Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609963

Identifier: 86609963

GI number: 86609963

Start: 2630603

End: 2632129

Strand: Direct

Name: 86609963

Synonym: CYB_2530

Alternate gene names: NA

Gene position: 2630603-2632129 (Clockwise)

Preceding gene: 86609962

Following gene: 86609965

Centisome position: 86.34

GC content: 64.37

Gene sequence:

>1527_bases
ATGGCTGAATTCGTCCCCCCGCCAGAAGCCCTGCCCACCTTGGATCGCTGGTGGGGATCCCTGCGGCAGCCGCAGGCGGA
ACTGCCCCCGGCAGTGGTTCACCCTTCTTCCGCTCGTTTGGGCAGCCAATCCTGGGATGCCGATGTGGTGATTGCCGGCG
GCACCTTGGGGATCCTTCTGGGGGCGGCTTTGGCCAAGCGGGGCTGGCGGGTGATCCTGCTGGAGCGCGGGATCCTGCGG
GGGCGGGAGCAGGAGTGGAACACCTCACACCAGGAGCTGCAGGTGTTGTTAGAGCTGGAGCTGCTTACCCCGCCCGAGTG
GGAGGCAGTCCAGGTTACCCACTACCCGAGGGGGCGGATTGGCTTTGGGGAGGGCCCCCACTGGTGGGTGGAGGGAGTGC
TGAATGTGGGCGTGGATCCAGTCAGCCTCCTGGAGTTCCTCAAGCAGCATTTCCTGGCCTGGGGGGGCCAAGTGTGGGAG
CAGACTGCCTTTCAAAGTGCCACCGTTCACCCCGATGGGATCTGCCTCCAGACCACCAAGGGACAGATCCGTGCTCAACT
GCTGGTGGATGCCATGGGGCACCGCTCGCCCATCGCGGCCCAGGCTCGCCAAGGGCAGCCGCCAGATAGCGTCTGTCTGG
TGGTGGGATCCTGTGCCCAGGGGCTGCCCGACCAACCCACGGGAGATCTCTTCTACAGCTTTACCCCAGCCCAGAATGGC
TACCAGCCCTTTTGGGAAGCTTTCCCTGCCCGCGATGGGCGCACCACCTATCTTTTTACCTACTGCGACCGGGATCCCCG
GCGGCCTAGTCTAGAGCAGCTCTGGCGGGATTACTGCCGGCTGCTGCCAGCCTACCAGGGGGTGGAGCTGGCCCAGATCC
GCTGGGTGCGCAAGCTATGTGGCGTTTTCCCCGCCTACCGCCGCAGCCCGCTGCAACTGCCCTGGGATCGCCTATTGGCG
GTGGGGGATAGCAGTGGCAGCCAGTCGCCTCTAAGCTTTGGCGGCTTTGGCGCCATGTTGCGCCACCTGGATCGCCTACA
GCAGGGGATCCACGAGGCCCTGGCGCAACGGCAGTTGAACCAGGCAGCCCTGGCCCTGCTGCAACCCTACCAGCCCAACT
TGGCCGTGACCTGGCTATTTCAGAAGGCCATGATTCCCCCTCTGCAGAACAAAAGTTGGGATCCCAATAGCATTAACCGC
CTGTTGAGCAGGGTGTTTGCGGCCATGTTTGCCGCCGGCCCCCAGGTGGTGAAGCCCTTTTTGCAGGATGTAGTGCAGTT
CGGCGGCTTGGCCCAGGCCCTGTGGGGGGCGATGAGTCGGGATCCTCGGTTGGTGGCCGGACTTTTGCCCCGGTTGGGGT
TGCCGGAGTTGGTGGAATGGGCGGGCCACTTTGGCGCCCTTGGCCTCTACGAGCTGCTGCAAAGGCTAACAGATCGCCCG
GAGCCGGAAACCAACCCCCAGGACTACTTCTGGAGACGGCGCCGCGAGGCTTGGCGCTACGGCTGCGGCCGGGATTACCT
CTTTTAG

Upstream 100 bases:

>100_bases
GTGTTGTTTCCGGGCAATGTCGGCGAGGTGGATACGCTGGTTTTGATTCATCGTCGCCTCAAAAGTCGGGGCTTGGTCTA
GAGTGAAGTTCCTCCTGCCG

Downstream 100 bases:

>100_bases
GGGTTCTGACCGTACACCGCCACCCCATAGGGCGGTACCTCCACAAGATCTCCTTGGCTTCCGGCGGGCAGAGAGGATCC
CTTGCCCAACCACTGGGTCT

Product: oxidoreductase, FAD-binding

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 508; Mature: 507

Protein sequence:

>508_residues
MAEFVPPPEALPTLDRWWGSLRQPQAELPPAVVHPSSARLGSQSWDADVVIAGGTLGILLGAALAKRGWRVILLERGILR
GREQEWNTSHQELQVLLELELLTPPEWEAVQVTHYPRGRIGFGEGPHWWVEGVLNVGVDPVSLLEFLKQHFLAWGGQVWE
QTAFQSATVHPDGICLQTTKGQIRAQLLVDAMGHRSPIAAQARQGQPPDSVCLVVGSCAQGLPDQPTGDLFYSFTPAQNG
YQPFWEAFPARDGRTTYLFTYCDRDPRRPSLEQLWRDYCRLLPAYQGVELAQIRWVRKLCGVFPAYRRSPLQLPWDRLLA
VGDSSGSQSPLSFGGFGAMLRHLDRLQQGIHEALAQRQLNQAALALLQPYQPNLAVTWLFQKAMIPPLQNKSWDPNSINR
LLSRVFAAMFAAGPQVVKPFLQDVVQFGGLAQALWGAMSRDPRLVAGLLPRLGLPELVEWAGHFGALGLYELLQRLTDRP
EPETNPQDYFWRRRREAWRYGCGRDYLF

Sequences:

>Translated_508_residues
MAEFVPPPEALPTLDRWWGSLRQPQAELPPAVVHPSSARLGSQSWDADVVIAGGTLGILLGAALAKRGWRVILLERGILR
GREQEWNTSHQELQVLLELELLTPPEWEAVQVTHYPRGRIGFGEGPHWWVEGVLNVGVDPVSLLEFLKQHFLAWGGQVWE
QTAFQSATVHPDGICLQTTKGQIRAQLLVDAMGHRSPIAAQARQGQPPDSVCLVVGSCAQGLPDQPTGDLFYSFTPAQNG
YQPFWEAFPARDGRTTYLFTYCDRDPRRPSLEQLWRDYCRLLPAYQGVELAQIRWVRKLCGVFPAYRRSPLQLPWDRLLA
VGDSSGSQSPLSFGGFGAMLRHLDRLQQGIHEALAQRQLNQAALALLQPYQPNLAVTWLFQKAMIPPLQNKSWDPNSINR
LLSRVFAAMFAAGPQVVKPFLQDVVQFGGLAQALWGAMSRDPRLVAGLLPRLGLPELVEWAGHFGALGLYELLQRLTDRP
EPETNPQDYFWRRRREAWRYGCGRDYLF
>Mature_507_residues
AEFVPPPEALPTLDRWWGSLRQPQAELPPAVVHPSSARLGSQSWDADVVIAGGTLGILLGAALAKRGWRVILLERGILRG
REQEWNTSHQELQVLLELELLTPPEWEAVQVTHYPRGRIGFGEGPHWWVEGVLNVGVDPVSLLEFLKQHFLAWGGQVWEQ
TAFQSATVHPDGICLQTTKGQIRAQLLVDAMGHRSPIAAQARQGQPPDSVCLVVGSCAQGLPDQPTGDLFYSFTPAQNGY
QPFWEAFPARDGRTTYLFTYCDRDPRRPSLEQLWRDYCRLLPAYQGVELAQIRWVRKLCGVFPAYRRSPLQLPWDRLLAV
GDSSGSQSPLSFGGFGAMLRHLDRLQQGIHEALAQRQLNQAALALLQPYQPNLAVTWLFQKAMIPPLQNKSWDPNSINRL
LSRVFAAMFAAGPQVVKPFLQDVVQFGGLAQALWGAMSRDPRLVAGLLPRLGLPELVEWAGHFGALGLYELLQRLTDRPE
PETNPQDYFWRRRREAWRYGCGRDYLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57152; Mature: 57021

Theoretical pI: Translated: 7.83; Mature: 7.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEFVPPPEALPTLDRWWGSLRQPQAELPPAVVHPSSARLGSQSWDADVVIAGGTLGILL
CCCCCCCCHHCCCHHHHHHHHCCCHHHCCCCEECCCCCCCCCCCCCCCEEEECCHHHHHH
GAALAKRGWRVILLERGILRGREQEWNTSHQELQVLLELELLTPPEWEAVQVTHYPRGRI
HHHHHHCCCEEEEEECHHHCCCCHHCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCC
GFGEGPHWWVEGVLNVGVDPVSLLEFLKQHFLAWGGQVWEQTAFQSATVHPDGICLQTTK
CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCEEEECCC
GQIRAQLLVDAMGHRSPIAAQARQGQPPDSVCLVVGSCAQGLPDQPTGDLFYSFTPAQNG
HHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHEEEEEHHHCCCCCCCCCCEEEEECCCCCC
YQPFWEAFPARDGRTTYLFTYCDRDPRRPSLEQLWRDYCRLLPAYQGVELAQIRWVRKLC
CCHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCHHCCCHHHHHHHHHHHH
GVFPAYRRSPLQLPWDRLLAVGDSSGSQSPLSFGGFGAMLRHLDRLQQGIHEALAQRQLN
HHCHHHCCCCCCCCHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QAALALLQPYQPNLAVTWLFQKAMIPPLQNKSWDPNSINRLLSRVFAAMFAAGPQVVKPF
HHHHHHHCCCCCCEEEHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
LQDVVQFGGLAQALWGAMSRDPRLVAGLLPRLGLPELVEWAGHFGALGLYELLQRLTDRP
HHHHHHHCCHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCC
EPETNPQDYFWRRRREAWRYGCGRDYLF
CCCCCCHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AEFVPPPEALPTLDRWWGSLRQPQAELPPAVVHPSSARLGSQSWDADVVIAGGTLGILL
CCCCCCCHHCCCHHHHHHHHCCCHHHCCCCEECCCCCCCCCCCCCCCEEEECCHHHHHH
GAALAKRGWRVILLERGILRGREQEWNTSHQELQVLLELELLTPPEWEAVQVTHYPRGRI
HHHHHHCCCEEEEEECHHHCCCCHHCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCC
GFGEGPHWWVEGVLNVGVDPVSLLEFLKQHFLAWGGQVWEQTAFQSATVHPDGICLQTTK
CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCEEEECCC
GQIRAQLLVDAMGHRSPIAAQARQGQPPDSVCLVVGSCAQGLPDQPTGDLFYSFTPAQNG
HHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHEEEEEHHHCCCCCCCCCCEEEEECCCCCC
YQPFWEAFPARDGRTTYLFTYCDRDPRRPSLEQLWRDYCRLLPAYQGVELAQIRWVRKLC
CCHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCHHCCCHHHHHHHHHHHH
GVFPAYRRSPLQLPWDRLLAVGDSSGSQSPLSFGGFGAMLRHLDRLQQGIHEALAQRQLN
HHCHHHCCCCCCCCHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QAALALLQPYQPNLAVTWLFQKAMIPPLQNKSWDPNSINRLLSRVFAAMFAAGPQVVKPF
HHHHHHHCCCCCCEEEHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
LQDVVQFGGLAQALWGAMSRDPRLVAGLLPRLGLPELVEWAGHFGALGLYELLQRLTDRP
HHHHHHHCCHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCC
EPETNPQDYFWRRRREAWRYGCGRDYLF
CCCCCCHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA