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The map label for this gene is recR [H]

Identifier: 86610315

GI number: 86610315

Start: 2993670

End: 2994269

Strand: Direct

Name: recR [H]

Synonym: CYB_2895

Alternate gene names: 86610315

Gene position: 2993670-2994269 (Clockwise)

Preceding gene: 86610314

Following gene: 86610317

Centisome position: 98.26

GC content: 61.5

Gene sequence:

>600_bases
ATGTACACTCGCCCCTTGGCTCGCCTCATCGAAGAGCTGCAACGGCTGCCCGGCATTGGCTCCAAAACCGCTCAGCGCCT
AGCTCTCCACTTGATCAACCGGCCTGCCGGCGAGATCGAGGCCCTGGCCAAAGCCCTGCTGGAAGCCAAGCAAACCGTTC
GGCACTGTTCCATCTGCTTCAACTGGTCGGCGGAGGATCCCTGTGAGATTTGCCGTTCGCCGCAGCGGGATCCCTCGCTG
TGGTGCGTGGTGGCCGATGTCAAAGATTTGATTGCGATGGAACGCACCCGCGAGTTCAAGGGGCTTTACCACGTTTTGGG
TGGCCTCATCTCCCCCATGAACGGGATCGGGGTCGATCAACTGCACATCCGCGAGCTGGTGGCTCGGGTGGCACGGGAAA
AACCGCAGGAGCTGATCTTTGCCATCAGCCCCAGCGTAGAGGGGGAAGTAACCATGCACGTGGTCAAGGATTACCTGAAG
CCGGTTGCCCCCACCTTGCGCATGACCCGCCTGGCCTTCGGCCTGCCCATGGGATCCGAGCTGGAATATGCCGACGAGGT
TACCCTGGCCCGTGCCTTGGAAGCGCGGCAGGAGTTGTGA

Upstream 100 bases:

>100_bases
CGATGCGCAAACGCATGGAAGAGCTGACCGGAAACATCAGTCTGCCGGGGTTGGGACTGGGTTGAGCCCCACTTGCTTAA
CCCCGCTTGCTTAACTCTGT

Downstream 100 bases:

>100_bases
GCCGCTCAGCCCATCAATCGCAGCCGGTTACCCCCTCCGCGCAGTAGGTGCTCCACCAGGGGTTGAAGTTGGCAGGATCC
TCCGGCAGAGTGCTGATGTT

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MYTRPLARLIEELQRLPGIGSKTAQRLALHLINRPAGEIEALAKALLEAKQTVRHCSICFNWSAEDPCEICRSPQRDPSL
WCVVADVKDLIAMERTREFKGLYHVLGGLISPMNGIGVDQLHIRELVARVAREKPQELIFAISPSVEGEVTMHVVKDYLK
PVAPTLRMTRLAFGLPMGSELEYADEVTLARALEARQEL

Sequences:

>Translated_199_residues
MYTRPLARLIEELQRLPGIGSKTAQRLALHLINRPAGEIEALAKALLEAKQTVRHCSICFNWSAEDPCEICRSPQRDPSL
WCVVADVKDLIAMERTREFKGLYHVLGGLISPMNGIGVDQLHIRELVARVAREKPQELIFAISPSVEGEVTMHVVKDYLK
PVAPTLRMTRLAFGLPMGSELEYADEVTLARALEARQEL
>Mature_199_residues
MYTRPLARLIEELQRLPGIGSKTAQRLALHLINRPAGEIEALAKALLEAKQTVRHCSICFNWSAEDPCEICRSPQRDPSL
WCVVADVKDLIAMERTREFKGLYHVLGGLISPMNGIGVDQLHIRELVARVAREKPQELIFAISPSVEGEVTMHVVKDYLK
PVAPTLRMTRLAFGLPMGSELEYADEVTLARALEARQEL

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO [H]

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

Organism=Escherichia coli, GI1786678, Length=201, Percent_Identity=38.3084577114428, Blast_Score=139, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967 [H]

Pfam domain/function: PF02132 RecR; PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 22294; Mature: 22294

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: PS00014 ER_TARGET ; PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTRPLARLIEELQRLPGIGSKTAQRLALHLINRPAGEIEALAKALLEAKQTVRHCSICF
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC
NWSAEDPCEICRSPQRDPSLWCVVADVKDLIAMERTREFKGLYHVLGGLISPMNGIGVDQ
CCCCCCHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
LHIRELVARVAREKPQELIFAISPSVEGEVTMHVVKDYLKPVAPTLRMTRLAFGLPMGSE
HHHHHHHHHHHHHCHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LEYADEVTLARALEARQEL
CCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYTRPLARLIEELQRLPGIGSKTAQRLALHLINRPAGEIEALAKALLEAKQTVRHCSICF
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC
NWSAEDPCEICRSPQRDPSLWCVVADVKDLIAMERTREFKGLYHVLGGLISPMNGIGVDQ
CCCCCCHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
LHIRELVARVAREKPQELIFAISPSVEGEVTMHVVKDYLKPVAPTLRMTRLAFGLPMGSE
HHHHHHHHHHHHHCHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LEYADEVTLARALEARQEL
CCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA