| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is fixG [H]
Identifier: 86747140
GI number: 86747140
Start: 13407
End: 14954
Strand: Reverse
Name: fixG [H]
Synonym: RPB_0013
Alternate gene names: 86747140
Gene position: 14954-13407 (Counterclockwise)
Preceding gene: 86747141
Following gene: 86747139
Centisome position: 0.28
GC content: 65.5
Gene sequence:
>1548_bases GTGTTGGGGGGCACGCGAGGGTCGACAGACGCGCCGGCCGCGGAGTCGCGGCGCGGCGACGAAACCAAGAAGAACCCCGA GATGAACAAGCCCCTGCGCGACACCGACCTGGTCCCGGACGACGACGGAGGCCCGCTCTACGCCGCCGGGAAGAAGATCT ATCCGCAGCGCGTCTCGGGATCGTTCCGGCGCATCAAATGGATCCTGATGGCGGTGTGCCTCGGGATCTACTACTTCCTG CCCTTCGTGCGCTGGAATCGCGGCCTCGGCGCACCCGACCAGGCGGTGCTGATCGATCTCGCCAACAACCGTTTCTATTT CTTCTTCATCGAGTTGTGGCCGCAGGAGATCTATTACTTCACCGGCCTTTTGATCGTCGCCGCGATCACGCTGTTTCTGA TGAACGCGCTCGGCGGCCGGGTGTGGTGCGGCTATCTCTGCCCGCAGACGGTGTGGACCGACCTGTTCTTCGCGGTCGAG CGGCTGGTCGAGGGCGATCGCCGCGAGCGGATGCGCAAGGCCGAGGAGGGTTGGTCGCTGCAGCGCGGCTCCGAGTTGGT GCTGAAGCATTCGATCTGGCTGATGATCGCGTGGTGGACCGGCGGCGCCTGGGTGCTGTATTTCGCCGACGCGCCGACGC TGATCAAGGACCTGGTCACCTTCCAGGCGCCGATGGTCGCCTATATCTGGATCGGCATCCTCACCTTCACCACCTACACG CTCGCCGGCTTCATGCGCGAGCAGGTCTGTGTCTACATGTGCCCGTGGCCGCGGATCCAGGCGGCGCTGACCGACGAATG GGCGCTCAACGTCACCTATAAGTACGATCGCGGCGAGCAGCGCACCTCGCTGAAGAAGGCCGCGCAGGCGCGCGCGCTGG GCGAACAGGTCGGCGACTGCGTCGATTGCAACCAGTGCGTCGCGGTGTGCCCGACCGGCATCGACATTCGCAACGGGCCT CAGCTCGACTGCATCCAGTGCGGCCTGTGCATCGACGCCTGCGACAACGTCATGACCAAGATCGGCCGCCCGACGCGGTT GATCGGCTACGACAACGACATCAACATCCATCGCCGGATGGAGGGCAAGCCGGAGATCTTCAAGCCGCTGCGTGCCCGCA CCGTGGTGTATTCGGCGCTGATCGCCGGCATCGGCGCGATCATGCTGTATGCGCTGCTGAACCGCAGCCTGCTCGACCTC AACGTGCTGCACGACCGCAACCCGGTCGCGGTGCGGCTCAGCGACGGCTCGATCCGCAACGGCTACACCATCCGCTTCCT CAACAAGCGCGGCTTCGACCGCGTGATCGCGGTCGACGTCAGCGGGCCGCCGAATGCGGTGATCCACATCGTCGGCGCGG ATTCGATCGTGCCGGACCGGCCGATGATCATCCTGGCCCGCGACGCCACCACCGAACTGCGCGTGCTGGTCGATTCCCGC CCGTCGTCCGAGGAAGACCTCGCACCGTCCACGCCGGTGGCGTTCCACGTCACCGATATCGGCCTCGGCGAAGTCGCATC CGCCAAGGACGTCTTCGTCAAGCCCTGA
Upstream 100 bases:
>100_bases AACGAGCGTCTCGATCCGGCCACCATCAAGGCGATGGCGGTGTACGTGCACTCGCTCGGCGGCGGCAAATAGCCGCCGGC CGCCGGACGGGATCCTCGAC
Downstream 100 bases:
>100_bases CCGCCACCGGAGCCGTTCCATGACTCGTCCAACCTCCAAACCCAGGCAACTCACCGGCAAGGTCGTGTTCGTGTCGCTGG TCGCCTTCTTCGGCGTGGTG
Product: 4Fe-4S ferredoxin, iron-sulfur binding
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 515; Mature: 515
Protein sequence:
>515_residues MLGGTRGSTDAPAAESRRGDETKKNPEMNKPLRDTDLVPDDDGGPLYAAGKKIYPQRVSGSFRRIKWILMAVCLGIYYFL PFVRWNRGLGAPDQAVLIDLANNRFYFFFIELWPQEIYYFTGLLIVAAITLFLMNALGGRVWCGYLCPQTVWTDLFFAVE RLVEGDRRERMRKAEEGWSLQRGSELVLKHSIWLMIAWWTGGAWVLYFADAPTLIKDLVTFQAPMVAYIWIGILTFTTYT LAGFMREQVCVYMCPWPRIQAALTDEWALNVTYKYDRGEQRTSLKKAAQARALGEQVGDCVDCNQCVAVCPTGIDIRNGP QLDCIQCGLCIDACDNVMTKIGRPTRLIGYDNDINIHRRMEGKPEIFKPLRARTVVYSALIAGIGAIMLYALLNRSLLDL NVLHDRNPVAVRLSDGSIRNGYTIRFLNKRGFDRVIAVDVSGPPNAVIHIVGADSIVPDRPMIILARDATTELRVLVDSR PSSEEDLAPSTPVAFHVTDIGLGEVASAKDVFVKP
Sequences:
>Translated_515_residues MLGGTRGSTDAPAAESRRGDETKKNPEMNKPLRDTDLVPDDDGGPLYAAGKKIYPQRVSGSFRRIKWILMAVCLGIYYFL PFVRWNRGLGAPDQAVLIDLANNRFYFFFIELWPQEIYYFTGLLIVAAITLFLMNALGGRVWCGYLCPQTVWTDLFFAVE RLVEGDRRERMRKAEEGWSLQRGSELVLKHSIWLMIAWWTGGAWVLYFADAPTLIKDLVTFQAPMVAYIWIGILTFTTYT LAGFMREQVCVYMCPWPRIQAALTDEWALNVTYKYDRGEQRTSLKKAAQARALGEQVGDCVDCNQCVAVCPTGIDIRNGP QLDCIQCGLCIDACDNVMTKIGRPTRLIGYDNDINIHRRMEGKPEIFKPLRARTVVYSALIAGIGAIMLYALLNRSLLDL NVLHDRNPVAVRLSDGSIRNGYTIRFLNKRGFDRVIAVDVSGPPNAVIHIVGADSIVPDRPMIILARDATTELRVLVDSR PSSEEDLAPSTPVAFHVTDIGLGEVASAKDVFVKP >Mature_515_residues MLGGTRGSTDAPAAESRRGDETKKNPEMNKPLRDTDLVPDDDGGPLYAAGKKIYPQRVSGSFRRIKWILMAVCLGIYYFL PFVRWNRGLGAPDQAVLIDLANNRFYFFFIELWPQEIYYFTGLLIVAAITLFLMNALGGRVWCGYLCPQTVWTDLFFAVE RLVEGDRRERMRKAEEGWSLQRGSELVLKHSIWLMIAWWTGGAWVLYFADAPTLIKDLVTFQAPMVAYIWIGILTFTTYT LAGFMREQVCVYMCPWPRIQAALTDEWALNVTYKYDRGEQRTSLKKAAQARALGEQVGDCVDCNQCVAVCPTGIDIRNGP QLDCIQCGLCIDACDNVMTKIGRPTRLIGYDNDINIHRRMEGKPEIFKPLRARTVVYSALIAGIGAIMLYALLNRSLLDL NVLHDRNPVAVRLSDGSIRNGYTIRFLNKRGFDRVIAVDVSGPPNAVIHIVGADSIVPDRPMIILARDATTELRVLVDSR PSSEEDLAPSTPVAFHVTDIGLGEVASAKDVFVKP
Specific function: FixG is predicted to be involved in a redox process. The four proteins fixG, fixH, fixI, and fixS may participate in a membrane-bound complex coupling the fixI cation pump with a redox process catalyzed by fixG [H]
COG id: COG0348
COG function: function code C; Polyferredoxin
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR014116 - InterPro: IPR012285 - InterPro: IPR013783 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57702; Mature: 57702
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGGTRGSTDAPAAESRRGDETKKNPEMNKPLRDTDLVPDDDGGPLYAAGKKIYPQRVSG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHCC SFRRIKWILMAVCLGIYYFLPFVRWNRGLGAPDQAVLIDLANNRFYFFFIELWPQEIYYF HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCEEEEEEEEECHHHHHHH TGLLIVAAITLFLMNALGGRVWCGYLCPQTVWTDLFFAVERLVEGDRRERMRKAEEGWSL HHHHHHHHHHHHHHHHCCCCEEEHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC QRGSELVLKHSIWLMIAWWTGGAWVLYFADAPTLIKDLVTFQAPMVAYIWIGILTFTTYT CCCCCEEEEEEEEEEEEEECCCEEEEEECCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHH LAGFMREQVCVYMCPWPRIQAALTDEWALNVTYKYDRGEQRTSLKKAAQARALGEQVGDC HHHHHHHCEEEEECCCCCHHHEECCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCC VDCNQCVAVCPTGIDIRNGPQLDCIQCGLCIDACDNVMTKIGRPTRLIGYDNDINIHRRM CCCCCHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEC EGKPEIFKPLRARTVVYSALIAGIGAIMLYALLNRSLLDLNVLHDRNPVAVRLSDGSIRN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCCCCC GYTIRFLNKRGFDRVIAVDVSGPPNAVIHIVGADSIVPDRPMIILARDATTELRVLVDSR CEEEEEECCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEECCCCEEEEEEECC PSSEEDLAPSTPVAFHVTDIGLGEVASAKDVFVKP CCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEECC >Mature Secondary Structure MLGGTRGSTDAPAAESRRGDETKKNPEMNKPLRDTDLVPDDDGGPLYAAGKKIYPQRVSG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHCC SFRRIKWILMAVCLGIYYFLPFVRWNRGLGAPDQAVLIDLANNRFYFFFIELWPQEIYYF HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCEEEEEEEEECHHHHHHH TGLLIVAAITLFLMNALGGRVWCGYLCPQTVWTDLFFAVERLVEGDRRERMRKAEEGWSL HHHHHHHHHHHHHHHHCCCCEEEHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC QRGSELVLKHSIWLMIAWWTGGAWVLYFADAPTLIKDLVTFQAPMVAYIWIGILTFTTYT CCCCCEEEEEEEEEEEEEECCCEEEEEECCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHH LAGFMREQVCVYMCPWPRIQAALTDEWALNVTYKYDRGEQRTSLKKAAQARALGEQVGDC HHHHHHHCEEEEECCCCCHHHEECCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCC VDCNQCVAVCPTGIDIRNGPQLDCIQCGLCIDACDNVMTKIGRPTRLIGYDNDINIHRRM CCCCCHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEC EGKPEIFKPLRARTVVYSALIAGIGAIMLYALLNRSLLDLNVLHDRNPVAVRLSDGSIRN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCCCCC GYTIRFLNKRGFDRVIAVDVSGPPNAVIHIVGADSIVPDRPMIILARDATTELRVLVDSR CEEEEEECCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEECCCCEEEEEEECC PSSEEDLAPSTPVAFHVTDIGLGEVASAKDVFVKP CCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2536685; 11481432 [H]