| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86747139
Identifier: 86747139
GI number: 86747139
Start: 12887
End: 13387
Strand: Reverse
Name: 86747139
Synonym: RPB_0012
Alternate gene names: NA
Gene position: 13387-12887 (Counterclockwise)
Preceding gene: 86747140
Following gene: 86747138
Centisome position: 0.25
GC content: 68.26
Gene sequence:
>501_bases ATGACTCGTCCAACCTCCAAACCCAGGCAACTCACCGGCAAGGTCGTGTTCGTGTCGCTGGTCGCCTTCTTCGGCGTGGT GTTCGGCGTCAACGGGCTGATGATGGCGCTGGCGATCAAGACGCTGCCGGGTACCGAGGTCGACAGCGCCTATGCGGCGA GCCTCGCTTACGAAAGCGAGATCGCCGCGGCGCGCGATCAGGAGAAACGCGGCTGGAAGGTCGACGCCCGGGTCGAACGC CGGCCCGACGGCCGCGCGACGCTGCGGGTCGAGGCGCGCGACCGCGCCGGACTGCCGCTGTCGGGGCTGACATTCTTCGG CCGCCTCGAGCGACCGGCCGACAAGGCGGGGGACCACGATGTGGTGCTCGCCGAGACCGCGAGCGGCGTGTTTCAGGGCG ATGCCACGGGGGTCGCACCGGGGCGCTGGGATCTGGTGCTGGAGGGCGATCAGAACGGCAACCGCATGTTCTTGTCGAAG AACCGCCTGACGCTGAACTGA
Upstream 100 bases:
>100_bases TCCACGCCGGTGGCGTTCCACGTCACCGATATCGGCCTCGGCGAAGTCGCATCCGCCAAGGACGTCTTCGTCAAGCCCTG ACCGCCACCGGAGCCGTTCC
Downstream 100 bases:
>100_bases CGAGCGATCCGGACGAGGATCAAAAGGCGCGCCGCATGTTGATGACCCGGGACTTCTCGCACTACGTCAAGGACGTCGAT CCGCAGACCGCGCATCTCGA
Product: FixH
Products: NA
Alternate protein names: FixH Protein; Nitrogen Fixation Protein FixH; FixH Superfamily
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MTRPTSKPRQLTGKVVFVSLVAFFGVVFGVNGLMMALAIKTLPGTEVDSAYAASLAYESEIAAARDQEKRGWKVDARVER RPDGRATLRVEARDRAGLPLSGLTFFGRLERPADKAGDHDVVLAETASGVFQGDATGVAPGRWDLVLEGDQNGNRMFLSK NRLTLN
Sequences:
>Translated_166_residues MTRPTSKPRQLTGKVVFVSLVAFFGVVFGVNGLMMALAIKTLPGTEVDSAYAASLAYESEIAAARDQEKRGWKVDARVER RPDGRATLRVEARDRAGLPLSGLTFFGRLERPADKAGDHDVVLAETASGVFQGDATGVAPGRWDLVLEGDQNGNRMFLSK NRLTLN >Mature_165_residues TRPTSKPRQLTGKVVFVSLVAFFGVVFGVNGLMMALAIKTLPGTEVDSAYAASLAYESEIAAARDQEKRGWKVDARVERR PDGRATLRVEARDRAGLPLSGLTFFGRLERPADKAGDHDVVLAETASGVFQGDATGVAPGRWDLVLEGDQNGNRMFLSKN RLTLN
Specific function: Unknown
COG id: COG5456
COG function: function code P; Predicted integral membrane protein linked to a cation pump
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17979; Mature: 17848
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPTSKPRQLTGKVVFVSLVAFFGVVFGVNGLMMALAIKTLPGTEVDSAYAASLAYESE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH IAAARDQEKRGWKVDARVERRPDGRATLRVEARDRAGLPLSGLTFFGRLERPADKAGDHD HHHHCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCC VVLAETASGVFQGDATGVAPGRWDLVLEGDQNGNRMFLSKNRLTLN EEEEECCCCEECCCCCCCCCCCEEEEEECCCCCCEEEEECCCEEEC >Mature Secondary Structure TRPTSKPRQLTGKVVFVSLVAFFGVVFGVNGLMMALAIKTLPGTEVDSAYAASLAYESE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH IAAARDQEKRGWKVDARVERRPDGRATLRVEARDRAGLPLSGLTFFGRLERPADKAGDHD HHHHCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCC VVLAETASGVFQGDATGVAPGRWDLVLEGDQNGNRMFLSKNRLTLN EEEEECCCCEECCCCCCCCCCCEEEEEECCCCCCEEEEECCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA