Click here to switch to the map view.

The map label for this gene is cca [H]

Identifier: 86610318

GI number: 86610318

Start: 2995885

End: 2998611

Strand: Direct

Name: cca [H]

Synonym: CYB_2898

Alternate gene names: 86610318

Gene position: 2995885-2998611 (Clockwise)

Preceding gene: 86610317

Following gene: 86610322

Centisome position: 98.33

GC content: 63.4

Gene sequence:

>2727_bases
ATGGATCTGATCCTGTGCCATCAATCGGCGGATTTCGACACCCTAGGGGCGGCGGTGGGAGCGGCGCGCCTGTATCCGGG
TGCCCGCATTGCCTTGGCCGGGGGATCCCTGCCGGGGGTGCAGGAGTTTTTGGCCTTGTACCGAGATGAATTTCCCCTCA
TCGAGCTGCGCTCTGTGGATCCGGGACAGGTGCAGCGGTGGATTGTGGTGGACTGTCACGATCCGGATCGCTTGGGCAAA
GCTGCCGCTTGGTTGAGCGTCCCCGGCACCCAAATCGAGATTTTCGACCATCACCTCAGGGATCCGGAAACCCCACCGGA
TGGCTTTTGGCCGCAGCAGCAGGTGAACTGTCATATCGAGGCCGTGGGGGCCACCTGTACCTTGCTGGTGGAGCGGCTGC
AGGCTGCTGGGATCCCTCTCAGCCCTTTTGAGCGGCTGGCGCTGGCTTTGGGCATTCACATGGATACGGGATCCCTGACC
TTCCCGGAGACCACCGCCCGCGATGCTGCTGCCCTGAGCTGGCTGTTGGATCAGGGGGTGAACCTGGTCTTGTTGCGGCG
CTTTTTGGGGGATGGCCTCACCCCAGAGATGCGCGAACTGCTCAGCCAGGGGCTGGCCCAGATGCAGGTGCAGCAGGTGG
GAGAGTATCGCCTGGGAGAGTGGCTGCTGGAGCTGCCGGAGTTTGTGCCCGGCCTAGCCGGCCTGGTGATGCGGCTGATG
GATCTGACGGGAGTGGATGTGCTGCTCTTGGTGGCGCGGCAGGGGGAGCGGCTCAGCCTGATCGGGCGGGCGCGGCAGGA
GTTTGCCCAGTTGGGCAGGGTGATGGCCCTCTACGGCGGCGGTGGACACGATTGTGCTGCAGCAGCCACGTTAAAAGCCA
GCCCAGAGCAGCCTTTGCCCAACCCGGCCCAAGTCATGGCGGCCCTCAGGCAGGCTGTCCAAGAGCGGATCCCGCCCCCG
GTGACGGCCAAAGATTTGATGTCGGCTCCGGTGCGCACCATCCGACCGGAGATCACCATCGACGAGGCCCAGCGGGTGCT
GCTGCGCTACGGCCATTCCGGCCTGGTGGTGGTGGACGCTCAAGGTCGCCTGGTGGGGGTGATCTCGCGGCGGGATATCG
ATATCGCCCTGCATCACGGGTTTGGCCATGCCCCCGTCAAGGGCTACATGACCACCGACGTGAAAACCCTCTCCCCCGAC
ACCCCCTTGGCGGAGATTCAGCGGTTGATGGTGCAGTGGGATATTGGCCGCCTGCCGGTTCTCCAGGATGGACAGTTGGT
GGGCATTGTAACTCGCACCGATGTGTTGCGGCACCTACACGAGTTGCCGGCCCTCTCACCGCAGTTGGCTTTGCCCACCC
TTTCCTGCCCTTTGGATCTCGCCTTCGCGGCCCTGTCGGAGCGGCATCGACAGTTGCTGGAGCAGGCCGCCCACATCGCC
GATGAGAAGGGCCTGAGGTTGTATCTGGTGGGGGGAACGGTGCGGGATCTGCTGCTGCACCGGTGGGGACGGCAGCCCTC
ACCCAACCTGGAGCGGCTGGATCTGGACTTGGTGGTGGATGGGCCCTACTCTCCGGCCCTGGATGGGATCGATCCCCCGG
GCTGGGGCTTGATTTTGGGACAAGCGCTCAAACAGCACTTCCCAGAAGCGCGGCTGGAGATCCACGGCAAATTCCAAACG
GCGGCCTTGATCTGGCCAGGCGGCTTTTGTGTGGATATCGCCAGCGCCCGCACGGAGTTTTATCCCTACCCGGCCTCTCC
CCCCGAAGTGGCCATGGGATCCATTCAGCAAGACCTCTATCGGCGGGATTTTTCCATCAACGCCTTGGCCTTGCGCCTCA
ACGGCCCCCAGCGAGGACAGGTGCTGGATTTTTTCGGCGGACAAGCGGATCTGCAACAGGGGATCATCCGGGCATTACAC
CCCAACAGCTTCATCGAGGATCCCACCCGCATTTATCGGGCGGTGCGCTTTGCGGTGCGCTTGGGCTTCGCCCTGGACTC
GACCACAGAAAAATGGATCCGCGCTGCTGTGGCCAGTGGTCTGCACGATGCCGTCGGCGGGGATCGCCTCAAGCAGGAGC
TGGCCTACATTCTCGGATCCCGCGATTGGCCCCAAGCCTTTGAGCAGCTGGCAGAATGGGGGGCTTTGCGCTGTATTCAC
CCCGACCTGGAGTGGGATCCCTCCCTGTGCCGGCGGTTGCAACGGGTGGGCCGCTGGGCCTATCACTTTCGCCGCCGCTA
TCCTGAGCTGGGATCCCAGGAGATCTGGCAACTGCGCCTAGAGGCTCTCCTCCTCACGCTGCCCCAAGCCCCCCAGGTGG
CCAGCCAACTCCACCTTACCCAAGCAGGCATCGAACGCCTCAGCCATTCCTCCTATTACCAAACCCTGTTGGCCCAATTG
GACCCCGGCACCCTCTCTCCGGCCCAGGTGGTGCAACTGCTGCAGGGGCTGCGGATCCCGGCGGTGATTTTGTTGGCTGG
GATCGCCCCCAAGCCGGCCCGGCGGTTGATCTGGCGCTACTTGCAGGAGTGGTACTGGGTGAAGCCGCTCCTCAACGGCC
ACGATCTGCGTCGTCTGGGTTACAAGCCAGGTCGCCCCTTCCAAGCCATTTTGGAGCAACTGCGTTGCCTCACCCTGAAC
GGCGAACTCACCACCCCGGCAGAAGCTGAAGCCTGGCTACAAGAACACTTCCCCCTGCCGCAAGCTCAATACCGAGGAAG
AAAGTAG

Upstream 100 bases:

>100_bases
CGGAGTTGAGCAGCCCTTCATTTCTTCTTGTCCGACTCCAACAAGAGGGATCCTGGCTTAGGCCAGGATGGAAGGGGGGA
AAACGACAACTCTTGCCGCA

Downstream 100 bases:

>100_bases
AAGGGCAAATCAGTCGAAATAGAAGAGAGTGACCAACTTGTGTTGTTCCTCAGCATGCTTGCAGGCATCCAGCAGCGTGA
CGCTGTCGTGGAAGACAAAG

Product: polyA polymerase family protein

Products: NA

Alternate protein names: tRNA CCA-pyrophosphorylase; tRNA adenylyl-/cytidylyl- transferase; tRNA nucleotidyltransferase; tRNA-NT [H]

Number of amino acids: Translated: 908; Mature: 908

Protein sequence:

>908_residues
MDLILCHQSADFDTLGAAVGAARLYPGARIALAGGSLPGVQEFLALYRDEFPLIELRSVDPGQVQRWIVVDCHDPDRLGK
AAAWLSVPGTQIEIFDHHLRDPETPPDGFWPQQQVNCHIEAVGATCTLLVERLQAAGIPLSPFERLALALGIHMDTGSLT
FPETTARDAAALSWLLDQGVNLVLLRRFLGDGLTPEMRELLSQGLAQMQVQQVGEYRLGEWLLELPEFVPGLAGLVMRLM
DLTGVDVLLLVARQGERLSLIGRARQEFAQLGRVMALYGGGGHDCAAAATLKASPEQPLPNPAQVMAALRQAVQERIPPP
VTAKDLMSAPVRTIRPEITIDEAQRVLLRYGHSGLVVVDAQGRLVGVISRRDIDIALHHGFGHAPVKGYMTTDVKTLSPD
TPLAEIQRLMVQWDIGRLPVLQDGQLVGIVTRTDVLRHLHELPALSPQLALPTLSCPLDLAFAALSERHRQLLEQAAHIA
DEKGLRLYLVGGTVRDLLLHRWGRQPSPNLERLDLDLVVDGPYSPALDGIDPPGWGLILGQALKQHFPEARLEIHGKFQT
AALIWPGGFCVDIASARTEFYPYPASPPEVAMGSIQQDLYRRDFSINALALRLNGPQRGQVLDFFGGQADLQQGIIRALH
PNSFIEDPTRIYRAVRFAVRLGFALDSTTEKWIRAAVASGLHDAVGGDRLKQELAYILGSRDWPQAFEQLAEWGALRCIH
PDLEWDPSLCRRLQRVGRWAYHFRRRYPELGSQEIWQLRLEALLLTLPQAPQVASQLHLTQAGIERLSHSSYYQTLLAQL
DPGTLSPAQVVQLLQGLRIPAVILLAGIAPKPARRLIWRYLQEWYWVKPLLNGHDLRRLGYKPGRPFQAILEQLRCLTLN
GELTTPAEAEAWLQEHFPLPQAQYRGRK

Sequences:

>Translated_908_residues
MDLILCHQSADFDTLGAAVGAARLYPGARIALAGGSLPGVQEFLALYRDEFPLIELRSVDPGQVQRWIVVDCHDPDRLGK
AAAWLSVPGTQIEIFDHHLRDPETPPDGFWPQQQVNCHIEAVGATCTLLVERLQAAGIPLSPFERLALALGIHMDTGSLT
FPETTARDAAALSWLLDQGVNLVLLRRFLGDGLTPEMRELLSQGLAQMQVQQVGEYRLGEWLLELPEFVPGLAGLVMRLM
DLTGVDVLLLVARQGERLSLIGRARQEFAQLGRVMALYGGGGHDCAAAATLKASPEQPLPNPAQVMAALRQAVQERIPPP
VTAKDLMSAPVRTIRPEITIDEAQRVLLRYGHSGLVVVDAQGRLVGVISRRDIDIALHHGFGHAPVKGYMTTDVKTLSPD
TPLAEIQRLMVQWDIGRLPVLQDGQLVGIVTRTDVLRHLHELPALSPQLALPTLSCPLDLAFAALSERHRQLLEQAAHIA
DEKGLRLYLVGGTVRDLLLHRWGRQPSPNLERLDLDLVVDGPYSPALDGIDPPGWGLILGQALKQHFPEARLEIHGKFQT
AALIWPGGFCVDIASARTEFYPYPASPPEVAMGSIQQDLYRRDFSINALALRLNGPQRGQVLDFFGGQADLQQGIIRALH
PNSFIEDPTRIYRAVRFAVRLGFALDSTTEKWIRAAVASGLHDAVGGDRLKQELAYILGSRDWPQAFEQLAEWGALRCIH
PDLEWDPSLCRRLQRVGRWAYHFRRRYPELGSQEIWQLRLEALLLTLPQAPQVASQLHLTQAGIERLSHSSYYQTLLAQL
DPGTLSPAQVVQLLQGLRIPAVILLAGIAPKPARRLIWRYLQEWYWVKPLLNGHDLRRLGYKPGRPFQAILEQLRCLTLN
GELTTPAEAEAWLQEHFPLPQAQYRGRK
>Mature_908_residues
MDLILCHQSADFDTLGAAVGAARLYPGARIALAGGSLPGVQEFLALYRDEFPLIELRSVDPGQVQRWIVVDCHDPDRLGK
AAAWLSVPGTQIEIFDHHLRDPETPPDGFWPQQQVNCHIEAVGATCTLLVERLQAAGIPLSPFERLALALGIHMDTGSLT
FPETTARDAAALSWLLDQGVNLVLLRRFLGDGLTPEMRELLSQGLAQMQVQQVGEYRLGEWLLELPEFVPGLAGLVMRLM
DLTGVDVLLLVARQGERLSLIGRARQEFAQLGRVMALYGGGGHDCAAAATLKASPEQPLPNPAQVMAALRQAVQERIPPP
VTAKDLMSAPVRTIRPEITIDEAQRVLLRYGHSGLVVVDAQGRLVGVISRRDIDIALHHGFGHAPVKGYMTTDVKTLSPD
TPLAEIQRLMVQWDIGRLPVLQDGQLVGIVTRTDVLRHLHELPALSPQLALPTLSCPLDLAFAALSERHRQLLEQAAHIA
DEKGLRLYLVGGTVRDLLLHRWGRQPSPNLERLDLDLVVDGPYSPALDGIDPPGWGLILGQALKQHFPEARLEIHGKFQT
AALIWPGGFCVDIASARTEFYPYPASPPEVAMGSIQQDLYRRDFSINALALRLNGPQRGQVLDFFGGQADLQQGIIRALH
PNSFIEDPTRIYRAVRFAVRLGFALDSTTEKWIRAAVASGLHDAVGGDRLKQELAYILGSRDWPQAFEQLAEWGALRCIH
PDLEWDPSLCRRLQRVGRWAYHFRRRYPELGSQEIWQLRLEALLLTLPQAPQVASQLHLTQAGIERLSHSSYYQTLLAQL
DPGTLSPAQVVQLLQGLRIPAVILLAGIAPKPARRLIWRYLQEWYWVKPLLNGHDLRRLGYKPGRPFQAILEQLRCLTLN
GELTTPAEAEAWLQEHFPLPQAQYRGRK

Specific function: Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing

COG id: COG0617

COG function: function code J; tRNA nucleotidyltransferase/poly(A) polymerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. Bacterial CCA-adding enzyme type 3 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789436, Length=245, Percent_Identity=33.0612244897959, Blast_Score=79, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6321016, Length=196, Percent_Identity=29.0816326530612, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023068
- InterPro:   IPR002646 [H]

Pfam domain/function: PF01743 PolyA_pol [H]

EC number: =2.7.7.21; =2.7.7.25 [H]

Molecular weight: Translated: 100835; Mature: 100835

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLILCHQSADFDTLGAAVGAARLYPGARIALAGGSLPGVQEFLALYRDEFPLIELRSVD
CCEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEECCC
PGQVQRWIVVDCHDPDRLGKAAAWLSVPGTQIEIFDHHLRDPETPPDGFWPQQQVNCHIE
CCCCCEEEEEECCCHHHHCCHHHEEECCCCEEEEEHHHCCCCCCCCCCCCCCCCCCEEEE
AVGATCTLLVERLQAAGIPLSPFERLALALGIHMDTGSLTFPETTARDAAALSWLLDQGV
EHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHCCC
NLVLLRRFLGDGLTPEMRELLSQGLAQMQVQQVGEYRLGEWLLELPEFVPGLAGLVMRLM
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
DLTGVDVLLLVARQGERLSLIGRARQEFAQLGRVMALYGGGGHDCAAAATLKASPEQPLP
HHCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHEECCCCCCCCC
NPAQVMAALRQAVQERIPPPVTAKDLMSAPVRTIRPEITIDEAQRVLLRYGHSGLVVVDA
CHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHCCCCCHHHHHHHHHHCCCCCEEEEEC
QGRLVGVISRRDIDIALHHGFGHAPVKGYMTTDVKTLSPDTPLAEIQRLMVQWDIGRLPV
CCCEEEEEECCCEEEEEECCCCCCCCCCEEECCCEECCCCCCHHHHHHHHHHHCCCCCCE
LQDGQLVGIVTRTDVLRHLHELPALSPQLALPTLSCPLDLAFAALSERHRQLLEQAAHIA
ECCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DEKGLRLYLVGGTVRDLLLHRWGRQPSPNLERLDLDLVVDGPYSPALDGIDPPGWGLILG
CCCCCEEEEECCHHHHHHHHHHCCCCCCCHHHEEEEEEECCCCCCCCCCCCCCCHHHHHH
QALKQHFPEARLEIHGKFQTAALIWPGGFCVDIASARTEFYPYPASPPEVAMGSIQQDLY
HHHHHHCCCCEEEEECCEEEEEEEECCCCEEEHHHHCCCCCCCCCCCHHHHHHHHHHHHH
RRDFSINALALRLNGPQRGQVLDFFGGQADLQQGIIRALHPNSFIEDPTRIYRAVRFAVR
HCCCCCEEEEEEECCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
LGFALDSTTEKWIRAAVASGLHDAVGGDRLKQELAYILGSRDWPQAFEQLAEWGALRCIH
HHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEC
PDLEWDPSLCRRLQRVGRWAYHFRRRYPELGSQEIWQLRLEALLLTLPQAPQVASQLHLT
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
QAGIERLSHSSYYQTLLAQLDPGTLSPAQVVQLLQGLRIPAVILLAGIAPKPARRLIWRY
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHH
LQEWYWVKPLLNGHDLRRLGYKPGRPFQAILEQLRCLTLNGELTTPAEAEAWLQEHFPLP
HHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHEEEECCCCCCCHHHHHHHHHCCCCC
QAQYRGRK
HHHCCCCC
>Mature Secondary Structure
MDLILCHQSADFDTLGAAVGAARLYPGARIALAGGSLPGVQEFLALYRDEFPLIELRSVD
CCEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEECCC
PGQVQRWIVVDCHDPDRLGKAAAWLSVPGTQIEIFDHHLRDPETPPDGFWPQQQVNCHIE
CCCCCEEEEEECCCHHHHCCHHHEEECCCCEEEEEHHHCCCCCCCCCCCCCCCCCCEEEE
AVGATCTLLVERLQAAGIPLSPFERLALALGIHMDTGSLTFPETTARDAAALSWLLDQGV
EHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHCCC
NLVLLRRFLGDGLTPEMRELLSQGLAQMQVQQVGEYRLGEWLLELPEFVPGLAGLVMRLM
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
DLTGVDVLLLVARQGERLSLIGRARQEFAQLGRVMALYGGGGHDCAAAATLKASPEQPLP
HHCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHEECCCCCCCCC
NPAQVMAALRQAVQERIPPPVTAKDLMSAPVRTIRPEITIDEAQRVLLRYGHSGLVVVDA
CHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHCCCCCHHHHHHHHHHCCCCCEEEEEC
QGRLVGVISRRDIDIALHHGFGHAPVKGYMTTDVKTLSPDTPLAEIQRLMVQWDIGRLPV
CCCEEEEEECCCEEEEEECCCCCCCCCCEEECCCEECCCCCCHHHHHHHHHHHCCCCCCE
LQDGQLVGIVTRTDVLRHLHELPALSPQLALPTLSCPLDLAFAALSERHRQLLEQAAHIA
ECCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DEKGLRLYLVGGTVRDLLLHRWGRQPSPNLERLDLDLVVDGPYSPALDGIDPPGWGLILG
CCCCCEEEEECCHHHHHHHHHHCCCCCCCHHHEEEEEEECCCCCCCCCCCCCCCHHHHHH
QALKQHFPEARLEIHGKFQTAALIWPGGFCVDIASARTEFYPYPASPPEVAMGSIQQDLY
HHHHHHCCCCEEEEECCEEEEEEEECCCCEEEHHHHCCCCCCCCCCCHHHHHHHHHHHHH
RRDFSINALALRLNGPQRGQVLDFFGGQADLQQGIIRALHPNSFIEDPTRIYRAVRFAVR
HCCCCCEEEEEEECCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
LGFALDSTTEKWIRAAVASGLHDAVGGDRLKQELAYILGSRDWPQAFEQLAEWGALRCIH
HHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEC
PDLEWDPSLCRRLQRVGRWAYHFRRRYPELGSQEIWQLRLEALLLTLPQAPQVASQLHLT
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
QAGIERLSHSSYYQTLLAQLDPGTLSPAQVVQLLQGLRIPAVILLAGIAPKPARRLIWRY
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHH
LQEWYWVKPLLNGHDLRRLGYKPGRPFQAILEQLRCLTLNGELTTPAEAEAWLQEHFPLP
HHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHEEEECCCCCCCHHHHHHHHHCCCCC
QAQYRGRK
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA