Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is paaY [C]

Identifier: 86610284

GI number: 86610284

Start: 2961046

End: 2961606

Strand: Direct

Name: paaY [C]

Synonym: CYB_2863

Alternate gene names: 86610284

Gene position: 2961046-2961606 (Clockwise)

Preceding gene: 86610283

Following gene: 86610289

Centisome position: 97.19

GC content: 62.03

Gene sequence:

>561_bases
ATGCAACGAGAAAAACAGGACACCTGGCCAATTGGGCTGGATCGGCAGCCGACGGGAGTAGATGAGGCAGCCTTTATTGC
CGCCAATGCCATACTGATCGGCGATGTCCATCTTTCGGAAGCGGTGAGCATCTGGTACGGGGCTATCCTGCGCGGGGATC
TCTCGCCCATTGTGATTGGCCGCCGCAGCAACATCCAAGATGGAGCCATCCTGCACGGGGATCCCGGACAGCCGACCCTG
GTTGGCGAGGAAGTGACCGTAGGCCATCGAGCGGTCATCCACAGTGCCCACATCGAGGGGGGATGTCTGATCGGGATTGG
GGCCATTATCTTGAACGGGGTCACCATCGGGGCAGGCAGCATGGTGGGAGCTGGAGCGGTGGTCACCCGGTCTGTGCCAC
CCCACTCTTTGGCGGCGGGGATCCCGGCCAAGGTTATCCGCACCCTCACCGAGGAAGAGGTCAAGCAACTGCGCCTTCAC
GCCCAGCACTACGTGGATTTGGCGCTTCAGCATGCCAGCCGCTTTGGCCGGTGGAGCAGAGGTTCGGGCGAGCGGCTCTG
A

Upstream 100 bases:

>100_bases
ATCTACGAAACTTTCTTTGCCACTCGCCCCTTGCAACCGTCTGAATCCTCTCTACTCTCTCAACGTCAAGCCCAACTGAC
ATGAACGGCCTCGACTCTGA

Downstream 100 bases:

>100_bases
ACCTATTTTGCAAGCCGTCTCTCAACAGCCGGGATCCGCGCAGAGCACCCAGGTATCTTTGCTGCCGCCCCCCTGGGAGG
AGTTCACCACCAGAGATCCC

Product: hexapaptide repeat-containing transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MQREKQDTWPIGLDRQPTGVDEAAFIAANAILIGDVHLSEAVSIWYGAILRGDLSPIVIGRRSNIQDGAILHGDPGQPTL
VGEEVTVGHRAVIHSAHIEGGCLIGIGAIILNGVTIGAGSMVGAGAVVTRSVPPHSLAAGIPAKVIRTLTEEEVKQLRLH
AQHYVDLALQHASRFGRWSRGSGERL

Sequences:

>Translated_186_residues
MQREKQDTWPIGLDRQPTGVDEAAFIAANAILIGDVHLSEAVSIWYGAILRGDLSPIVIGRRSNIQDGAILHGDPGQPTL
VGEEVTVGHRAVIHSAHIEGGCLIGIGAIILNGVTIGAGSMVGAGAVVTRSVPPHSLAAGIPAKVIRTLTEEEVKQLRLH
AQHYVDLALQHASRFGRWSRGSGERL
>Mature_186_residues
MQREKQDTWPIGLDRQPTGVDEAAFIAANAILIGDVHLSEAVSIWYGAILRGDLSPIVIGRRSNIQDGAILHGDPGQPTL
VGEEVTVGHRAVIHSAHIEGGCLIGIGAIILNGVTIGAGSMVGAGAVVTRSVPPHSLAAGIPAKVIRTLTEEEVKQLRLH
AQHYVDLALQHASRFGRWSRGSGERL

Specific function: Phenylacetic acid aerobic catabolism. [C]

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI1787667, Length=137, Percent_Identity=42.3357664233577, Blast_Score=106, Evalue=8e-25,
Organism=Escherichia coli, GI87082240, Length=153, Percent_Identity=38.562091503268, Blast_Score=105, Evalue=1e-24,
Organism=Escherichia coli, GI87081681, Length=150, Percent_Identity=36, Blast_Score=91, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001451
- InterPro:   IPR011004 [H]

Pfam domain/function: PF00132 Hexapep [H]

EC number: NA

Molecular weight: Translated: 19673; Mature: 19673

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: PS00101 HEXAPEP_TRANSFERASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQREKQDTWPIGLDRQPTGVDEAAFIAANAILIGDVHLSEAVSIWYGAILRGDLSPIVIG
CCCCCCCCCCCCCCCCCCCCCHHHHHHHCEEEEECCHHHHHHHHHHHHHHHCCCCEEEEE
RRSNIQDGAILHGDPGQPTLVGEEVTVGHRAVIHSAHIEGGCLIGIGAIILNGVTIGAGS
CCCCCCCCCEEECCCCCCCEECCEECCCHHHEEEECCCCCCCCEEHHHHHHCCEEECCCC
MVGAGAVVTRSVPPHSLAAGIPAKVIRTLTEEEVKQLRLHAQHYVDLALQHASRFGRWSR
CCCCCEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GSGERL
CCCCCC
>Mature Secondary Structure
MQREKQDTWPIGLDRQPTGVDEAAFIAANAILIGDVHLSEAVSIWYGAILRGDLSPIVIG
CCCCCCCCCCCCCCCCCCCCCHHHHHHHCEEEEECCHHHHHHHHHHHHHHHCCCCEEEEE
RRSNIQDGAILHGDPGQPTLVGEEVTVGHRAVIHSAHIEGGCLIGIGAIILNGVTIGAGS
CCCCCCCCCEEECCCCCCCEECCEECCCHHHEEEECCCCCCCCEEHHHHHHCCEEECCCC
MVGAGAVVTRSVPPHSLAAGIPAKVIRTLTEEEVKQLRLHAQHYVDLALQHASRFGRWSR
CCCCCEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GSGERL
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]