| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86610173
Identifier: 86610173
GI number: 86610173
Start: 2842241
End: 2842738
Strand: Direct
Name: 86610173
Synonym: CYB_2747
Alternate gene names: NA
Gene position: 2842241-2842738 (Clockwise)
Preceding gene: 86610172
Following gene: 86610174
Centisome position: 93.29
GC content: 60.44
Gene sequence:
>498_bases ATGCTGATAGATGCTGCCTATGGGGTGATCCCCATCCTGCCCCACCCACCCGCCCAGGAAGCTCCCGGACCCGGCTCTTC GCATTTGTATCTGCTCATCCAGCACCAGAAGGGGCATTGGGCTTTCCCAAAAGGGCACAAGGATAGCTCCGAAAGCGACC TGGAGGCGGCGCAGCGAGAATTGCGAGAGGAAACCGGCTTGACCGACTACCAGCTTCTGACCCTGCCCGGCCAGTCTGAC CCTTTGACGCTGCAGGAAGCCTACACCTTTACGGATCCCGAGGGGAACCGAGTGGCCAAAACCGTTACCTACTACGTGGC CTTGCTGCCGCCCCAATTTCCTCCTCCGGCCCTGCAGGTGCAACCGGAGGAGGTGGCCGCCTACCGCTGGTGCTCCTACC CCGAAGCCTTGGAGCAGATCAGCTTTGAAGAAAGTCGGCAACTGCTGCGCCGCTGCCAAGCCCACCTGGAGCAGCTTTGG AAATTGGAGAAGACCTAA
Upstream 100 bases:
>100_bases CTCTCGCCCCTGCAGGGGGTAGAGCGCCCGCAGGTGGATCCCAACGAGGTCTTCGCTCCTAAGCCGCCAGCCATCAAACT CTTTGGAGATTAGCTCCCCA
Downstream 100 bases:
>100_bases GTTCCGTATTTTTACGGAAGAGGTTTATCGGGGTTACCTTTATTATCTTGTCCTGCAGGCTTTCCGTGGGAAGTTCCCGA GTAAGAAAGCCAGCAGACAA
Product: NUDIX family hydrolase
Products: NA
Alternate protein names: DGTP Pyrophosphohydrolase MutT; Pyrophosphohydrolase; NUDIX Hydrolase
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MLIDAAYGVIPILPHPPAQEAPGPGSSHLYLLIQHQKGHWAFPKGHKDSSESDLEAAQRELREETGLTDYQLLTLPGQSD PLTLQEAYTFTDPEGNRVAKTVTYYVALLPPQFPPPALQVQPEEVAAYRWCSYPEALEQISFEESRQLLRRCQAHLEQLW KLEKT
Sequences:
>Translated_165_residues MLIDAAYGVIPILPHPPAQEAPGPGSSHLYLLIQHQKGHWAFPKGHKDSSESDLEAAQRELREETGLTDYQLLTLPGQSD PLTLQEAYTFTDPEGNRVAKTVTYYVALLPPQFPPPALQVQPEEVAAYRWCSYPEALEQISFEESRQLLRRCQAHLEQLW KLEKT >Mature_165_residues MLIDAAYGVIPILPHPPAQEAPGPGSSHLYLLIQHQKGHWAFPKGHKDSSESDLEAAQRELREETGLTDYQLLTLPGQSD PLTLQEAYTFTDPEGNRVAKTVTYYVALLPPQFPPPALQVQPEEVAAYRWCSYPEALEQISFEESRQLLRRCQAHLEQLW KLEKT
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18675; Mature: 18675
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIDAAYGVIPILPHPPAQEAPGPGSSHLYLLIQHQKGHWAFPKGHKDSSESDLEAAQRE CEECCCCCEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHH LREETGLTDYQLLTLPGQSDPLTLQEAYTFTDPEGNRVAKTVTYYVALLPPQFPPPALQV HHHHCCCCCEEEEEECCCCCCEEHHHEEEEECCCCCHHHHHHHEEEEECCCCCCCCCCEE QPEEVAAYRWCSYPEALEQISFEESRQLLRRCQAHLEQLWKLEKT CHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLIDAAYGVIPILPHPPAQEAPGPGSSHLYLLIQHQKGHWAFPKGHKDSSESDLEAAQRE CEECCCCCEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHH LREETGLTDYQLLTLPGQSDPLTLQEAYTFTDPEGNRVAKTVTYYVALLPPQFPPPALQV HHHHCCCCCEEEEEECCCCCCEEHHHEEEEECCCCCHHHHHHHEEEEECCCCCCCCCCEE QPEEVAAYRWCSYPEALEQISFEESRQLLRRCQAHLEQLWKLEKT CHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA