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The map label for this gene is upgA [H]

Identifier: 86609912

GI number: 86609912

Start: 2574290

End: 2575342

Strand: Direct

Name: upgA [H]

Synonym: CYB_2478

Alternate gene names: 86609912

Gene position: 2574290-2575342 (Clockwise)

Preceding gene: 86609911

Following gene: 86609913

Centisome position: 84.49

GC content: 57.36

Gene sequence:

>1053_bases
ATGGCGCCCCTGGATTTTTGCACTTTTGAGCCGGAGCGCAAGGCCATCGACATGGCCTTTGGCGTGGGGCTGGTGCTGGC
GGGCATGGCCATTCCCCTCTGGCCGCTGTTGGCGTGGACGCAGAAGGAGCAGGAGCGCCGCCTGGGGATCCCCGGCCCAG
CTGTTCAGGAGAGGGGCATCTTTAAGCAGTGGTGGCTGGCGTGGCTGCTCTTGTTGCCCACCTTCACGATCTTGGTGGTG
TTTCTCTACTATCCGGGGTTGGATACTTTCCGCCTTTCCACCCTGCTCACATTTGTGGGGGCGCCGCGCAGCCGCTTCGT
CTGTGTGGACAATTTCACCGGTCTGCTGACGGATGCTACCTATTTGCATAGCCTCGGCATTACCTTTGCCATTTCGGCGG
CCATTGTGGTGCTGGGGTTGAGCGGATCCCTGTTGATTGCCACGCTGGCCTACCAGCCGATTCGAGGGGCGGCGATTTAT
CGGGTGTTGCTGATCTGGCCCTACGCCATTTCTCCAGCGGTGGCCGGGATCATCTTCTTTATCATGTTCAACCCCTTGGG
AGGGGTGGCCAACCATTTGCTGGGCCTGGTGGGGATCCCCCGTTTAAACTGGCTCAGCGATCCCAACTTGGCCCCTTGGG
TGGTGATTTTTGCCAGCGTTTGGAAGCAGATGGGCTACAACATTTTGTTTTACCTTGCCGGCCTGCAAAACCTGCCCAAG
GATTTGCTGGAAGCGGCTGCCATCGACGGGGCCGGGGCAGTGCGTCGCTTTTTTGCCATCACCCTACCGCTGCTTTCTCC
CATCACCTTCTTTTTGGTGATTACCAACATGACCTATGCGTTTTTCGATATCTTTGGCACCATTGACTTGCTGACTGCTG
GGGGCCCTTCCGGATCCACCTCGGTGTTGATCTACGAGATCTACAAAATCGGAGTGTCTTCAGGCAATTTGGGTAGGGCT
GCCGCGCAATCCATCGTCCTGTTTCTCATTGTGGTGGGGCTGACGATCCTGCAATTTCGCACCACCGAGCGGAATGTAAC
CTACGGCGGATAA

Upstream 100 bases:

>100_bases
ATCCCTCTGGATGGGGCTCCGTTTTCGACGCATCGAGTGGCCTGTGCCGGTGGGGGCAGTGCTGGGGGGCCTAGCAGGAG
GGCTGGGATCCCTGATTTTT

Downstream 100 bases:

>100_bases
CGGCTGTCTCTGCTGCAACGCAATGATCCCAGTTCTCAGTGGGCAAGGGGAAAATCGGCAAGAATGGGGGTAGAGAATCT
AGGGATCCTCGATGGCCCCA

Product: glycerol-3-phosphate ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 349

Protein sequence:

>350_residues
MAPLDFCTFEPERKAIDMAFGVGLVLAGMAIPLWPLLAWTQKEQERRLGIPGPAVQERGIFKQWWLAWLLLLPTFTILVV
FLYYPGLDTFRLSTLLTFVGAPRSRFVCVDNFTGLLTDATYLHSLGITFAISAAIVVLGLSGSLLIATLAYQPIRGAAIY
RVLLIWPYAISPAVAGIIFFIMFNPLGGVANHLLGLVGIPRLNWLSDPNLAPWVVIFASVWKQMGYNILFYLAGLQNLPK
DLLEAAAIDGAGAVRRFFAITLPLLSPITFFLVITNMTYAFFDIFGTIDLLTAGGPSGSTSVLIYEIYKIGVSSGNLGRA
AAQSIVLFLIVVGLTILQFRTTERNVTYGG

Sequences:

>Translated_350_residues
MAPLDFCTFEPERKAIDMAFGVGLVLAGMAIPLWPLLAWTQKEQERRLGIPGPAVQERGIFKQWWLAWLLLLPTFTILVV
FLYYPGLDTFRLSTLLTFVGAPRSRFVCVDNFTGLLTDATYLHSLGITFAISAAIVVLGLSGSLLIATLAYQPIRGAAIY
RVLLIWPYAISPAVAGIIFFIMFNPLGGVANHLLGLVGIPRLNWLSDPNLAPWVVIFASVWKQMGYNILFYLAGLQNLPK
DLLEAAAIDGAGAVRRFFAITLPLLSPITFFLVITNMTYAFFDIFGTIDLLTAGGPSGSTSVLIYEIYKIGVSSGNLGRA
AAQSIVLFLIVVGLTILQFRTTERNVTYGG
>Mature_349_residues
APLDFCTFEPERKAIDMAFGVGLVLAGMAIPLWPLLAWTQKEQERRLGIPGPAVQERGIFKQWWLAWLLLLPTFTILVVF
LYYPGLDTFRLSTLLTFVGAPRSRFVCVDNFTGLLTDATYLHSLGITFAISAAIVVLGLSGSLLIATLAYQPIRGAAIYR
VLLIWPYAISPAVAGIIFFIMFNPLGGVANHLLGLVGIPRLNWLSDPNLAPWVVIFASVWKQMGYNILFYLAGLQNLPKD
LLEAAAIDGAGAVRRFFAITLPLLSPITFFLVITNMTYAFFDIFGTIDLLTAGGPSGSTSVLIYEIYKIGVSSGNLGRAA
AQSIVLFLIVVGLTILQFRTTERNVTYGG

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=293, Percent_Identity=43.0034129692833, Blast_Score=221, Evalue=5e-59,
Organism=Escherichia coli, GI1790465, Length=251, Percent_Identity=34.6613545816733, Blast_Score=111, Evalue=7e-26,
Organism=Escherichia coli, GI1787570, Length=251, Percent_Identity=30.2788844621514, Blast_Score=93, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 38261; Mature: 38130

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPLDFCTFEPERKAIDMAFGVGLVLAGMAIPLWPLLAWTQKEQERRLGIPGPAVQERGI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCH
FKQWWLAWLLLLPTFTILVVFLYYPGLDTFRLSTLLTFVGAPRSRFVCVDNFTGLLTDAT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHH
YLHSLGITFAISAAIVVLGLSGSLLIATLAYQPIRGAAIYRVLLIWPYAISPAVAGIIFF
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IMFNPLGGVANHLLGLVGIPRLNWLSDPNLAPWVVIFASVWKQMGYNILFYLAGLQNLPK
HHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCH
DLLEAAAIDGAGAVRRFFAITLPLLSPITFFLVITNMTYAFFDIFGTIDLLTAGGPSGST
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC
SVLIYEIYKIGVSSGNLGRAAAQSIVLFLIVVGLTILQFRTTERNVTYGG
CEEEEEEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
APLDFCTFEPERKAIDMAFGVGLVLAGMAIPLWPLLAWTQKEQERRLGIPGPAVQERGI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCH
FKQWWLAWLLLLPTFTILVVFLYYPGLDTFRLSTLLTFVGAPRSRFVCVDNFTGLLTDAT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHH
YLHSLGITFAISAAIVVLGLSGSLLIATLAYQPIRGAAIYRVLLIWPYAISPAVAGIIFF
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IMFNPLGGVANHLLGLVGIPRLNWLSDPNLAPWVVIFASVWKQMGYNILFYLAGLQNLPK
HHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCH
DLLEAAAIDGAGAVRRFFAITLPLLSPITFFLVITNMTYAFFDIFGTIDLLTAGGPSGST
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC
SVLIYEIYKIGVSSGNLGRAAAQSIVLFLIVVGLTILQFRTTERNVTYGG
CEEEEEEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11481431 [H]