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The map label for this gene is tldD [C]

Identifier: 86609843

GI number: 86609843

Start: 2503544

End: 2505004

Strand: Direct

Name: tldD [C]

Synonym: CYB_2405

Alternate gene names: 86609843

Gene position: 2503544-2505004 (Clockwise)

Preceding gene: 86609841

Following gene: 90296803

Centisome position: 82.17

GC content: 58.66

Gene sequence:

>1461_bases
ATGCTGCTTTTGTCCAAAGAACTGCCCAACCTGAACTACCGTCATACTCTACAGCGCTTCGACGAGGATTGGCGGGATCC
CCTCTCTGCCCTGTTGGGTTGGGGTCGGGCTGCCGGTGCCGATTTGGTGGAGATTTTTCTAGAACGGGGCAATTCCATCA
GTTGCCTGGCCGAAGATGACGCCATCACCAGCATCACCCCACGGCTCTCCACCGGGGCCGGCGTGCGGGTGTTTCGCGGC
TTGGCCGACTGCTACGTCAGCACCAACGATCTGTCCTTTGCCGGTCTCAAGGCTGCTCTGGAGAAGGGCCTTTCGCTGAT
GGGCCTCACCCCTCCCGGCCCCACAGCGCTGGTTTCTGCCATCAACCTGGAGATGCTGCAGGACTACGGCGAGCGTCGCC
GCAAAGATGGCTGGTTGAAGGAATGTAGCCCCATTGCGGAGATGGGGGAGATCCTGCTCAAAGCCAACGAGCAACTGGGT
CGCCAAGCCCGCCATGTGCAGTCCCGCCGCACCACCTATTTCCGCGATTGGCAAGAGATTCTGGTGGCCTGCAGCGATGG
CACCTTTGTGCGGGATGTGCGCCTCACCCAATCCGTGAGCTCTACGCTGCTCTGTGCCGATGGATCCCATCGCGCCTCTG
TCAGTCAACGCTCCGGCGGTACGGGGGATCCCAACTTTTTGCGCCGTTGGGATCTGGAGGCCCACAGCCGGGAGCTGGCA
GAAGCTGCCGGCCAGATGCTCTATGCCGACTATGTGGAATCCGGCACCTACCCGATTGTGATGTCCAACGCCTTTGGCGG
CGTCATTTTCCACGAAGCCTGCGGGCATCTGTTGGAAACCACCCAGATTGAGCGCAAAACCACTCCCTTTGCCGACAAAA
AAGGCCAGAAAATTGCCCACAAAAACCTCACCGCCTGGGATGAAGGTCTCTCTGAAGGGGCCTTTGGCAGCCTGGATGTG
GATGACGAGGGGATGCCCGTCCAGCGCACTCTGCTGATCGAGAAGGGCATTTTGAAAAACTTCTTGGCGGATCGGGCTGG
CTCAATGCGCACCGGCCACCCTCGCACCGGCAGCGGTCGCCGACAGAACTACACCTTTGCCCCCGCCAGCCGTATGCGCA
ATACCTACATTGCCCCCGGAGATGCAGAACTGGACGATCTTTTTGCTTCTATCGACAAAGGCATTTACTGCAAGCGTATG
GGGGGAGGGAGCGTCGGCCCCACTGGGCAATTTAACTTCGCCGTCGAAGAAGCCTATCTCATCGAAAACGGCAAGATTAC
CAAACCCCTCAAGGGAGCCACCCTGATCGGAGAAGCCAAAGACATCTTGACCAAAATCTCCATGTGTTCCAAAGACCTCA
GCTTGGCAGCTGGGTTCTGTGGCTCCGTCAGCGGCAGCATTTATGTGACGGTGGGGCAGCCTCACATCAAGGTAGATTCC
ATTACCGTGGGCGGTCGCTAA

Upstream 100 bases:

>100_bases
AAGGCCAACCTGCCGGCAGGGGAGAACCTTTACTCCTTGTTAAACTGAGAAAACGAAAACTTGCGCCGGCCTTAGCTCGT
CTCTACTCCCTGAGCCTGCC

Downstream 100 bases:

>100_bases
TTCCAGGGATCCACCTCGACATGGCCTATGACAACGTCTGCAAATATCTGGCCGAGCGTTTCCCAGAGCAGTTTGCCCGC
TGGCTCATGGGAGAAGTGGC

Product: U62 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 486; Mature: 486

Protein sequence:

>486_residues
MLLLSKELPNLNYRHTLQRFDEDWRDPLSALLGWGRAAGADLVEIFLERGNSISCLAEDDAITSITPRLSTGAGVRVFRG
LADCYVSTNDLSFAGLKAALEKGLSLMGLTPPGPTALVSAINLEMLQDYGERRRKDGWLKECSPIAEMGEILLKANEQLG
RQARHVQSRRTTYFRDWQEILVACSDGTFVRDVRLTQSVSSTLLCADGSHRASVSQRSGGTGDPNFLRRWDLEAHSRELA
EAAGQMLYADYVESGTYPIVMSNAFGGVIFHEACGHLLETTQIERKTTPFADKKGQKIAHKNLTAWDEGLSEGAFGSLDV
DDEGMPVQRTLLIEKGILKNFLADRAGSMRTGHPRTGSGRRQNYTFAPASRMRNTYIAPGDAELDDLFASIDKGIYCKRM
GGGSVGPTGQFNFAVEEAYLIENGKITKPLKGATLIGEAKDILTKISMCSKDLSLAAGFCGSVSGSIYVTVGQPHIKVDS
ITVGGR

Sequences:

>Translated_486_residues
MLLLSKELPNLNYRHTLQRFDEDWRDPLSALLGWGRAAGADLVEIFLERGNSISCLAEDDAITSITPRLSTGAGVRVFRG
LADCYVSTNDLSFAGLKAALEKGLSLMGLTPPGPTALVSAINLEMLQDYGERRRKDGWLKECSPIAEMGEILLKANEQLG
RQARHVQSRRTTYFRDWQEILVACSDGTFVRDVRLTQSVSSTLLCADGSHRASVSQRSGGTGDPNFLRRWDLEAHSRELA
EAAGQMLYADYVESGTYPIVMSNAFGGVIFHEACGHLLETTQIERKTTPFADKKGQKIAHKNLTAWDEGLSEGAFGSLDV
DDEGMPVQRTLLIEKGILKNFLADRAGSMRTGHPRTGSGRRQNYTFAPASRMRNTYIAPGDAELDDLFASIDKGIYCKRM
GGGSVGPTGQFNFAVEEAYLIENGKITKPLKGATLIGEAKDILTKISMCSKDLSLAAGFCGSVSGSIYVTVGQPHIKVDS
ITVGGR
>Mature_486_residues
MLLLSKELPNLNYRHTLQRFDEDWRDPLSALLGWGRAAGADLVEIFLERGNSISCLAEDDAITSITPRLSTGAGVRVFRG
LADCYVSTNDLSFAGLKAALEKGLSLMGLTPPGPTALVSAINLEMLQDYGERRRKDGWLKECSPIAEMGEILLKANEQLG
RQARHVQSRRTTYFRDWQEILVACSDGTFVRDVRLTQSVSSTLLCADGSHRASVSQRSGGTGDPNFLRRWDLEAHSRELA
EAAGQMLYADYVESGTYPIVMSNAFGGVIFHEACGHLLETTQIERKTTPFADKKGQKIAHKNLTAWDEGLSEGAFGSLDV
DDEGMPVQRTLLIEKGILKNFLADRAGSMRTGHPRTGSGRRQNYTFAPASRMRNTYIAPGDAELDDLFASIDKGIYCKRM
GGGSVGPTGQFNFAVEEAYLIENGKITKPLKGATLIGEAKDILTKISMCSKDLSLAAGFCGSVSGSIYVTVGQPHIKVDS
ITVGGR

Specific function: Suppresses The Inhibitory Activity Of The Carbon Storage Regulator (Csra). [C]

COG id: COG0312

COG function: function code R; Predicted Zn-dependent proteases and their inactivated homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U62 family [H]

Homologues:

Organism=Escherichia coli, GI1789640, Length=474, Percent_Identity=33.3333333333333, Blast_Score=221, Evalue=1e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002510 [H]

Pfam domain/function: PF01523 PmbA_TldD [H]

EC number: NA

Molecular weight: Translated: 52914; Mature: 52914

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLLSKELPNLNYRHTLQRFDEDWRDPLSALLGWGRAAGADLVEIFLERGNSISCLAEDD
CEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEECCC
AITSITPRLSTGAGVRVFRGLADCYVSTNDLSFAGLKAALEKGLSLMGLTPPGPTALVSA
CCEECCCCCCCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHCCCEEEECCCCCHHHHHHH
INLEMLQDYGERRRKDGWLKECSPIAEMGEILLKANEQLGRQARHVQSRRTTYFRDWQEI
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVACSDGTFVRDVRLTQSVSSTLLCADGSHRASVSQRSGGTGDPNFLRRWDLEAHSRELA
HEECCCCCEEEHHHHHHHHCCEEEECCCCCCCCCHHCCCCCCCHHHHHCCCCHHHHHHHH
EAAGQMLYADYVESGTYPIVMSNAFGGVIFHEACGHLLETTQIERKTTPFADKKGQKIAH
HHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
KNLTAWDEGLSEGAFGSLDVDDEGMPVQRTLLIEKGILKNFLADRAGSMRTGHPRTGSGR
CCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
RQNYTFAPASRMRNTYIAPGDAELDDLFASIDKGIYCKRMGGGSVGPTGQFNFAVEEAYL
CCCCEECCHHHCCCCEECCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEEEEEE
IENGKITKPLKGATLIGEAKDILTKISMCSKDLSLAAGFCGSVSGSIYVTVGQPHIKVDS
EECCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEE
ITVGGR
EECCCC
>Mature Secondary Structure
MLLLSKELPNLNYRHTLQRFDEDWRDPLSALLGWGRAAGADLVEIFLERGNSISCLAEDD
CEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEECCC
AITSITPRLSTGAGVRVFRGLADCYVSTNDLSFAGLKAALEKGLSLMGLTPPGPTALVSA
CCEECCCCCCCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHCCCEEEECCCCCHHHHHHH
INLEMLQDYGERRRKDGWLKECSPIAEMGEILLKANEQLGRQARHVQSRRTTYFRDWQEI
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVACSDGTFVRDVRLTQSVSSTLLCADGSHRASVSQRSGGTGDPNFLRRWDLEAHSRELA
HEECCCCCEEEHHHHHHHHCCEEEECCCCCCCCCHHCCCCCCCHHHHHCCCCHHHHHHHH
EAAGQMLYADYVESGTYPIVMSNAFGGVIFHEACGHLLETTQIERKTTPFADKKGQKIAH
HHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
KNLTAWDEGLSEGAFGSLDVDDEGMPVQRTLLIEKGILKNFLADRAGSMRTGHPRTGSGR
CCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
RQNYTFAPASRMRNTYIAPGDAELDDLFASIDKGIYCKRMGGGSVGPTGQFNFAVEEAYL
CCCCEECCHHHCCCCEECCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEEEEEE
IENGKITKPLKGATLIGEAKDILTKISMCSKDLSLAAGFCGSVSGSIYVTVGQPHIKVDS
EECCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEE
ITVGGR
EECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]