGGTTCCTGATCATCGAGACCATCGGCG
CGATGTTCGGCGTCGCGGCGATCATCGCGTCGGGCATGCTCGCCGATCGCATCGGCCGCAAGCCGTTGCTGATGGGCTCG
GCGATCGCGATCGCGGTGTTCAGCGGCTTCGCCCCGCAGATGCTCGATGCCGGCCCGGTCGGCGAGACCGCCTATATGAT
CCTCGGCTTCATTCTGCTCGGATTGTCGTTCGGCCAGTCGTCCGGCGTGATCGCTTCCAGCTTCCGGACCGCCTATCGCT
ACACCGCCTCCGCGCTGACCGCCGACCTCGCCTGGCTGTTCGGCGCAGGCTTCGCCCCGCTGGTCGCCCTGCTGCTCGCC
ACCGATTTCGGCCTGATCTCGTCGGGCGCCTATCTGCTGTCCGGCGCGGTGGTGACCATTCTGGCGCTGTACATCAGCGG
GTTGCGGGAGTCGGAAGAATATCGTTAG

Upstream 100 bases:

>100_bases
ATGTTGCGGTGCGGGATCACCGCTCAAACAGGTGGCGGATCGAGACGCCATTGAGAGGCGATCGCATCAACCTCCTCAAT
CTTCACAACGGCAGCGTGCG

Downstream 100 bases:

>100_bases
CCGACACGTCGCAAGCCGGCAGCGTCTTCACAACGCAAAGCGGTCCGCGGCAACGCGGGCCGCTTTTGTTTTGACAAGGT
CCGCGTGCACGACGCGTTCC

Product: MFS permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 435; Mature: 434

Protein sequence:

>435_residues
MTETTTAGLGSDPAHKQANPGEIAIGVIIGRTAEFFDFFVYAIASVIVFPRLVFPFASELTGTLYAFAIFAVAFIARPLG
TVIFMAIDRRYGKSAKLISAMLLLGTATVAIAFLPGYSEIGAASIWLLALARAAQGLAWGGAWDGMASLLALNAPKEQRG
WYAMVPQLGAPLGLIVASALFAYFTGHLSSEDFFGWGWRYPFFVAFAINVVALFARLRMVVTPEYASLFESRELQPSRVL
ATLGHDGRNIIIGAFAPLASFALFHMVTVFPLSWVFLFTRESPVRFLIIETIGAMFGVAAIIASGMLADRIGRKPLLMGS
AIAIAVFSGFAPQMLDAGPVGETAYMILGFILLGLSFGQSSGVIASSFRTAYRYTASALTADLAWLFGAGFAPLVALLLA
TDFGLISSGAYLLSGAVVTILALYISGLRESEEYR

Sequences:

>Translated_435_residues
MTETTTAGLGSDPAHKQANPGEIAIGVIIGRTAEFFDFFVYAIASVIVFPRLVFPFASELTGTLYAFAIFAVAFIARPLG
TVIFMAIDRRYGKSAKLISAMLLLGTATVAIAFLPGYSEIGAASIWLLALARAAQGLAWGGAWDGMASLLALNAPKEQRG
WYAMVPQLGAPLGLIVASALFAYFTGHLSSEDFFGWGWRYPFFVAFAINVVALFARLRMVVTPEYASLFESRELQPSRVL
ATLGHDGRNIIIGAFAPLASFALFHMVTVFPLSWVFLFTRESPVRFLIIETIGAMFGVAAIIASGMLADRIGRKPLLMGS
AIAIAVFSGFAPQMLDAGPVGETAYMILGFILLGLSFGQSSGVIASSFRTAYRYTASALTADLAWLFGAGFAPLVALLLA
TDFGLISSGAYLLSGAVVTILALYISGLRESEEYR
>Mature_434_residues
TETTTAGLGSDPAHKQANPGEIAIGVIIGRTAEFFDFFVYAIASVIVFPRLVFPFASELTGTLYAFAIFAVAFIARPLGT
VIFMAIDRRYGKSAKLISAMLLLGTATVAIAFLPGYSEIGAASIWLLALARAAQGLAWGGAWDGMASLLALNAPKEQRGW
YAMVPQLGAPLGLIVASALFAYFTGHLSSEDFFGWGWRYPFFVAFAINVVALFARLRMVVTPEYASLFESRELQPSRVLA
TLGHDGRNIIIGAFAPLASFALFHMVTVFPLSWVFLFTRESPVRFLIIETIGAMFGVAAIIASGMLADRIGRKPLLMGSA
IAIAVFSGFAPQMLDAGPVGETAYMILGFILLGLSFGQSSGVIASSFRTAYRYTASALTADLAWLFGAGFAPLVALLLAT
DFGLISSGAYLLSGAVVTILALYISGLRESEEYR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]

Homologues:

Organism=Escherichia coli, GI1789941, Length=434, Percent_Identity=34.1013824884793, Blast_Score=200, Evalue=2e-52,
Organism=Escherichia coli, GI1788292, Length=407, Percent_Identity=30.7125307125307, Blast_Score=147, Evalue=1e-36,
Organism=Escherichia coli, GI1790550, Length=414, Percent_Identity=26.3285024154589, Blast_Score=125, Evalue=5e-30,
Organism=Escherichia coli, GI1788942, Length=316, Percent_Identity=27.2151898734177, Blast_Score=89, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004736
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005828
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1; PF00083 Sugar_tr [H]

EC number: NA

Molecular weight: Translated: 46443; Mature: 46312

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETTTAGLGSDPAHKQANPGEIAIGVIIGRTAEFFDFFVYAIASVIVFPRLVFPFASEL
CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGTLYAFAIFAVAFIARPLGTVIFMAIDRRYGKSAKLISAMLLLGTATVAIAFLPGYSEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH
GAASIWLLALARAAQGLAWGGAWDGMASLLALNAPKEQRGWYAMVPQLGAPLGLIVASAL
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHCCCEEECHHHCCCHHHHHHHHH
FAYFTGHLSSEDFFGWGWRYPFFVAFAINVVALFARLRMVVTPEYASLFESRELQPSRVL
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHH
ATLGHDGRNIIIGAFAPLASFALFHMVTVFPLSWVFLFTRESPVRFLIIETIGAMFGVAA
HHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHH
IIASGMLADRIGRKPLLMGSAIAIAVFSGFAPQMLDAGPVGETAYMILGFILLGLSFGQS
HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
SGVIASSFRTAYRYTASALTADLAWLFGAGFAPLVALLLATDFGLISSGAYLLSGAVVTI
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHCCHHHHHHHHHHH
LALYISGLRESEEYR
HHHHHHHHCCCCCCC
>Mature Secondary Structure 
TETTTAGLGSDPAHKQANPGEIAIGVIIGRTAEFFDFFVYAIASVIVFPRLVFPFASEL
CCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGTLYAFAIFAVAFIARPLGTVIFMAIDRRYGKSAKLISAMLLLGTATVAIAFLPGYSEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH
GAASIWLLALARAAQGLAWGGAWDGMASLLALNAPKEQRGWYAMVPQLGAPLGLIVASAL
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHCCCEEECHHHCCCHHHHHHHHH
FAYFTGHLSSEDFFGWGWRYPFFVAFAINVVALFARLRMVVTPEYASLFESRELQPSRVL
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHH
ATLGHDGRNIIIGAFAPLASFALFHMVTVFPLSWVFLFTRESPVRFLIIETIGAMFGVAA
HHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHH
IIASGMLADRIGRKPLLMGSAIAIAVFSGFAPQMLDAGPVGETAYMILGFILLGLSFGQS
HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
SGVIASSFRTAYRYTASALTADLAWLFGAGFAPLVALLLATDFGLISSGAYLLSGAVVTI
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHCCHHHHHHHHHHH
LALYISGLRESEEYR
HHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]