| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86610221
Identifier: 86610221
GI number: 86610221
Start: 2896427
End: 2896981
Strand: Direct
Name: 86610221
Synonym: CYB_2797
Alternate gene names: NA
Gene position: 2896427-2896981 (Clockwise)
Preceding gene: 86610220
Following gene: 86610223
Centisome position: 95.07
GC content: 57.12
Gene sequence:
>555_bases ATGGGCGAGCCGAAAGCAGAAAAGTACTCGTTTGAGTTCGAGGATCCCATGCAACCGAGCTATTGCGTCGGAGATAAGTC CAAAATGGGTGTTGAGGTGTCGAAAATTGGGATCCCCATGCCCTTGCTCCCTGATCCTGGCTCAGTTGGGCGAAAGAAAG CTTCTTCCGGCACTCAAGCTCTGTCTCCGGCAGCCAAGCGTCTGCTGCGCCTCTATCACGGTGGTAGCTTCATCTTTCTG GGCCTGTTGTGGCTGGTGGTCGGGATCCCCAGTCTCTGGGCTTTGCGAGCGGATATAGCCCGCCTGTGGGATTACTTTAC TTGGACGGGCCTGCGATATGCCTTGTTTCACCGCCCAGGATGGCCGACTTTGGGGTTGTTGCTCTGTGTCAGCTTCACGA TGGGGATCCTGATCGCCCAAAGCCGCTATGAGCTGTTCGGCCTGTATCCGGTGGAGCGTCTCATGCTGGAGCAGCAATCC CGCTGGATCCTGTCCTTGCCGGTGTGGCATCCGCTGCGGCGCTGGTTGGTGCGCAGGTTGGATACTCAAGATTAG
Upstream 100 bases:
>100_bases CGGCAGATGCTTTGAGCAGATGCTTTGATCAGTGCCTTTTTGGATGGCGCTGTGCAGCGGGAGAGCCACAACTGGGCTCC CTGTGCATCGATCCCTTAAA
Downstream 100 bases:
>100_bases GTTTTGGCTGCCACTTGGGATCCCTGCCGGCACCGAGGCAAAATCTCGTTTGCGTGCGGCTGAAATCCCGCACAAGCACC ACTTCCGAAGCAGCAGGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MGEPKAEKYSFEFEDPMQPSYCVGDKSKMGVEVSKIGIPMPLLPDPGSVGRKKASSGTQALSPAAKRLLRLYHGGSFIFL GLLWLVVGIPSLWALRADIARLWDYFTWTGLRYALFHRPGWPTLGLLLCVSFTMGILIAQSRYELFGLYPVERLMLEQQS RWILSLPVWHPLRRWLVRRLDTQD
Sequences:
>Translated_184_residues MGEPKAEKYSFEFEDPMQPSYCVGDKSKMGVEVSKIGIPMPLLPDPGSVGRKKASSGTQALSPAAKRLLRLYHGGSFIFL GLLWLVVGIPSLWALRADIARLWDYFTWTGLRYALFHRPGWPTLGLLLCVSFTMGILIAQSRYELFGLYPVERLMLEQQS RWILSLPVWHPLRRWLVRRLDTQD >Mature_183_residues GEPKAEKYSFEFEDPMQPSYCVGDKSKMGVEVSKIGIPMPLLPDPGSVGRKKASSGTQALSPAAKRLLRLYHGGSFIFLG LLWLVVGIPSLWALRADIARLWDYFTWTGLRYALFHRPGWPTLGLLLCVSFTMGILIAQSRYELFGLYPVERLMLEQQSR WILSLPVWHPLRRWLVRRLDTQD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21039; Mature: 20908
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEPKAEKYSFEFEDPMQPSYCVGDKSKMGVEVSKIGIPMPLLPDPGSVGRKKASSGTQA CCCCCCCCCCCCCCCCCCCCEECCCCCCCCEEHHHCCCCCCCCCCCCCCCCHHCCCCCHH LSPAAKRLLRLYHGGSFIFLGLLWLVVGIPSLWALRADIARLWDYFTWTGLRYALFHRPG HHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC WPTLGLLLCVSFTMGILIAQSRYELFGLYPVERLMLEQQSRWILSLPVWHPLRRWLVRRL CCHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHCCEEEECCHHHHHHHHHHHHH DTQD CCCC >Mature Secondary Structure GEPKAEKYSFEFEDPMQPSYCVGDKSKMGVEVSKIGIPMPLLPDPGSVGRKKASSGTQA CCCCCCCCCCCCCCCCCCCEECCCCCCCCEEHHHCCCCCCCCCCCCCCCCHHCCCCCHH LSPAAKRLLRLYHGGSFIFLGLLWLVVGIPSLWALRADIARLWDYFTWTGLRYALFHRPG HHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC WPTLGLLLCVSFTMGILIAQSRYELFGLYPVERLMLEQQSRWILSLPVWHPLRRWLVRRL CCHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHCCEEEECCHHHHHHHHHHHHH DTQD CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA