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The map label for this gene is nifU [H]

Identifier: 86610138

GI number: 86610138

Start: 2803741

End: 2804223

Strand: Direct

Name: nifU [H]

Synonym: CYB_2712

Alternate gene names: 86610138

Gene position: 2803741-2804223 (Clockwise)

Preceding gene: 86610137

Following gene: 86610139

Centisome position: 92.03

GC content: 59.63

Gene sequence:

>483_bases
ATGCCTCTAGATAACCTGCGCGGACTCTATCAGCAAGTCATTCTGGAGCGGTACAAAAAGCCCCACAACTTCGGCAGAGT
GGATCCCGTCCACCGCCACCAACGTGGCCACAACCCCTCCTGTGGCGACACCATCGACCTCACCTTACAACTGGATCCCA
GCCAGGAGCGGATTGTCGATATCAAATTCGAGGGGGCAGGCTGTGCCATTGCCCTGGCTTCTGCCGATCTCATGGCGGAT
GCGGTGCGGGGGCGCACCATCCCCGAAGCTCTGCAGTTGGTGGAGCGCTTCCAAGCCATGATGCGCGGTGGCGAAGAGTT
CCCGCGGGAGCAACGGGCTTTGAACGCCATGAAAGGGGTAGCCCAATTTCCAGTGCGCATCAAATGCGCCAACCTGGCCT
GGCATGCGCTCAAATACGCGCTGGAATCGCCCGAACCCCAGGCCAATGGGTCGGCCTTTGTGAGCAACGAAAACACCGAC
TGA

Upstream 100 bases:

>100_bases
TCCTGAATATCTGAGAACTATGGCTATTCCCGGCGGCAATGGGCTATGAGCGGATCGACTTTTGCCGACCGGCCAGAGCA
GCGACCAACCAGGAGCAACA

Downstream 100 bases:

>100_bases
CCAAAAGGCGCGGCAAGCCCCGTCCTTCAGGGCAGGGAAGGATAGCGCGAACCGTAGCCTATATCGTTGTCATCACGCAT
AGGTCAAGAATACGATTGAG

Product: NifU family SUF system FeS assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MPLDNLRGLYQQVILERYKKPHNFGRVDPVHRHQRGHNPSCGDTIDLTLQLDPSQERIVDIKFEGAGCAIALASADLMAD
AVRGRTIPEALQLVERFQAMMRGGEEFPREQRALNAMKGVAQFPVRIKCANLAWHALKYALESPEPQANGSAFVSNENTD

Sequences:

>Translated_160_residues
MPLDNLRGLYQQVILERYKKPHNFGRVDPVHRHQRGHNPSCGDTIDLTLQLDPSQERIVDIKFEGAGCAIALASADLMAD
AVRGRTIPEALQLVERFQAMMRGGEEFPREQRALNAMKGVAQFPVRIKCANLAWHALKYALESPEPQANGSAFVSNENTD
>Mature_159_residues
PLDNLRGLYQQVILERYKKPHNFGRVDPVHRHQRGHNPSCGDTIDLTLQLDPSQERIVDIKFEGAGCAIALASADLMADA
VRGRTIPEALQLVERFQAMMRGGEEFPREQRALNAMKGVAQFPVRIKCANLAWHALKYALESPEPQANGSAFVSNENTD

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (Potential) [H]

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

Organism=Homo sapiens, GI56699456, Length=136, Percent_Identity=29.4117647058824, Blast_Score=67, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002871
- InterPro:   IPR011341 [H]

Pfam domain/function: PF01592 NifU_N [H]

EC number: NA

Molecular weight: Translated: 17865; Mature: 17733

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLDNLRGLYQQVILERYKKPHNFGRVDPVHRHQRGHNPSCGDTIDLTLQLDPSQERIVD
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEEEECCCCCEEEE
IKFEGAGCAIALASADLMADAVRGRTIPEALQLVERFQAMMRGGEEFPREQRALNAMKGV
EEECCCCEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
AQFPVRIKCANLAWHALKYALESPEPQANGSAFVSNENTD
HHCCEEEEEHHHHHHHHHHHHCCCCCCCCCCEEECCCCCC
>Mature Secondary Structure 
PLDNLRGLYQQVILERYKKPHNFGRVDPVHRHQRGHNPSCGDTIDLTLQLDPSQERIVD
CCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEEEECCCCCEEEE
IKFEGAGCAIALASADLMADAVRGRTIPEALQLVERFQAMMRGGEEFPREQRALNAMKGV
EEECCCCEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
AQFPVRIKCANLAWHALKYALESPEPQANGSAFVSNENTD
HHCCEEEEEHHHHHHHHHHHHCCCCCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]