Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 90296803

Identifier: 90296803

GI number: 90296803

Start: 2505025

End: 2505474

Strand: Direct

Name: 90296803

Synonym: CYB_2406

Alternate gene names: NA

Gene position: 2505025-2505474 (Clockwise)

Preceding gene: 86609843

Following gene: 86609844

Centisome position: 82.22

GC content: 56.67

Gene sequence:

>450_bases
ATGGCCTATGACAACGTCTGCAAATATCTGGCCGAGCGTTTCCCAGAGCAGTTTGCCCGCTGGCTCATGGGAGAAGTGGC
TCGGCTCCGACTCTATCGGAGGTATCCTCACCTATCGGTGCAGCAGGTGGTCAAGGTGCTCCGCACCGCTAACGCGATTG
ACTTGCGCAAAACGGGGTCGGAGGGAGTTTTCCAGACCTCTTTTCGTCTAGAGAGGCTGAGCCATGAGTTCGATGTTGTC
CGCCTGTGGGAATGCGATTTGAGGGCCGGAGCGGATCGGCAAGCCCTGCTACCGTTTCGGGTTCTAAGCCAGGTGGAAGA
TCCAGCAGAAACCTTGCGAGAGGTGGTCAGTGAGCTAGAGAGCTTGGCAGACCCCAGTGAGAGAAGGGAATTGGCAGCCG
CAACAGCCGTCTTGGCGGGACTAGGTCGTGTTGATCTTATGTTAGGATAG

Upstream 100 bases:

>100_bases
GCTCCGTCAGCGGCAGCATTTATGTGACGGTGGGGCAGCCTCACATCAAGGTAGATTCCATTACCGTGGGCGGTCGCTAA
TTCCAGGGATCCACCTCGAC

Downstream 100 bases:

>100_bases
AGGGAATAATTTATAGAGGAAAGAGGATGAAGTTGGTTTTTTTAGATGAAAACAAATGGCAGAAGATATTGGCTTTTTTA
CAGACAGAAGAGAGAGTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MAYDNVCKYLAERFPEQFARWLMGEVARLRLYRRYPHLSVQQVVKVLRTANAIDLRKTGSEGVFQTSFRLERLSHEFDVV
RLWECDLRAGADRQALLPFRVLSQVEDPAETLREVVSELESLADPSERRELAAATAVLAGLGRVDLMLG

Sequences:

>Translated_149_residues
MAYDNVCKYLAERFPEQFARWLMGEVARLRLYRRYPHLSVQQVVKVLRTANAIDLRKTGSEGVFQTSFRLERLSHEFDVV
RLWECDLRAGADRQALLPFRVLSQVEDPAETLREVVSELESLADPSERRELAAATAVLAGLGRVDLMLG
>Mature_148_residues
AYDNVCKYLAERFPEQFARWLMGEVARLRLYRRYPHLSVQQVVKVLRTANAIDLRKTGSEGVFQTSFRLERLSHEFDVVR
LWECDLRAGADRQALLPFRVLSQVEDPAETLREVVSELESLADPSERRELAAATAVLAGLGRVDLMLG

Specific function: Unknown

COG id: COG5464

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17036; Mature: 16905

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYDNVCKYLAERFPEQFARWLMGEVARLRLYRRYPHLSVQQVVKVLRTANAIDLRKTGS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHCCCC
EGVFQTSFRLERLSHEFDVVRLWECDLRAGADRQALLPFRVLSQVEDPAETLREVVSELE
CCHHHHHHHHHHHHHHHCCHHEEECHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
SLADPSERRELAAATAVLAGLGRVDLMLG
HHCCHHHHHHHHHHHHHHHHCCHHHHCCC
>Mature Secondary Structure 
AYDNVCKYLAERFPEQFARWLMGEVARLRLYRRYPHLSVQQVVKVLRTANAIDLRKTGS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHCCCC
EGVFQTSFRLERLSHEFDVVRLWECDLRAGADRQALLPFRVLSQVEDPAETLREVVSELE
CCHHHHHHHHHHHHHHHCCHHEEECHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
SLADPSERRELAAATAVLAGLGRVDLMLG
HHCCHHHHHHHHHHHHHHHHCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA