| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86610283
Identifier: 86610283
GI number: 86610283
Start: 2960025
End: 2961029
Strand: Direct
Name: 86610283
Synonym: CYB_2862
Alternate gene names: NA
Gene position: 2960025-2961029 (Clockwise)
Preceding gene: 86610282
Following gene: 86610284
Centisome position: 97.16
GC content: 54.53
Gene sequence:
>1005_bases ATGCTGAGTCGCGTGGCCGATTCCATCTACTGGCTCAACCGCTACGTGGAGCGCGCCGAGAACATCGCCCGCTTCATCGA TGTCAATCTCAACCTCATCCTAGACTTGCCCAGCGGTCCCGCTCAGCAGTGGGATCCCATCGTCTACACCACCGGGGATC AGGAGCTGTTTTACCAACGCTATGGCCAGGCAACCCAAGAAACGGTCATCCAGTTCCTGGCTTTTGATAGGGATTACCCC AACTCCATCCTTTCCTGTTTGCGGCTGGCGCGGGAAAATGCCCGTTCTGTGCGGGAGGTCATTTCTTCAGAAATGTGGGA GCGGGTCAACCGCTTTTATTTGATGGTCAAAGAAGCGGCTCAGCAAGGCCCCCACCTGAGTCAGCTCCACGATTTTTTCA CGGAAGTGAAGCTGGCCAGTCACCTATTCGCCGGGGTGATGGATGCCACCATGACCCATGGGGAAGGATGGCATTTTGGC CAGATTGGCCGTCTTTTGGAGCGGGCAGACAAAACGGCGCGCATTTTGGACGTTAAGTATTTTATCTTGCTGCCCTCTCT GCAGTATGTGGGTACGGCTTTGGATGAGCTGCAGTGGATCGCCTTGCTGAAGTCGGCCAGTGCTTATGAAATGTACCGGA AATACAGCCGCCAGCACCGCATCAATCCCAGGGAGGTGGCCTCTTTCCTGATTTTGGATCGGCAATTTCCCCGCTCCATT CAGTTTTGTCTTATTCATGCGGATCGATCCCTGCACCAGATCACCGGCACCCCAGCCGATACCTGGCGGGATCCCAGCGA GCGAGCTTTGGGCCGCCTGCGTTCTGAGCTGGACTACCTGACCATCGACGACATTATGGAGCAGGGCTTACATGAGTTTC TCGACAAATTGCAGCTACAAATGAACCACGTTGGCGATTGCATCTACGAAACTTTCTTTGCCACTCGCCCCTTGCAACCG TCTGAATCCTCTCTACTCTCTCAACGTCAAGCCCAACTGACATGA
Upstream 100 bases:
>100_bases CCGGCCTGACGGGGGTGCTGCTGGTGAAGCTGCGGCGGCTGCTTCGTTTATTGAATTTGAACGGAGCGCGGAGACAAGAA ACTCCAGAGGAGGTAACAGC
Downstream 100 bases:
>100_bases ACGGCCTCGACTCTGAATGCAACGAGAAAAACAGGACACCTGGCCAATTGGGCTGGATCGGCAGCCGACGGGAGTAGATG AGGCAGCCTTTATTGCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MLSRVADSIYWLNRYVERAENIARFIDVNLNLILDLPSGPAQQWDPIVYTTGDQELFYQRYGQATQETVIQFLAFDRDYP NSILSCLRLARENARSVREVISSEMWERVNRFYLMVKEAAQQGPHLSQLHDFFTEVKLASHLFAGVMDATMTHGEGWHFG QIGRLLERADKTARILDVKYFILLPSLQYVGTALDELQWIALLKSASAYEMYRKYSRQHRINPREVASFLILDRQFPRSI QFCLIHADRSLHQITGTPADTWRDPSERALGRLRSELDYLTIDDIMEQGLHEFLDKLQLQMNHVGDCIYETFFATRPLQP SESSLLSQRQAQLT
Sequences:
>Translated_334_residues MLSRVADSIYWLNRYVERAENIARFIDVNLNLILDLPSGPAQQWDPIVYTTGDQELFYQRYGQATQETVIQFLAFDRDYP NSILSCLRLARENARSVREVISSEMWERVNRFYLMVKEAAQQGPHLSQLHDFFTEVKLASHLFAGVMDATMTHGEGWHFG QIGRLLERADKTARILDVKYFILLPSLQYVGTALDELQWIALLKSASAYEMYRKYSRQHRINPREVASFLILDRQFPRSI QFCLIHADRSLHQITGTPADTWRDPSERALGRLRSELDYLTIDDIMEQGLHEFLDKLQLQMNHVGDCIYETFFATRPLQP SESSLLSQRQAQLT >Mature_334_residues MLSRVADSIYWLNRYVERAENIARFIDVNLNLILDLPSGPAQQWDPIVYTTGDQELFYQRYGQATQETVIQFLAFDRDYP NSILSCLRLARENARSVREVISSEMWERVNRFYLMVKEAAQQGPHLSQLHDFFTEVKLASHLFAGVMDATMTHGEGWHFG QIGRLLERADKTARILDVKYFILLPSLQYVGTALDELQWIALLKSASAYEMYRKYSRQHRINPREVASFLILDRQFPRSI QFCLIHADRSLHQITGTPADTWRDPSERALGRLRSELDYLTIDDIMEQGLHEFLDKLQLQMNHVGDCIYETFFATRPLQP SESSLLSQRQAQLT
Specific function: Unknown
COG id: COG2307
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38871; Mature: 38871
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSRVADSIYWLNRYVERAENIARFIDVNLNLILDLPSGPAQQWDPIVYTTGDQELFYQR CCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEECCCHHHHHHH YGQATQETVIQFLAFDRDYPNSILSCLRLARENARSVREVISSEMWERVNRFYLMVKEAA HCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQGPHLSQLHDFFTEVKLASHLFAGVMDATMTHGEGWHFGQIGRLLERADKTARILDVKY HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH FILLPSLQYVGTALDELQWIALLKSASAYEMYRKYSRQHRINPREVASFLILDRQFPRSI HHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHH QFCLIHADRSLHQITGTPADTWRDPSERALGRLRSELDYLTIDDIMEQGLHEFLDKLQLQ HHEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH MNHVGDCIYETFFATRPLQPSESSLLSQRQAQLT HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MLSRVADSIYWLNRYVERAENIARFIDVNLNLILDLPSGPAQQWDPIVYTTGDQELFYQR CCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEECCCHHHHHHH YGQATQETVIQFLAFDRDYPNSILSCLRLARENARSVREVISSEMWERVNRFYLMVKEAA HCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQGPHLSQLHDFFTEVKLASHLFAGVMDATMTHGEGWHFGQIGRLLERADKTARILDVKY HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH FILLPSLQYVGTALDELQWIALLKSASAYEMYRKYSRQHRINPREVASFLILDRQFPRSI HHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHH QFCLIHADRSLHQITGTPADTWRDPSERALGRLRSELDYLTIDDIMEQGLHEFLDKLQLQ HHEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH MNHVGDCIYETFFATRPLQPSESSLLSQRQAQLT HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA