Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is insQ [H]

Identifier: 86610139

GI number: 86610139

Start: 2804326

End: 2806095

Strand: Direct

Name: insQ [H]

Synonym: CYB_2714

Alternate gene names: 86610139

Gene position: 2804326-2806095 (Clockwise)

Preceding gene: 86610138

Following gene: 86610144

Centisome position: 92.05

GC content: 64.18

Gene sequence:

>1770_bases
GTGCAACGACTTCAAGCCTTCAAGTACGAATTGCTGCCCAACGGCCAGCAGGAACGGCAGATGCGCCGCTTTGCTGGCTC
CTGCCGGTTCGTCTACAACAAAGCACTGGCGTTGCAGAAGGAGCGTCACGAGCAAGGTCAGAAAAAGCTAGGCTATGCGG
GCTTGTGCCAGCTGCTCACCGCGTGGCGCCACAGCGCAGATACGGCGTGGCTGGCGGATGCGCCGGTGCATCCGCTGCAA
CAGGCGCTCCAGGATTTGGAGCGAGCCTACAGCCACTTCTTCGCCCAGCGCGCCGGCTTCCCGAAGTTCAAGAAAAAAGG
CCGGTCGGACAGTTTCCGTTATCCCGACCCCAAGCAAATCCAGCTGGACCAGGCCAACAGCCGCATCTTTCTGCCCAAAC
TTGGCTGGCTGCGTTATCGCAACAGCCGCGACGTGGTGGGCAAGGTCAAGAACGTCACCGTATCCAAGCACGCTGGCAAG
TGGTTCGTGTCGATCCAGACCGAGCGGGAGGTTAATTGGCCTATTCCGCAGGGGGGCGCAGTGGGCATGGACATGGGCAT
TGCCCGCTTGGCTACCCTCTCGGACGGCACGTTCTACGCGCCCCTCAACAGCTTCAAGCGGCACGAGGCGCGCTTGCGCA
AGGCACAGCAAGCGCTCTCCCGCAAAGTCAAGTTCAGCAACAACTGGAAGAAGGCAAAAGCCCGCCTCCAGCGTATTCAT
TCTCAGATGGCCAACGCCCGCCGCGACTTCCTGCACAAGGTCTCGACCGCGATTTGCAAAAGCCAGGCAATCGTGTGCAT
CGAGGACTTGCGGGTGCGGAATATGTCCAAGTTGGCGGCAGGGACAGCAGATGCTCCTGGGAAGAACGTCCGCGCCAAGT
CAGCGTTAAACAAAGCCATTCTCGACCAGGGGTGGTATGAGTTCCGCTGCATGCTGGAGTACAAGCTGGCCTGGAAAGGC
GGCAGGCTCATTGTCGTGCCGCCGCAGAACCCGAGCCGCACCTGTCCATGTTGCGGCCATGTTTCATCAGACAACCGCCA
GACCCAAGCCTGGTTCGAGTGCGTGGCGTGCGGCTATGAGAATAACGCCGATCGCGGCAGCGGGCCGGAGGCCTTTCGCG
GCAGCGGGCCGGAGGCCTTTCGCGGCAGCGGGCCGGAGGCCTTTCGCGGCAGCGGGCCGGAGGCCTTTCGCGGCAGCGGG
CCGGAGGCCTTTCGCGGCAGCGGGCCGGAGGCCTTTCGCGGCAGCGGGCCGGAGGCCTTTCGCGGCAGCGGGCCGGAGGC
CTTTCGCGGCAGCGGGCCGGAGGCCTTTCGCGGCAGCGGGCCGGAGGCCTTTCGCGGCAGCGGGCCGGAGGCCTTTCGCG
GCAGCGGGCCGGAGGCCTTTCGCGGCAGCGGGCCGGAGGCCTTTCGCGGCAGCGGGCCGGAGGCCTTTCTGGTCGGTGCC
ATCAACATCCTTGCTCGCGGGATACAGCTGTTGCGAGACGAAGGGCAGGACACGACCGACGCTGCGGTCGGGATGCGGGT
GGGTGAACCACCCGTGTCAGCCTGGATGGCCTGTGGATCGAACCGCACGGGCGGTCGGAAGCAGGAACCCGCCGAGACGA
CTGCGCAAGGAGCCATCCATGCGCAGCGTGGTAGGAATCTCCGGCCTTCAGGCCGGGGAGGATGTCAAGATTCCCGTTTG
CGACAGCTTCAGCCCCTTTCTCAAAGGGAGAGAGGAGTTGAGGCGATGCACAGCCCGACTGGGAATGCTCCTCTTGGCTC
AATTGGCTGA

Upstream 100 bases:

>100_bases
AAAAGGCGCGGCAAGCCCCGTCCTTCAGGGCAGGGAAGGATAGCGCGAACCGTAGCCTATATCGTTGTCATCACGCATAG
GTCAAGAATACGATTGAGCG

Downstream 100 bases:

>100_bases
TGAACCAGAATCCAGCCCCTGGAGTTGCTCCCACTGGGCGGGGGTAAAGGTGCGCAGGGCTAAAGCATGTAGGCGGCCAT
CCTGCAGGTAAGCTTTCAGG

Product: ISSoc9, transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 589; Mature: 589

Protein sequence:

>589_residues
MQRLQAFKYELLPNGQQERQMRRFAGSCRFVYNKALALQKERHEQGQKKLGYAGLCQLLTAWRHSADTAWLADAPVHPLQ
QALQDLERAYSHFFAQRAGFPKFKKKGRSDSFRYPDPKQIQLDQANSRIFLPKLGWLRYRNSRDVVGKVKNVTVSKHAGK
WFVSIQTEREVNWPIPQGGAVGMDMGIARLATLSDGTFYAPLNSFKRHEARLRKAQQALSRKVKFSNNWKKAKARLQRIH
SQMANARRDFLHKVSTAICKSQAIVCIEDLRVRNMSKLAAGTADAPGKNVRAKSALNKAILDQGWYEFRCMLEYKLAWKG
GRLIVVPPQNPSRTCPCCGHVSSDNRQTQAWFECVACGYENNADRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSG
PEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFLVGA
INILARGIQLLRDEGQDTTDAAVGMRVGEPPVSAWMACGSNRTGGRKQEPAETTAQGAIHAQRGRNLRPSGRGGCQDSRL
RQLQPLSQRERGVEAMHSPTGNAPLGSIG

Sequences:

>Translated_589_residues
MQRLQAFKYELLPNGQQERQMRRFAGSCRFVYNKALALQKERHEQGQKKLGYAGLCQLLTAWRHSADTAWLADAPVHPLQ
QALQDLERAYSHFFAQRAGFPKFKKKGRSDSFRYPDPKQIQLDQANSRIFLPKLGWLRYRNSRDVVGKVKNVTVSKHAGK
WFVSIQTEREVNWPIPQGGAVGMDMGIARLATLSDGTFYAPLNSFKRHEARLRKAQQALSRKVKFSNNWKKAKARLQRIH
SQMANARRDFLHKVSTAICKSQAIVCIEDLRVRNMSKLAAGTADAPGKNVRAKSALNKAILDQGWYEFRCMLEYKLAWKG
GRLIVVPPQNPSRTCPCCGHVSSDNRQTQAWFECVACGYENNADRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSG
PEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFLVGA
INILARGIQLLRDEGQDTTDAAVGMRVGEPPVSAWMACGSNRTGGRKQEPAETTAQGAIHAQRGRNLRPSGRGGCQDSRL
RQLQPLSQRERGVEAMHSPTGNAPLGSIG
>Mature_589_residues
MQRLQAFKYELLPNGQQERQMRRFAGSCRFVYNKALALQKERHEQGQKKLGYAGLCQLLTAWRHSADTAWLADAPVHPLQ
QALQDLERAYSHFFAQRAGFPKFKKKGRSDSFRYPDPKQIQLDQANSRIFLPKLGWLRYRNSRDVVGKVKNVTVSKHAGK
WFVSIQTEREVNWPIPQGGAVGMDMGIARLATLSDGTFYAPLNSFKRHEARLRKAQQALSRKVKFSNNWKKAKARLQRIH
SQMANARRDFLHKVSTAICKSQAIVCIEDLRVRNMSKLAAGTADAPGKNVRAKSALNKAILDQGWYEFRCMLEYKLAWKG
GRLIVVPPQNPSRTCPCCGHVSSDNRQTQAWFECVACGYENNADRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSG
PEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFLVGA
INILARGIQLLRDEGQDTTDAAVGMRVGEPPVSAWMACGSNRTGGRKQEPAETTAQGAIHAQRGRNLRPSGRGGCQDSRL
RQLQPLSQRERGVEAMHSPTGNAPLGSIG

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG0675

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the transposase 35 family [H]

Homologues:

Organism=Homo sapiens, GI118722349, Length=107, Percent_Identity=45.7943925233645, Blast_Score=74, Evalue=4e-13,
Organism=Escherichia coli, GI288549314, Length=345, Percent_Identity=58.2608695652174, Blast_Score=441, Evalue=1e-125,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001959
- InterPro:   IPR010095
- InterPro:   IPR021027 [H]

Pfam domain/function: PF12323 HTH_14; PF01385 Transposase_2; PF07282 Transposase_35 [H]

EC number: NA

Molecular weight: Translated: 64632; Mature: 64632

Theoretical pI: Translated: 10.80; Mature: 10.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRLQAFKYELLPNGQQERQMRRFAGSCRFVYNKALALQKERHEQGQKKLGYAGLCQLLT
CCHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
AWRHSADTAWLADAPVHPLQQALQDLERAYSHFFAQRAGFPKFKKKGRSDSFRYPDPKQI
HHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCEE
QLDQANSRIFLPKLGWLRYRNSRDVVGKVKNVTVSKHAGKWFVSIQTEREVNWPIPQGGA
EEECCCCEEEEECCCHHEECCCCHHHHHHHCEEEECCCCEEEEEEEECCCCCCCCCCCCC
VGMDMGIARLATLSDGTFYAPLNSFKRHEARLRKAQQALSRKVKFSNNWKKAKARLQRIH
CCHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
SQMANARRDFLHKVSTAICKSQAIVCIEDLRVRNMSKLAAGTADAPGKNVRAKSALNKAI
HHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
LDQGWYEFRCMLEYKLAWKGGRLIVVPPQNPSRTCPCCGHVSSDNRQTQAWFECVACGYE
HHCCHHEEEEEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
NNADRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAF
CCCCCCCCCCCCCCCCCCHHCCCCCCHHCCCCCCHHCCCCCCHHCCCCCCHHCCCCCCHH
RGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFLVGA
CCCCCCHHCCCCCCHHCCCCCCHHCCCCCCHHCCCCCCHHCCCCCCCCCCCCCCEEHHHH
INILARGIQLLRDEGQDTTDAAVGMRVGEPPVSAWMACGSNRTGGRKQEPAETTAQGAIH
HHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
AQRGRNLRPSGRGGCQDSRLRQLQPLSQRERGVEAMHSPTGNAPLGSIG
HHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MQRLQAFKYELLPNGQQERQMRRFAGSCRFVYNKALALQKERHEQGQKKLGYAGLCQLLT
CCHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
AWRHSADTAWLADAPVHPLQQALQDLERAYSHFFAQRAGFPKFKKKGRSDSFRYPDPKQI
HHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCEE
QLDQANSRIFLPKLGWLRYRNSRDVVGKVKNVTVSKHAGKWFVSIQTEREVNWPIPQGGA
EEECCCCEEEEECCCHHEECCCCHHHHHHHCEEEECCCCEEEEEEEECCCCCCCCCCCCC
VGMDMGIARLATLSDGTFYAPLNSFKRHEARLRKAQQALSRKVKFSNNWKKAKARLQRIH
CCHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
SQMANARRDFLHKVSTAICKSQAIVCIEDLRVRNMSKLAAGTADAPGKNVRAKSALNKAI
HHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
LDQGWYEFRCMLEYKLAWKGGRLIVVPPQNPSRTCPCCGHVSSDNRQTQAWFECVACGYE
HHCCHHEEEEEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
NNADRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAF
CCCCCCCCCCCCCCCCCCHHCCCCCCHHCCCCCCHHCCCCCCHHCCCCCCHHCCCCCCHH
RGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFLVGA
CCCCCCHHCCCCCCHHCCCCCCHHCCCCCCHHCCCCCCHHCCCCCCCCCCCCCCEEHHHH
INILARGIQLLRDEGQDTTDAAVGMRVGEPPVSAWMACGSNRTGGRKQEPAETTAQGAIH
HHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
AQRGRNLRPSGRGGCQDSRLRQLQPLSQRERGVEAMHSPTGNAPLGSIG
HHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]