| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86610191
Identifier: 86610191
GI number: 86610191
Start: 2863171
End: 2865693
Strand: Direct
Name: 86610191
Synonym: CYB_2765
Alternate gene names: NA
Gene position: 2863171-2865693 (Clockwise)
Preceding gene: 86610190
Following gene: 86610192
Centisome position: 93.98
GC content: 56.56
Gene sequence:
>2523_bases ATGTGGTCTAGGGTTACTTCGCGTCGTGTTGCCCAATCAATTGCGGTGCTAGTTTTTGGTTTGGTGCTTTTGGTTTCTCT TCAAGGGTTCGGCTCCAGAAGAACTCTTTTGCCAATACTTACACCTGTGCCCACACCGACCCCGACTTCAACACCCACAG CCACGCCAACACCGACGCCCACGCCGGGAGGCTGTGATCCCAACGCCAACCTGATCCCAGTTGGCACTGTCCAGGGCACT GGCTTCACTTCCCCCCTGGTGAACCAAACAGTCACGGTTTCTGGAATCGTAGTAGGAGACTTTGAAAATGAGGGGGTGGC TGGCCAAACCTATCTCCAGGGCTACTACCTACAAGATGATGGTGACGGGAATCCCGCCACATCAGATGGCATCTTCGTTT TCAGTGGCACAGCTAATAACGTCAGGCTTGGGGATAGGGTTCAGGTGACCGGAACGGTTGCTGAGTTCCGCCAGCAAACC CAGCTCTCCAACGTCACCAGCTTTACTGTCTGTAGCTCTGACAATCCGTTGCCGGCCCCAGTGCAGATCTCTCTACCGCT GACTGCGGAGCAAAGGGAAGCTCTGGAAGGAATGCTGGTCACATTTGGAAATCAGCCCCTGTTTGTAAGCGACTCCTTCT TGCTGGGACGCCACGGGGAGCTGAGTGTGGCCACAGAGCGGTTGTTCACTCCTACGCAAATTGCGGCTCCCAGCCAGGCA GCTGCCATTCAAGCGGAAAACGACCGAAAGCGGATTCGCATTGATGACCGGCTGCTCACCCAAAACCCAGATCCGGTTAT CTACCCCACTCCGGGTGGCCTGAGCGCGGCTAACACTGTGCGCGGCGGCGATCGCGTCAGCAACATCACCGGGATCATGA CCCAGTTGCGAGGCCGGAATGTCAGTGGCGATGTGGATGCGACCATCGACTACCGTATCCACCCCAATGATCCCAACAAC TTGCCCAGGTTTACAGCCACCAACCCTCGCCCGCAAAACCCACCCTCAGTAGGGGGCTCCCTGAGGGTAGCTAGCTTTAA CCTGTTCAACTACTTCAACACCTTTGGCAACGCCTGCTTCCCCAATAACTCCTCCTGTCAGGGAGCCAGCAACGCCACCG AGTTCACCCGCCAGCGGGATAAGCTCATCGAGGCTATTCGCCGCATGGATGCCGATATCGTAGGCCTCAACGAGTTAGAA AACGATGGATACGGTTCGAATAGTTCCATTCAGGATTTGGTGAACGGGCTCAACCAGGTCATGGGGGCAGGAACCTACGC CTTTGTGAATGTTGGAGTGCCCAACCTGGGCGGCGATGCCATCACCAACGGCTTTATCTACAAGCCAGCTACGGTTGAAA TTGCCCCCGGCACTAACCCGGCCTTCCTGGACACAGGGGAATTCACCCAAGGCCCCGGACGCTTCCATCGTCCTCCTCTG GCTGTAACCTTCCGGCAGCGGAGCAACAACGCCACCTTCACTGTTGTGGTCAACCACTTCAAGTCCAAGGTTTCTCCCTG CGATCCTATTGACAACGATCCCTTCCAAGGCAATTGCAACGGCAACCGCACCCGGGCCGCTCAGCAACTCTTGAGCTGGC TCGCCACCAATCCAACTGGCTCCACCGATCCGGATGTGTTGATTATGGGGGATCTCAACTCCTACGCTATGGAGGATCCG ATCAAAACTCTGGAGGCGGGCGGGTTCATCAACCTCAATGGCCCCAACAGCTACTCCTTTAGCTTCCAAGGACAGTGGGG ATCTCTGGATCATGCCCTGGCCAACAGCAGTCTGAGACCCCAAGTTACAGGCTCAGCTAAGTGGCACATCAACGCTGATG AGCCCGTGAGCTTGGACTACACCCTGAGCTTCAAGAGTCCCTCTCAGCAGAGCCTCTTCTACGCCAGCGATCCCTTCCGC TCTTCCGACCACGATCCGGTGCTCGTTGGCTTGAACCTGACTCCGGCCCCAACACCGACACCGACGCCCACACCGACACC AACTCCTCCTTCCGTTAACCTGCCTTTGACTGAAGGCTTTGATAACTGCAACCCTGCTCCAGCCGGCTGGCAGATTGTGG ATGTGGACGGCGACACCAGTCGTTCCTGGCGTTGTGTCAACTCCCTTGCCGAGGCCAACGCTTTCAACGGTCAGCAACCG GGTAATGACTGGCTGATCACTCCTCCTCTGAACCTGGCTTCCGTCAGCAACCCAGTTCTGACCTTCCGCAATCGGAGTTC TTTTAGAGATAACGGCCTTCCTCCTTCGCAACAACTAAGCGTTCTTTACTCCACCAACTACAGCGGTGCAGGCACTCCAG CGGCAGTGAATGCAGCCACTTGGACTGCTCTGACGATTCCCACTCTCTCTACGGGCAGCTTCGTCAACTCCGGCCCGATT TCTCTGGCTGGGATCCAGCCTTCCAACCGTGTTTACATTGCCTTCCGCTATCGCTCTTCTGGTACAGCTTCCGGCTCGGC CACTCGCTGGCGGGTGGATAGTGTCAACATCTCCGGGAACTAG
Upstream 100 bases:
>100_bases TACCTTAACTGCCCCTTTACTCAGATTCCTTCCTGAAGATGGTGTCCATATAGACGGTAAAAATACGGGATCCTTTGAAG TTTCGGGAGGAGTGAAGCAG
Downstream 100 bases:
>100_bases GTGTGGGATCCTAGTGCCAACCTGAGTCTGATTGGCAGTGGCTGGGAAAGTGGATCTGCTTCCTCAGCCGTAACGCTCTC CTATGTGGTCTTGGCCGGGA
Product: endonuclease/exonuclease/phosphatase family protein
Products: NA
Alternate protein names: Extracellular Nuclease; Nuclease; Endonuclease/Exonuclease/Phosphatase Family Protein; 5-Nucleotidase Domain Protein; 5-Nucleotidase Domain-Containing Protein; Endonuclease/Exonuclease/Phosphatase Family; Extracellular Ribonuclease/Nuclease Fusion Protein; Extracellular Nuclease-Like Protein; 5-Nucleotidase; PKD Domain-Containing Protein; Alkaline Phosphatase; Large Secreted Protein; Exported Nuclease; Outer Membrane Adhesin Like Proteiin; LPXTG-Motif Cell Wall Anchor Domain Protein; Calcineurin-Like Phosphoesterase; Endonuclease I; Extracellular Nuclease-Like; Glutamate-Cysteine Ligase/Putative Amino Acid Ligase; PKD Domain Containing Protein; Extracellular Nuclease/Phosphatase; 5-Nucleotidase Family Protein
Number of amino acids: Translated: 840; Mature: 840
Protein sequence:
>840_residues MWSRVTSRRVAQSIAVLVFGLVLLVSLQGFGSRRTLLPILTPVPTPTPTSTPTATPTPTPTPGGCDPNANLIPVGTVQGT GFTSPLVNQTVTVSGIVVGDFENEGVAGQTYLQGYYLQDDGDGNPATSDGIFVFSGTANNVRLGDRVQVTGTVAEFRQQT QLSNVTSFTVCSSDNPLPAPVQISLPLTAEQREALEGMLVTFGNQPLFVSDSFLLGRHGELSVATERLFTPTQIAAPSQA AAIQAENDRKRIRIDDRLLTQNPDPVIYPTPGGLSAANTVRGGDRVSNITGIMTQLRGRNVSGDVDATIDYRIHPNDPNN LPRFTATNPRPQNPPSVGGSLRVASFNLFNYFNTFGNACFPNNSSCQGASNATEFTRQRDKLIEAIRRMDADIVGLNELE NDGYGSNSSIQDLVNGLNQVMGAGTYAFVNVGVPNLGGDAITNGFIYKPATVEIAPGTNPAFLDTGEFTQGPGRFHRPPL AVTFRQRSNNATFTVVVNHFKSKVSPCDPIDNDPFQGNCNGNRTRAAQQLLSWLATNPTGSTDPDVLIMGDLNSYAMEDP IKTLEAGGFINLNGPNSYSFSFQGQWGSLDHALANSSLRPQVTGSAKWHINADEPVSLDYTLSFKSPSQQSLFYASDPFR SSDHDPVLVGLNLTPAPTPTPTPTPTPTPPSVNLPLTEGFDNCNPAPAGWQIVDVDGDTSRSWRCVNSLAEANAFNGQQP GNDWLITPPLNLASVSNPVLTFRNRSSFRDNGLPPSQQLSVLYSTNYSGAGTPAAVNAATWTALTIPTLSTGSFVNSGPI SLAGIQPSNRVYIAFRYRSSGTASGSATRWRVDSVNISGN
Sequences:
>Translated_840_residues MWSRVTSRRVAQSIAVLVFGLVLLVSLQGFGSRRTLLPILTPVPTPTPTSTPTATPTPTPTPGGCDPNANLIPVGTVQGT GFTSPLVNQTVTVSGIVVGDFENEGVAGQTYLQGYYLQDDGDGNPATSDGIFVFSGTANNVRLGDRVQVTGTVAEFRQQT QLSNVTSFTVCSSDNPLPAPVQISLPLTAEQREALEGMLVTFGNQPLFVSDSFLLGRHGELSVATERLFTPTQIAAPSQA AAIQAENDRKRIRIDDRLLTQNPDPVIYPTPGGLSAANTVRGGDRVSNITGIMTQLRGRNVSGDVDATIDYRIHPNDPNN LPRFTATNPRPQNPPSVGGSLRVASFNLFNYFNTFGNACFPNNSSCQGASNATEFTRQRDKLIEAIRRMDADIVGLNELE NDGYGSNSSIQDLVNGLNQVMGAGTYAFVNVGVPNLGGDAITNGFIYKPATVEIAPGTNPAFLDTGEFTQGPGRFHRPPL AVTFRQRSNNATFTVVVNHFKSKVSPCDPIDNDPFQGNCNGNRTRAAQQLLSWLATNPTGSTDPDVLIMGDLNSYAMEDP IKTLEAGGFINLNGPNSYSFSFQGQWGSLDHALANSSLRPQVTGSAKWHINADEPVSLDYTLSFKSPSQQSLFYASDPFR SSDHDPVLVGLNLTPAPTPTPTPTPTPTPPSVNLPLTEGFDNCNPAPAGWQIVDVDGDTSRSWRCVNSLAEANAFNGQQP GNDWLITPPLNLASVSNPVLTFRNRSSFRDNGLPPSQQLSVLYSTNYSGAGTPAAVNAATWTALTIPTLSTGSFVNSGPI SLAGIQPSNRVYIAFRYRSSGTASGSATRWRVDSVNISGN >Mature_840_residues MWSRVTSRRVAQSIAVLVFGLVLLVSLQGFGSRRTLLPILTPVPTPTPTSTPTATPTPTPTPGGCDPNANLIPVGTVQGT GFTSPLVNQTVTVSGIVVGDFENEGVAGQTYLQGYYLQDDGDGNPATSDGIFVFSGTANNVRLGDRVQVTGTVAEFRQQT QLSNVTSFTVCSSDNPLPAPVQISLPLTAEQREALEGMLVTFGNQPLFVSDSFLLGRHGELSVATERLFTPTQIAAPSQA AAIQAENDRKRIRIDDRLLTQNPDPVIYPTPGGLSAANTVRGGDRVSNITGIMTQLRGRNVSGDVDATIDYRIHPNDPNN LPRFTATNPRPQNPPSVGGSLRVASFNLFNYFNTFGNACFPNNSSCQGASNATEFTRQRDKLIEAIRRMDADIVGLNELE NDGYGSNSSIQDLVNGLNQVMGAGTYAFVNVGVPNLGGDAITNGFIYKPATVEIAPGTNPAFLDTGEFTQGPGRFHRPPL AVTFRQRSNNATFTVVVNHFKSKVSPCDPIDNDPFQGNCNGNRTRAAQQLLSWLATNPTGSTDPDVLIMGDLNSYAMEDP IKTLEAGGFINLNGPNSYSFSFQGQWGSLDHALANSSLRPQVTGSAKWHINADEPVSLDYTLSFKSPSQQSLFYASDPFR SSDHDPVLVGLNLTPAPTPTPTPTPTPTPPSVNLPLTEGFDNCNPAPAGWQIVDVDGDTSRSWRCVNSLAEANAFNGQQP GNDWLITPPLNLASVSNPVLTFRNRSSFRDNGLPPSQQLSVLYSTNYSGAGTPAAVNAATWTALTIPTLSTGSFVNSGPI SLAGIQPSNRVYIAFRYRSSGTASGSATRWRVDSVNISGN
Specific function: Unknown
COG id: COG2374
COG function: function code R; Predicted extracellular nuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 89592; Mature: 89592
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWSRVTSRRVAQSIAVLVFGLVLLVSLQGFGSRRTLLPILTPVPTPTPTSTPTATPTPTP CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC TPGGCDPNANLIPVGTVQGTGFTSPLVNQTVTVSGIVVGDFENEGVAGQTYLQGYYLQDD CCCCCCCCCCEEEEEEECCCCCCCHHHCCEEEEEEEEEECCCCCCCCCEEEEEEEEEEEC GDGNPATSDGIFVFSGTANNVRLGDRVQVTGTVAEFRQQTQLSNVTSFTVCSSDNPLPAP CCCCCCCCCCEEEEECCCCCEEECCEEEEEEHHHHHHHHHHHCCCEEEEEECCCCCCCCC VQISLPLTAEQREALEGMLVTFGNQPLFVSDSFLLGRHGELSVATERLFTPTQIAAPSQA EEEEECCCHHHHHHHCCEEEEECCCEEEEECCEEECCCCCEEEHHHHCCCCHHHCCCCCC AAIQAENDRKRIRIDDRLLTQNPDPVIYPTPGGLSAANTVRGGDRVSNITGIMTQLRGRN EEEEECCCCCEEEECCEEECCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC VSGDVDATIDYRIHPNDPNNLPRFTATNPRPQNPPSVGGSLRVASFNLFNYFNTFGNACF CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHCCCCC PNNSSCQGASNATEFTRQRDKLIEAIRRMDADIVGLNELENDGYGSNSSIQDLVNGLNQV CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCCCCCHHHHHHHHHHHH MGAGTYAFVNVGVPNLGGDAITNGFIYKPATVEIAPGTNPAFLDTGEFTQGPGRFHRPPL HCCCCEEEEEECCCCCCCHHHCCCEEECCEEEEECCCCCCCEEECCCCCCCCCCCCCCCE AVTFRQRSNNATFTVVVNHFKSKVSPCDPIDNDPFQGNCNGNRTRAAQQLLSWLATNPTG EEEEEECCCCCEEEEEEEHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC STDPDVLIMGDLNSYAMEDPIKTLEAGGFINLNGPNSYSFSFQGQWGSLDHALANSSLRP CCCCCEEEEECCCCHHHHCCHHHHHCCCEEECCCCCCEEEEECCCCCCHHHHHHCCCCCC QVTGSAKWHINADEPVSLDYTLSFKSPSQQSLFYASDPFRSSDHDPVLVGLNLTPAPTPT EECCCEEEEECCCCCEEEEEEEEECCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCC PTPTPTPTPPSVNLPLTEGFDNCNPAPAGWQIVDVDGDTSRSWRCVNSLAEANAFNGQQP CCCCCCCCCCCCCCCHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCC GNDWLITPPLNLASVSNPVLTFRNRSSFRDNGLPPSQQLSVLYSTNYSGAGTPAAVNAAT CCCEEEECCCCHHHCCCCEEEECCCCCCCCCCCCCCHHEEEEEECCCCCCCCCCEECCEE WTALTIPTLSTGSFVNSGPISLAGIQPSNRVYIAFRYRSSGTASGSATRWRVDSVNISGN EEEEEECCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCEEEEEEEEEECCC >Mature Secondary Structure MWSRVTSRRVAQSIAVLVFGLVLLVSLQGFGSRRTLLPILTPVPTPTPTSTPTATPTPTP CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC TPGGCDPNANLIPVGTVQGTGFTSPLVNQTVTVSGIVVGDFENEGVAGQTYLQGYYLQDD CCCCCCCCCCEEEEEEECCCCCCCHHHCCEEEEEEEEEECCCCCCCCCEEEEEEEEEEEC GDGNPATSDGIFVFSGTANNVRLGDRVQVTGTVAEFRQQTQLSNVTSFTVCSSDNPLPAP CCCCCCCCCCEEEEECCCCCEEECCEEEEEEHHHHHHHHHHHCCCEEEEEECCCCCCCCC VQISLPLTAEQREALEGMLVTFGNQPLFVSDSFLLGRHGELSVATERLFTPTQIAAPSQA EEEEECCCHHHHHHHCCEEEEECCCEEEEECCEEECCCCCEEEHHHHCCCCHHHCCCCCC AAIQAENDRKRIRIDDRLLTQNPDPVIYPTPGGLSAANTVRGGDRVSNITGIMTQLRGRN EEEEECCCCCEEEECCEEECCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC VSGDVDATIDYRIHPNDPNNLPRFTATNPRPQNPPSVGGSLRVASFNLFNYFNTFGNACF CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHCCCCC PNNSSCQGASNATEFTRQRDKLIEAIRRMDADIVGLNELENDGYGSNSSIQDLVNGLNQV CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCCCCCHHHHHHHHHHHH MGAGTYAFVNVGVPNLGGDAITNGFIYKPATVEIAPGTNPAFLDTGEFTQGPGRFHRPPL HCCCCEEEEEECCCCCCCHHHCCCEEECCEEEEECCCCCCCEEECCCCCCCCCCCCCCCE AVTFRQRSNNATFTVVVNHFKSKVSPCDPIDNDPFQGNCNGNRTRAAQQLLSWLATNPTG EEEEEECCCCCEEEEEEEHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC STDPDVLIMGDLNSYAMEDPIKTLEAGGFINLNGPNSYSFSFQGQWGSLDHALANSSLRP CCCCCEEEEECCCCHHHHCCHHHHHCCCEEECCCCCCEEEEECCCCCCHHHHHHCCCCCC QVTGSAKWHINADEPVSLDYTLSFKSPSQQSLFYASDPFRSSDHDPVLVGLNLTPAPTPT EECCCEEEEECCCCCEEEEEEEEECCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCC PTPTPTPTPPSVNLPLTEGFDNCNPAPAGWQIVDVDGDTSRSWRCVNSLAEANAFNGQQP CCCCCCCCCCCCCCCHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCC GNDWLITPPLNLASVSNPVLTFRNRSSFRDNGLPPSQQLSVLYSTNYSGAGTPAAVNAAT CCCEEEECCCCHHHCCCCEEEECCCCCCCCCCCCCCHHEEEEEECCCCCCCCCCEECCEE WTALTIPTLSTGSFVNSGPISLAGIQPSNRVYIAFRYRSSGTASGSATRWRVDSVNISGN EEEEEECCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA