Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is ybaB [C]

Identifier: 86610314

GI number: 86610314

Start: 2993299

End: 2993634

Strand: Direct

Name: ybaB [C]

Synonym: CYB_2894

Alternate gene names: 86610314

Gene position: 2993299-2993634 (Clockwise)

Preceding gene: 86610311

Following gene: 86610315

Centisome position: 98.25

GC content: 56.25

Gene sequence:

>336_bases
ATGACTCGAGGCTTTGGCCCCTTCGGCAAAATCCAAGAAGCGCTCAAGAAAGCCCAAGAGGTGCGCGATGGCGCTCAAAG
GCTGCAAAAAGAGCTGGAAGAGATGGAGATCGTCGGCGAAGCCGGCAATGGGCTGGTGAAAGTGACGGTAAACGGCAACC
AAGAACCCCTTAAGGTCTCTCTGGATCCCCAAGTGCTCCAGGAGTCGGTGGATGTGGTAGAAGACTTGCTCCTGACGGCG
ATGGTGAACGCCTACACCCAATCTGCTGAGACGATGCGCAAACGCATGGAAGAGCTGACCGGAAACATCAGTCTGCCGGG
GTTGGGACTGGGTTGA

Upstream 100 bases:

>100_bases
GTGCGGAGCACCTCTGCCCAGACTTGCGAGTGCTTTCACCGGCGATGGGGAAACGGGTAGAGTAGAACAGCAGTATCTGG
ATAACCCAAGAGAGGATCCC

Downstream 100 bases:

>100_bases
GCCCCACTTGCTTAACCCCGCTTGCTTAACTCTGTATGTACACTCGCCCCTTGGCTCGCCTCATCGAAGAGCTGCAACGG
CTGCCCGGCATTGGCTCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MTRGFGPFGKIQEALKKAQEVRDGAQRLQKELEEMEIVGEAGNGLVKVTVNGNQEPLKVSLDPQVLQESVDVVEDLLLTA
MVNAYTQSAETMRKRMEELTGNISLPGLGLG

Sequences:

>Translated_111_residues
MTRGFGPFGKIQEALKKAQEVRDGAQRLQKELEEMEIVGEAGNGLVKVTVNGNQEPLKVSLDPQVLQESVDVVEDLLLTA
MVNAYTQSAETMRKRMEELTGNISLPGLGLG
>Mature_110_residues
TRGFGPFGKIQEALKKAQEVRDGAQRLQKELEEMEIVGEAGNGLVKVTVNGNQEPLKVSLDPQVLQESVDVVEDLLLTAM
VNAYTQSAETMRKRMEELTGNISLPGLGLG

Specific function: Unknown

COG id: COG0718

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0133 family [H]

Homologues:

Organism=Escherichia coli, GI1786677, Length=101, Percent_Identity=34.6534653465347, Blast_Score=73, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004401 [H]

Pfam domain/function: PF02575 DUF149 [H]

EC number: NA

Molecular weight: Translated: 12084; Mature: 11953

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRGFGPFGKIQEALKKAQEVRDGAQRLQKELEEMEIVGEAGNGLVKVTVNGNQEPLKVS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEE
LDPQVLQESVDVVEDLLLTAMVNAYTQSAETMRKRMEELTGNISLPGLGLG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TRGFGPFGKIQEALKKAQEVRDGAQRLQKELEEMEIVGEAGNGLVKVTVNGNQEPLKVS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEE
LDPQVLQESVDVVEDLLLTAMVNAYTQSAETMRKRMEELTGNISLPGLGLG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA