Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86610190

Identifier: 86610190

GI number: 86610190

Start: 2861533

End: 2862999

Strand: Direct

Name: 86610190

Synonym: CYB_2764

Alternate gene names: NA

Gene position: 2861533-2862999 (Clockwise)

Preceding gene: 86610189

Following gene: 86610191

Centisome position: 93.92

GC content: 60.53

Gene sequence:

>1467_bases
ATGGCTGACGCAGTTCCCGTTCGGCGCTACGACCTGTTTGTGCAGGCTTCCCGGCTGCTGCAGCGCTACCGGCAGCTCAC
GCCGGAACTCCGTCCCATAGGGCTAGAGGTGGCTCTGGCCATCCAGTATCACCGCGCTCAGGCCGGATCGGGATCCCTCT
TGCCTTGGGTGGGATCCCCTCGCGGACTGCCCTTGCAGCAAGTGGCCCAGCGCATTTGCGACCCGTTTTACAGCAAAACC
CACCCTCTTTTACCGACCTTGCCCGAAACCGGCGAGCCTTTGGTGTGGCCTCTGTTCAACCAGGGGGAAAACGGTTTGAT
CCGGCCCCTGGCCCCGAGCAAAGTGGGCGGGAAACTGGCGGAACGGCGCTGGCTCAAAGCCTGCAACAGCCAGGAAGGGA
TCGGCTGTCATGCCTTGGCGGCCCACTTGTGGCAAGACGAGCGCTTTTTGGCCGAAGACCGGGATCTCTGTCCTTTCCGC
CTTTATGATGGGCGCTACCCCTTGAGCGTGGATCAAGGGCGGCAGACCTGCGGCTTTGACGATCACCCCTGTGGCTGGCA
GCCGGGACACCCCAAAATGTTGCAGGTGGTGGGCAAAGGCAAACAGGCCGAGATCCTGCTCCCCCACTGGACGGATGACA
TGTGGGCGATGCTCATTCCCTCCCATCGTCCGCTGCCGATTTACCCGCTCTTGGTGATGCTTTACTTTGGCCAGGAAACT
TTGCAAAAGGGGCGGAGCAGCCTCTCCATCGAGCAATTTCGTCTGGATTTTCAGTTTAGCCAGTCTCAACTGCGCCTGTT
GTTCGACACCCACCCTGAGCACCCCTTGAATCGACACCTGCTTACCTGGGCTCAGCAGCCAGAGGTGGAGTGGGGATCCA
CAGAACTCTTGCCCCAGATGCCGCCCCTCCTGCATCAACCTGCTGGGGGCAAGGTGGTTTTGGATCCCGATGAGCCGCCC
CAGTTCCGCAGCAGTGGGATCCCTCACAGCGCCGGGACAGACCCGCTGATGGCAGAACGCCGCCGTCGCCGTCAGTTGGA
GCGCAGCGAACGCCACAACGAGATCTTGCACCAGTTTCGCCGCTGGTTCCGCCTGGCAGGATTGGAAGTCCGGGAGGATC
AGCATACCTTTGACTTTTTGGCCGTGGCGGACGGGCATCTGCTTTTGGCCGAAGTAAAGCTCCTGCACCACAAGGATGCG
GCAGAGGCTTTGCAGGAAGTGGTGGGACAGTTGCTCTACTACGAGCGCTTTGCCCTCGGCCCTTGGATCGAGCAGGGCTT
TTCCGTTCAGAAGGCCGCCGTTTTCGATGGGCCACCGCCAGATCCCTATGTGCGATTTCTAGAAGACCTGGGCATTGCTA
CCTACTGGATCAACGAGCAGCAGATGATCGATGGGCCGGAAAACTCTTTGCGTCTGCTGCGCCAGATGGGGGTGCGGGTA
CGACCGGATCCCGAATTGGGGGATTAG

Upstream 100 bases:

>100_bases
GGTCTGCAGAGACAGTTGCCAAGGTCTCATTTCTTGAGGCCATGGTGCTTGTCTGTGCCAGCTCTTGCCCAAGGCAGTGG
GGAGCTTTTCCTGCAACACT

Downstream 100 bases:

>100_bases
GGGAAAAAGCCTGCCCATGTTCTCCCCTGAGTTTTGACTCAGGCGGGGGTAACTTCTTGTCTTCTTAAGCGTACCTTAAC
TGCCCCTTTACTCAGATTCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 488; Mature: 487

Protein sequence:

>488_residues
MADAVPVRRYDLFVQASRLLQRYRQLTPELRPIGLEVALAIQYHRAQAGSGSLLPWVGSPRGLPLQQVAQRICDPFYSKT
HPLLPTLPETGEPLVWPLFNQGENGLIRPLAPSKVGGKLAERRWLKACNSQEGIGCHALAAHLWQDERFLAEDRDLCPFR
LYDGRYPLSVDQGRQTCGFDDHPCGWQPGHPKMLQVVGKGKQAEILLPHWTDDMWAMLIPSHRPLPIYPLLVMLYFGQET
LQKGRSSLSIEQFRLDFQFSQSQLRLLFDTHPEHPLNRHLLTWAQQPEVEWGSTELLPQMPPLLHQPAGGKVVLDPDEPP
QFRSSGIPHSAGTDPLMAERRRRRQLERSERHNEILHQFRRWFRLAGLEVREDQHTFDFLAVADGHLLLAEVKLLHHKDA
AEALQEVVGQLLYYERFALGPWIEQGFSVQKAAVFDGPPPDPYVRFLEDLGIATYWINEQQMIDGPENSLRLLRQMGVRV
RPDPELGD

Sequences:

>Translated_488_residues
MADAVPVRRYDLFVQASRLLQRYRQLTPELRPIGLEVALAIQYHRAQAGSGSLLPWVGSPRGLPLQQVAQRICDPFYSKT
HPLLPTLPETGEPLVWPLFNQGENGLIRPLAPSKVGGKLAERRWLKACNSQEGIGCHALAAHLWQDERFLAEDRDLCPFR
LYDGRYPLSVDQGRQTCGFDDHPCGWQPGHPKMLQVVGKGKQAEILLPHWTDDMWAMLIPSHRPLPIYPLLVMLYFGQET
LQKGRSSLSIEQFRLDFQFSQSQLRLLFDTHPEHPLNRHLLTWAQQPEVEWGSTELLPQMPPLLHQPAGGKVVLDPDEPP
QFRSSGIPHSAGTDPLMAERRRRRQLERSERHNEILHQFRRWFRLAGLEVREDQHTFDFLAVADGHLLLAEVKLLHHKDA
AEALQEVVGQLLYYERFALGPWIEQGFSVQKAAVFDGPPPDPYVRFLEDLGIATYWINEQQMIDGPENSLRLLRQMGVRV
RPDPELGD
>Mature_487_residues
ADAVPVRRYDLFVQASRLLQRYRQLTPELRPIGLEVALAIQYHRAQAGSGSLLPWVGSPRGLPLQQVAQRICDPFYSKTH
PLLPTLPETGEPLVWPLFNQGENGLIRPLAPSKVGGKLAERRWLKACNSQEGIGCHALAAHLWQDERFLAEDRDLCPFRL
YDGRYPLSVDQGRQTCGFDDHPCGWQPGHPKMLQVVGKGKQAEILLPHWTDDMWAMLIPSHRPLPIYPLLVMLYFGQETL
QKGRSSLSIEQFRLDFQFSQSQLRLLFDTHPEHPLNRHLLTWAQQPEVEWGSTELLPQMPPLLHQPAGGKVVLDPDEPPQ
FRSSGIPHSAGTDPLMAERRRRRQLERSERHNEILHQFRRWFRLAGLEVREDQHTFDFLAVADGHLLLAEVKLLHHKDAA
EALQEVVGQLLYYERFALGPWIEQGFSVQKAAVFDGPPPDPYVRFLEDLGIATYWINEQQMIDGPENSLRLLRQMGVRVR
PDPELGD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55853; Mature: 55721

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADAVPVRRYDLFVQASRLLQRYRQLTPELRPIGLEVALAIQYHRAQAGSGSLLPWVGSP
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEHHCCCCCCCCCCCCCCC
RGLPLQQVAQRICDPFYSKTHPLLPTLPETGEPLVWPLFNQGENGLIRPLAPSKVGGKLA
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHH
ERRWLKACNSQEGIGCHALAAHLWQDERFLAEDRDLCPFRLYDGRYPLSVDQGRQTCGFD
HHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCC
DHPCGWQPGHPKMLQVVGKGKQAEILLPHWTDDMWAMLIPSHRPLPIYPLLVMLYFGQET
CCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCHHHHCCCCCCCCCHHHHHHHHHHCHHH
LQKGRSSLSIEQFRLDFQFSQSQLRLLFDTHPEHPLNRHLLTWAQQPEVEWGSTELLPQM
HHHCHHCCCHHHHEECHHCCCCHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCC
PPLLHQPAGGKVVLDPDEPPQFRSSGIPHSAGTDPLMAERRRRRQLERSERHNEILHQFR
CHHHCCCCCCEEEECCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RWFRLAGLEVREDQHTFDFLAVADGHLLLAEVKLLHHKDAAEALQEVVGQLLYYERFALG
HHHHHCCCEEECCCCCEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
PWIEQGFSVQKAAVFDGPPPDPYVRFLEDLGIATYWINEQQMIDGPENSLRLLRQMGVRV
HHHHCCCCEEEEEECCCCCCCHHHHHHHHCCEEEEEECCHHHCCCCHHHHHHHHHCCCEE
RPDPELGD
CCCCCCCC
>Mature Secondary Structure 
ADAVPVRRYDLFVQASRLLQRYRQLTPELRPIGLEVALAIQYHRAQAGSGSLLPWVGSP
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEHHCCCCCCCCCCCCCCC
RGLPLQQVAQRICDPFYSKTHPLLPTLPETGEPLVWPLFNQGENGLIRPLAPSKVGGKLA
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHH
ERRWLKACNSQEGIGCHALAAHLWQDERFLAEDRDLCPFRLYDGRYPLSVDQGRQTCGFD
HHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCC
DHPCGWQPGHPKMLQVVGKGKQAEILLPHWTDDMWAMLIPSHRPLPIYPLLVMLYFGQET
CCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCHHHHCCCCCCCCCHHHHHHHHHHCHHH
LQKGRSSLSIEQFRLDFQFSQSQLRLLFDTHPEHPLNRHLLTWAQQPEVEWGSTELLPQM
HHHCHHCCCHHHHEECHHCCCCHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCC
PPLLHQPAGGKVVLDPDEPPQFRSSGIPHSAGTDPLMAERRRRRQLERSERHNEILHQFR
CHHHCCCCCCEEEECCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RWFRLAGLEVREDQHTFDFLAVADGHLLLAEVKLLHHKDAAEALQEVVGQLLYYERFALG
HHHHHCCCEEECCCCCEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
PWIEQGFSVQKAAVFDGPPPDPYVRFLEDLGIATYWINEQQMIDGPENSLRLLRQMGVRV
HHHHCCCCEEEEEECCCCCCCHHHHHHHHCCEEEEEECCHHHCCCCHHHHHHHHHCCCEE
RPDPELGD
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA