Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86610168

Identifier: 86610168

GI number: 86610168

Start: 2836654

End: 2837769

Strand: Direct

Name: 86610168

Synonym: CYB_2743

Alternate gene names: NA

Gene position: 2836654-2837769 (Clockwise)

Preceding gene: 86610167

Following gene: 86610170

Centisome position: 93.11

GC content: 59.77

Gene sequence:

>1116_bases
ATGCAGGTGAGGTCAAGCCCAAAGAATGAGCCACGGTCTGGGCGGGCTTGGCACAGCCCTTGGGGAATGGCAATCGCCCT
AGTTGGGATCTTGGCCTTGCTGCTGCTCGGTGCCGGCTGTTCTGGCCAGGGGGAATCTGTGGCTTCCCCCCCTGCGTTGA
TCCCTCTCCCACCTCAACCGGGAACCGAGTCGATTCCCATGCCAGTGCGTACCCTGGGCAACAGCCGCTTCAAGCTCCTG
GGCCTGACAGTGGGGGTGGCCGGGAGCGGAGCTGAGGTGTTACTGGATACCGGCTCGGCAGGTTTGCGCATCATAGCGAC
AGCAGCAGGTCGCTTTGGCCTGGAACGGACGGGGATCCCTTCCACTGTGACGTTCGGAGATGGCACGCAATTTATCGGGG
TGTTGGCCCGCGCCCCCTTCAGCATAGGAGGGATCCCCAGTCGGGAGCCGGTAACGATTCAGTTGATCGACCGGATCACC
TGTGTGGACGCCCTGGTGGCCAGTTGTTCAGAGAACTTGTTTGGAGAAGGGCGGCCCTTCGCCGGGATCCTAGGCACGTC
CTTGGATGAGCGCAGCCCCGACCGCGAGCTGTTTAGTCCGCTCACCCGCCTTCCGGGCAATTTCCGCTCTGGGTACATTA
TTCAAACGGGGGGCTTCAACTCCACCCAGGGCCTGTTCACGGTTGGCCTAACGGCTGCCAACACCGTCGGCTTCAATTTC
CGGCAGTTTCCCCAGGTGGGAAGCTTTCCCGACGGCACACCCATCTGGCGGGATGAGGCTTTGCAAGTGGCCTACAGCAT
CAGCAACACTTCTATTCAAAATGCTCTCAGCCCCACCGTTTTTGACAGTGGTTCTTCCGACATTTTTCTCAATGTCAGGC
TGTTGGGGGCAGCTCCCTTCTCCACCTCGACCTTACCCCCTGGGGCAGAGTGGCGAGCTGTGCTGGAGGGGGCTTTTGAC
TACCGCATTCGGGTTGGCTTTCCCATTACGCCCAGCCGGGATCGGATTTTCGTCAACGGCAACCAGGGGGTGCAACTGTT
GGGCATGCCGCTGTTTTTCAATATCGACGTTGCCTTTGATATTGAAGGCGGTCGGATCGGCTTTCGCCTACGTTGA

Upstream 100 bases:

>100_bases
TGCCGCGCGATGCTTCCGGGTTCGAGCATGCTGGCAATGGGAATGTTCTTTGCCGCTTGCAGACAGGATACGCTCCTTAT
CGGCTTAGTGTGGGTGTTCA

Downstream 100 bases:

>100_bases
GACGAAGTTGTTTTCAACATCCAAAAGCATTGGGATCACTTGCGGAGAAGAACTTGCCATGTTCGGCCGAGCCTTGAAAA
CCGGGAACAGCACGCTGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MQVRSSPKNEPRSGRAWHSPWGMAIALVGILALLLLGAGCSGQGESVASPPALIPLPPQPGTESIPMPVRTLGNSRFKLL
GLTVGVAGSGAEVLLDTGSAGLRIIATAAGRFGLERTGIPSTVTFGDGTQFIGVLARAPFSIGGIPSREPVTIQLIDRIT
CVDALVASCSENLFGEGRPFAGILGTSLDERSPDRELFSPLTRLPGNFRSGYIIQTGGFNSTQGLFTVGLTAANTVGFNF
RQFPQVGSFPDGTPIWRDEALQVAYSISNTSIQNALSPTVFDSGSSDIFLNVRLLGAAPFSTSTLPPGAEWRAVLEGAFD
YRIRVGFPITPSRDRIFVNGNQGVQLLGMPLFFNIDVAFDIEGGRIGFRLR

Sequences:

>Translated_371_residues
MQVRSSPKNEPRSGRAWHSPWGMAIALVGILALLLLGAGCSGQGESVASPPALIPLPPQPGTESIPMPVRTLGNSRFKLL
GLTVGVAGSGAEVLLDTGSAGLRIIATAAGRFGLERTGIPSTVTFGDGTQFIGVLARAPFSIGGIPSREPVTIQLIDRIT
CVDALVASCSENLFGEGRPFAGILGTSLDERSPDRELFSPLTRLPGNFRSGYIIQTGGFNSTQGLFTVGLTAANTVGFNF
RQFPQVGSFPDGTPIWRDEALQVAYSISNTSIQNALSPTVFDSGSSDIFLNVRLLGAAPFSTSTLPPGAEWRAVLEGAFD
YRIRVGFPITPSRDRIFVNGNQGVQLLGMPLFFNIDVAFDIEGGRIGFRLR
>Mature_371_residues
MQVRSSPKNEPRSGRAWHSPWGMAIALVGILALLLLGAGCSGQGESVASPPALIPLPPQPGTESIPMPVRTLGNSRFKLL
GLTVGVAGSGAEVLLDTGSAGLRIIATAAGRFGLERTGIPSTVTFGDGTQFIGVLARAPFSIGGIPSREPVTIQLIDRIT
CVDALVASCSENLFGEGRPFAGILGTSLDERSPDRELFSPLTRLPGNFRSGYIIQTGGFNSTQGLFTVGLTAANTVGFNF
RQFPQVGSFPDGTPIWRDEALQVAYSISNTSIQNALSPTVFDSGSSDIFLNVRLLGAAPFSTSTLPPGAEWRAVLEGAFD
YRIRVGFPITPSRDRIFVNGNQGVQLLGMPLFFNIDVAFDIEGGRIGFRLR

Specific function: Unknown

COG id: COG1649

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39239; Mature: 39239

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVRSSPKNEPRSGRAWHSPWGMAIALVGILALLLLGAGCSGQGESVASPPALIPLPPQP
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCC
GTESIPMPVRTLGNSRFKLLGLTVGVAGSGAEVLLDTGSAGLRIIATAAGRFGLERTGIP
CCCCCCCCHHHCCCCEEEEEEEEEEECCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCC
STVTFGDGTQFIGVLARAPFSIGGIPSREPVTIQLIDRITCVDALVASCSENLFGEGRPF
CEEEECCCHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCC
AGILGTSLDERSPDRELFSPLTRLPGNFRSGYIIQTGGFNSTQGLFTVGLTAANTVGFNF
HHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEEEEEEECCCCCCH
RQFPQVGSFPDGTPIWRDEALQVAYSISNTSIQNALSPTVFDSGSSDIFLNVRLLGAAPF
HHCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHCCCCCEECCCCCEEEEEEEEEEECCC
STSTLPPGAEWRAVLEGAFDYRIRVGFPITPSRDRIFVNGNQGVQLLGMPLFFNIDVAFD
CCCCCCCCHHHHHHHCCCEEEEEEECCCCCCCCCEEEEECCCCEEEEECEEEEEEEEEEE
IEGGRIGFRLR
ECCCEEEEEEC
>Mature Secondary Structure
MQVRSSPKNEPRSGRAWHSPWGMAIALVGILALLLLGAGCSGQGESVASPPALIPLPPQP
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCC
GTESIPMPVRTLGNSRFKLLGLTVGVAGSGAEVLLDTGSAGLRIIATAAGRFGLERTGIP
CCCCCCCCHHHCCCCEEEEEEEEEEECCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCC
STVTFGDGTQFIGVLARAPFSIGGIPSREPVTIQLIDRITCVDALVASCSENLFGEGRPF
CEEEECCCHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCC
AGILGTSLDERSPDRELFSPLTRLPGNFRSGYIIQTGGFNSTQGLFTVGLTAANTVGFNF
HHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEEEEEEECCCCCCH
RQFPQVGSFPDGTPIWRDEALQVAYSISNTSIQNALSPTVFDSGSSDIFLNVRLLGAAPF
HHCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHCCCCCEECCCCCEEEEEEEEEEECCC
STSTLPPGAEWRAVLEGAFDYRIRVGFPITPSRDRIFVNGNQGVQLLGMPLFFNIDVAFD
CCCCCCCCHHHHHHHCCCEEEEEEECCCCCCCCCEEEEECCCCEEEEECEEEEEEEEEEE
IEGGRIGFRLR
ECCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA