| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86610218
Identifier: 86610218
GI number: 86610218
Start: 2889963
End: 2890220
Strand: Direct
Name: 86610218
Synonym: CYB_2793
Alternate gene names: NA
Gene position: 2889963-2890220 (Clockwise)
Preceding gene: 86610217
Following gene: 86610220
Centisome position: 94.86
GC content: 57.36
Gene sequence:
>258_bases ATGAGCCGACTGCCTCAGACCACTGCCCACATCCAAATTACCCGCCGCTCTTGGCAAGAGGGTGCCATTGAGGGGGAAGT CAACGCCAATGGTTGGGCTTGGCGCTTTTGCTGGCGCTTTCGGGCCGGAGAGCTCAGAGTGGAGCCTTCTGTGGGGCGGG CTTTGATTTGCGAGCCCTTGAGCCGTTTTCTGGAAAAATCCGACTATCTGCTGGAACCGGGCAGCAACTACTCGTTTGTG ATTCGCAGCAGCTTGTGA
Upstream 100 bases:
>100_bases TGGGTTGAGCTTCTGATACCTCACTCCCCATGCTGGATCTGCTGGCGGCAGCGAGGGAGCCACGCGCTACCCTACAAGGG ATCCCGTCGGGAGATGCCGG
Downstream 100 bases:
>100_bases ACTCTCAATCTGAGCAGATCTGAGCAGAGCTTTTGCCCAGCACCAAAGACCGGGGCTGAGCAATGGAAGGCACCTGCTAC GGTGACCCAGAAACCAGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 85; Mature: 84
Protein sequence:
>85_residues MSRLPQTTAHIQITRRSWQEGAIEGEVNANGWAWRFCWRFRAGELRVEPSVGRALICEPLSRFLEKSDYLLEPGSNYSFV IRSSL
Sequences:
>Translated_85_residues MSRLPQTTAHIQITRRSWQEGAIEGEVNANGWAWRFCWRFRAGELRVEPSVGRALICEPLSRFLEKSDYLLEPGSNYSFV IRSSL >Mature_84_residues SRLPQTTAHIQITRRSWQEGAIEGEVNANGWAWRFCWRFRAGELRVEPSVGRALICEPLSRFLEKSDYLLEPGSNYSFVI RSSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9829; Mature: 9698
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLPQTTAHIQITRRSWQEGAIEGEVNANGWAWRFCWRFRAGELRVEPSVGRALICEPL CCCCCCCCEEEEEEECCCCCCCCCCEECCCCEEEEEEEEECCCCEEECCCCCCCHHHHHH SRFLEKSDYLLEPGSNYSFVIRSSL HHHHHCCCEEECCCCCEEEEEEECC >Mature Secondary Structure SRLPQTTAHIQITRRSWQEGAIEGEVNANGWAWRFCWRFRAGELRVEPSVGRALICEPL CCCCCCCEEEEEEECCCCCCCCCCEECCCCEEEEEEEEECCCCEEECCCCCCCHHHHHH SRFLEKSDYLLEPGSNYSFVIRSSL HHHHHCCCEEECCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA