| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86610298
Identifier: 86610298
GI number: 86610298
Start: 2975420
End: 2976730
Strand: Direct
Name: 86610298
Synonym: CYB_2877
Alternate gene names: NA
Gene position: 2975420-2976730 (Clockwise)
Preceding gene: 86610297
Following gene: 86610299
Centisome position: 97.66
GC content: 54.61
Gene sequence:
>1311_bases ATGACGACAACCCTTACAACCCGCAAGCTTCCCCCTTCTACCCACCCTTTTGCGGATGTAGTCCACCGCTTGGAGGCTGG GGGATCGATGCTGCCGGATACGCCGGAAAACCTGATGCAAATTATCGGCCTCTACAAAGCCTATGCGGTGCCGATGGACT TTTACTGGCGCGATCTGCTCTACATTGCCGAGCAGGTGTTTGTGGATCCCTTGCCCTTTTTTAAGTTCATCATTCCCGAA GAATATTTGAAGCTGGCCAACCACTACGCGGGGGATAATGCCGATTTGCGCATTTGGCGCGGCCCCGCTACGGCCCACCC GGAACTGCTGGAGTTCATGGAAAAAGGGGAGCTCAAGCGCAAGCTGCCGCGGATTTTGCATCACCTTTGGCATGACCGCA TCAACATGGAATTTGCCGAAGAATGTATGCGGGCCATGCTCTGGCACCGGGATATGGGGGGCTTGCTGGATCCCTACATG GATTCCGAAGAATACAAGCAAAATGCCGACCGCGCCATCCGCGCCTATTGCCAGGGCAACCCCTTGTTGATGGGGCTATA CAAGCTCTTCCCCGATATGTTTTTGGAGCTGTGCCGCCAGGCCACCATGTACTCGGTGTTGGGCCTGTTTTGGGAGGTGA TGGCTCCGGTCTTTTTTGAGATGAGCGATCTCTACGATGAAGGCAAAATTACCAGCGTGCCGGAGGCGATGAACTTTCTG GTCAACGGGATCTTCGCCATTGCCGGACGACCCATCTACCATCGCGTGCGCATTCGGGGAGAATGGTACGATATTGTGCC CAAATCCAAGGGATTTACCTGGCTATATGAGGCCGCTTTCCCCTATGTAGAGGCCGTGTTTTATCGCACCTCTCCTTTCC GCGGCACCAAGTCCTACAACGCTCAGGCCAACGAAGTTCCCACCAACCAGTTGGACTTTCACTACGGGATCCTCTACGCC GATAAGTTTCCGGTGGGCACCGCCGGGATCCCGCCCACGCTCTTGCACCAGGATATGTACCACTTTTTGCCCCAGTATTT GGTGGAGTATTATCGCAAGCATTGCCGCGGCGAAGAGGACATGCTGATTCAATTGGGGGTTAGCTTCCAGCGCTCCATGT ACAACGTCACCTCAGCCGTGATTCAGGCGGGAAGGGCCGCTTTCTTGTATCCCCTTGATGATCCAAATCCACGGCACTTG ATGATGAACCGCCGTTATTTTGAGGGACAACTCAATCGCTTCACCCGACCGGAATATGGGATCCGGGAAGCAGCCCGCCT CGCCTACATTCAGGATCAGAATTATCGCTAG
Upstream 100 bases:
>100_bases TCTGGAGCCGATCCAGGCAAGCGGGAAACTCCCAGGAATTGAGATCCCAGCAGATGCCCCCTATGGAGCCAGGACTTTTG AAGAGTTGGAGACTTCTTCC
Downstream 100 bases:
>100_bases CCCGTGGCAACTTTAATGATCTCAAAGCCTTTCGAGCAGCAATCCAGTTAGCAACAACTTCACAGCAAAAGGATCCCGGC CATGCCCGATATTGTCGATA
Product: CO2 hydration protein
Products: NA
Alternate protein names: CO2 Hydration Protein ChpX; CO2-Hydration Protein; Carbon Dioxide Hydration Protein; CO2 Hydration; High Affinity CO2 Uptake Protein; Low Affinity CO2 Uptake Protein; Uptake
Number of amino acids: Translated: 436; Mature: 435
Protein sequence:
>436_residues MTTTLTTRKLPPSTHPFADVVHRLEAGGSMLPDTPENLMQIIGLYKAYAVPMDFYWRDLLYIAEQVFVDPLPFFKFIIPE EYLKLANHYAGDNADLRIWRGPATAHPELLEFMEKGELKRKLPRILHHLWHDRINMEFAEECMRAMLWHRDMGGLLDPYM DSEEYKQNADRAIRAYCQGNPLLMGLYKLFPDMFLELCRQATMYSVLGLFWEVMAPVFFEMSDLYDEGKITSVPEAMNFL VNGIFAIAGRPIYHRVRIRGEWYDIVPKSKGFTWLYEAAFPYVEAVFYRTSPFRGTKSYNAQANEVPTNQLDFHYGILYA DKFPVGTAGIPPTLLHQDMYHFLPQYLVEYYRKHCRGEEDMLIQLGVSFQRSMYNVTSAVIQAGRAAFLYPLDDPNPRHL MMNRRYFEGQLNRFTRPEYGIREAARLAYIQDQNYR
Sequences:
>Translated_436_residues MTTTLTTRKLPPSTHPFADVVHRLEAGGSMLPDTPENLMQIIGLYKAYAVPMDFYWRDLLYIAEQVFVDPLPFFKFIIPE EYLKLANHYAGDNADLRIWRGPATAHPELLEFMEKGELKRKLPRILHHLWHDRINMEFAEECMRAMLWHRDMGGLLDPYM DSEEYKQNADRAIRAYCQGNPLLMGLYKLFPDMFLELCRQATMYSVLGLFWEVMAPVFFEMSDLYDEGKITSVPEAMNFL VNGIFAIAGRPIYHRVRIRGEWYDIVPKSKGFTWLYEAAFPYVEAVFYRTSPFRGTKSYNAQANEVPTNQLDFHYGILYA DKFPVGTAGIPPTLLHQDMYHFLPQYLVEYYRKHCRGEEDMLIQLGVSFQRSMYNVTSAVIQAGRAAFLYPLDDPNPRHL MMNRRYFEGQLNRFTRPEYGIREAARLAYIQDQNYR >Mature_435_residues TTTLTTRKLPPSTHPFADVVHRLEAGGSMLPDTPENLMQIIGLYKAYAVPMDFYWRDLLYIAEQVFVDPLPFFKFIIPEE YLKLANHYAGDNADLRIWRGPATAHPELLEFMEKGELKRKLPRILHHLWHDRINMEFAEECMRAMLWHRDMGGLLDPYMD SEEYKQNADRAIRAYCQGNPLLMGLYKLFPDMFLELCRQATMYSVLGLFWEVMAPVFFEMSDLYDEGKITSVPEAMNFLV NGIFAIAGRPIYHRVRIRGEWYDIVPKSKGFTWLYEAAFPYVEAVFYRTSPFRGTKSYNAQANEVPTNQLDFHYGILYAD KFPVGTAGIPPTLLHQDMYHFLPQYLVEYYRKHCRGEEDMLIQLGVSFQRSMYNVTSAVIQAGRAAFLYPLDDPNPRHLM MNRRYFEGQLNRFTRPEYGIREAARLAYIQDQNYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51108; Mature: 50976
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTLTTRKLPPSTHPFADVVHRLEAGGSMLPDTPENLMQIIGLYKAYAVPMDFYWRDLL CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHH YIAEQVFVDPLPFFKFIIPEEYLKLANHYAGDNADLRIWRGPATAHPELLEFMEKGELKR HHHHHHHCCCCHHHHHHCCHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCHHHH KLPRILHHLWHDRINMEFAEECMRAMLWHRDMGGLLDPYMDSEEYKQNADRAIRAYCQGN HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCC PLLMGLYKLFPDMFLELCRQATMYSVLGLFWEVMAPVFFEMSDLYDEGKITSVPEAMNFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH VNGIFAIAGRPIYHRVRIRGEWYDIVPKSKGFTWLYEAAFPYVEAVFYRTSPFRGTKSYN HHHHHHHCCCCEEEEEEEECCEEEECCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCC AQANEVPTNQLDFHYGILYADKFPVGTAGIPPTLLHQDMYHFLPQYLVEYYRKHCRGEED CCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC MLIQLGVSFQRSMYNVTSAVIQAGRAAFLYPLDDPNPRHLMMNRRYFEGQLNRFTRPEYG EEEEECHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHCCHHHHHHHHHCCCCCCC IREAARLAYIQDQNYR HHHHHHHHHHCCCCCC >Mature Secondary Structure TTTLTTRKLPPSTHPFADVVHRLEAGGSMLPDTPENLMQIIGLYKAYAVPMDFYWRDLL CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHH YIAEQVFVDPLPFFKFIIPEEYLKLANHYAGDNADLRIWRGPATAHPELLEFMEKGELKR HHHHHHHCCCCHHHHHHCCHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCHHHH KLPRILHHLWHDRINMEFAEECMRAMLWHRDMGGLLDPYMDSEEYKQNADRAIRAYCQGN HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCC PLLMGLYKLFPDMFLELCRQATMYSVLGLFWEVMAPVFFEMSDLYDEGKITSVPEAMNFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH VNGIFAIAGRPIYHRVRIRGEWYDIVPKSKGFTWLYEAAFPYVEAVFYRTSPFRGTKSYN HHHHHHHCCCCEEEEEEEECCEEEECCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCC AQANEVPTNQLDFHYGILYADKFPVGTAGIPPTLLHQDMYHFLPQYLVEYYRKHCRGEED CCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC MLIQLGVSFQRSMYNVTSAVIQAGRAAFLYPLDDPNPRHLMMNRRYFEGQLNRFTRPEYG EEEEECHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHCCHHHHHHHHHCCCCCCC IREAARLAYIQDQNYR HHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA